RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 DOK7Q18PE1 504 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 ZMYM1Q5SVZ6 1142 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 SLC9C2Q5TAH2 1124 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 CWC27Q6UX04 472 aaKnown RBP12.5□□□□□ -0.41
RFC1-211ENST00000509084 NIM1KQ8IY84 436 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 MAST3O60307 1309 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 PSME4Q14997 1843 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 CCDC88AQ3V6T2 1871 aa12.5□□□□□ -0.41
RFC1-211ENST00000509084 MYO3BQ8WXR4 1341 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 LDHBP07195 334 aaKnown RBP12.49□□□□□ -0.41
RFC1-211ENST00000509084 PDE6AP16499 860 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 GTF2IP78347 998 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 GSTO1P78417 241 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 MFSD14BQ5SR56 506 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 DZIP1Q86YF9 867 aaKnown RBP12.49□□□□□ -0.41
RFC1-211ENST00000509084 CERS3Q8IU89 383 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 JDP2Q8WYK2 163 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 DBNDD1Q9H9R9 158 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
RFC1-211ENST00000509084 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
RFC1-211ENST00000509084 ZNF532Q9HCE3 1301 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 A0A0D9SFI3 127 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 USP17L3A6NCW0 530 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 USP17L4A6NCW7 530 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 NAA16Q6N069 864 aaPredicted RBP12.48□□□□□ -0.41
RFC1-211ENST00000509084 USP17L1Q7RTZ2 530 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 MAGEB6Q8N7X4 407 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 FBXW7Q969H0 707 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
RFC1-211ENST00000509084 MYO5AQ9Y4I1 1855 aaKnown RBP12.47□□□□□ -0.41
RFC1-211ENST00000509084 CCDC171Q6TFL3 1326 aa12.47□□□□□ -0.41
RFC1-211ENST00000509084 TCRBV5S4A2TA0A5A2 114 aa12.47□□□□□ -0.41
RFC1-211ENST00000509084 LDHCP07864 332 aa12.47□□□□□ -0.41
RFC1-211ENST00000509084 MCCP23508 829 aa12.47□□□□□ -0.41
RFC1-211ENST00000509084 PRDX5P30044 214 aa12.47□□□□□ -0.41
RFC1-211ENST00000509084 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
RFC1-211ENST00000509084 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
RFC1-211ENST00000509084 CHD4Q14839 1912 aa12.47□□□□□ -0.41
RFC1-211ENST00000509084 GNAT2P19087 354 aa12.46□□□□□ -0.41
RFC1-211ENST00000509084 CYP7A1P22680 504 aa12.46□□□□□ -0.41
RFC1-211ENST00000509084 MECOMQ03112 1051 aa12.46□□□□□ -0.41
RFC1-211ENST00000509084 DACT2Q5SW24 774 aa12.46□□□□□ -0.41
RFC1-211ENST00000509084 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.41
RFC1-211ENST00000509084 AIDAQ96BJ3 306 aa12.46□□□□□ -0.41
RFC1-211ENST00000509084 NSUN4Q96CB9 384 aaKnown RBP12.46□□□□□ -0.41
RFC1-211ENST00000509084 NOL10Q9BSC4 688 aaKnown RBP12.46□□□□□ -0.41
RFC1-211ENST00000509084 JAG2Q9Y219 1238 aa12.46□□□□□ -0.41
RFC1-211ENST00000509084 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
RFC1-211ENST00000509084 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.42
RFC1-211ENST00000509084 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
RFC1-211ENST00000509084 LMNB1P20700 586 aa12.45□□□□□ -0.42
RFC1-211ENST00000509084 MMP14P50281 582 aa12.45□□□□□ -0.42
RFC1-211ENST00000509084 RASSF7Q02833 373 aa12.45□□□□□ -0.42
RFC1-211ENST00000509084 OSBP2Q969R2 916 aa12.45□□□□□ -0.42
RFC1-211ENST00000509084 DSCC1Q9BVC3 393 aa12.45□□□□□ -0.42
RFC1-211ENST00000509084 SCN9AQ15858 1988 aa12.45□□□□□ -0.42
RFC1-211ENST00000509084 COL4A5P29400 1685 aa12.45□□□□□ -0.42
RFC1-211ENST00000509084 RPAP1Q9BWH6 1393 aaPredicted RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 M0R2C6 588 aa12.44□□□□□ -0.42
RFC1-211ENST00000509084 GPAA1O43292 621 aa12.44□□□□□ -0.42
RFC1-211ENST00000509084 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
RFC1-211ENST00000509084 SEC24BO95487 1268 aa12.44□□□□□ -0.42
RFC1-211ENST00000509084 BAG3O95817 575 aa12.44□□□□□ -0.42
RFC1-211ENST00000509084 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 HDLBPQ00341 1268 aaKnown RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 TNIP1Q15025 636 aa12.44□□□□□ -0.42
RFC1-211ENST00000509084 CIAPIN1Q6FI81 312 aa12.44□□□□□ -0.42
RFC1-211ENST00000509084 ZNF589Q86UQ0 364 aaPredicted RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 SEC62Q99442 399 aaKnown RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 LSG1Q9H089 658 aaKnown RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 PUS7LQ9H0K6 701 aaKnown RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 DICER1Q9UPY3 1922 aaKnown RBP12.44□□□□□ -0.42
RFC1-211ENST00000509084 MROH7-TTC4A0A0A0MT08 1334 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 GAKO14976 1311 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 MAGEB6P1A0A0J9YX57 407 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 MBD4O95243 580 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 PLCG2P16885 1265 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
RFC1-211ENST00000509084 EIF6P56537 245 aaKnown RBP12.43□□□□□ -0.42
RFC1-211ENST00000509084 RSBN1LQ6PCB5 846 aaPredicted RBP12.43□□□□□ -0.42
RFC1-211ENST00000509084 CERS5Q8N5B7 392 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 AGBL3Q8NEM8 1001 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 MRIQ9BWK5 157 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 USP26Q9BXU7 913 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 C22orf23Q9BZE7 217 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 IL25Q9H293 177 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 HDAC9Q9UKV0 1011 aa12.43□□□□□ -0.42
RFC1-211ENST00000509084 TTF2Q9UNY4 1162 aaKnown RBP12.43□□□□□ -0.42
RFC1-211ENST00000509084 FZD9O00144 591 aa12.42□□□□□ -0.42
RFC1-211ENST00000509084 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
RFC1-211ENST00000509084 RPS12P25398 132 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms