RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 NECAB3Q96P71 396 aaPredicted RBP4.68□□□□□ -1.66
CCDC30-212ENST00000507855 PLVAPQ9BX97 442 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 NRSN2Q9GZP1 204 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 ADAM19Q9H013 955 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 ADAMTS8Q9UP79 889 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 TCF3P15923 654 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 FAM160A1Q05DH4 1040 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 CCDC85BQ15834 202 aaPredicted RBP4.68□□□□□ -1.66
CCDC30-212ENST00000507855 CLEC4MQ9H2X3 399 aaPredicted RBP4.68□□□□□ -1.66
CCDC30-212ENST00000507855 ACBD3Q9H3P7 528 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 FRRS1LQ9P0K9 344 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 TAF1CQ15572 869 aaPredicted RBP4.67□□□□□ -1.66
CCDC30-212ENST00000507855 GLIPR1L2Q4G1C9 344 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 TEX2Q8IWB9 1127 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 ZSCAN1Q8NBB4 408 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 IPO4Q8TEX9 1081 aaKnown RBP4.67□□□□□ -1.66
CCDC30-212ENST00000507855 SRA1Q9HD15 236 aaKnown RBP4.67□□□□□ -1.66
CCDC30-212ENST00000507855 GPN3Q9UHW5 284 aaPredicted RBP4.67□□□□□ -1.66
CCDC30-212ENST00000507855 ALX3O95076 343 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 CDC27P30260 824 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 GSTT1P30711 240 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 IKBKEQ14164 716 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 AGGF1Q8N302 714 aaeCLIP4.67□□□□□ -1.66
CCDC30-212ENST00000507855 FBXO27Q8NI29 283 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 UBASH3BQ8TF42 649 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 GGT7Q9UJ14 662 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 PPME1Q9Y570 386 aa4.67□□□□□ -1.66
CCDC30-212ENST00000507855 FSCN2O14926 492 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 B3GALT4O96024 378 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 PTPRAP18433 802 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 BMP6P22004 513 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 VAMP1P23763 118 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 CRKP46108 304 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 GSTM4Q03013 218 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 TRAPPC3LQ5T215 181 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 FAM43BQ6ZT52 329 aaPredicted RBP4.66□□□□□ -1.66
CCDC30-212ENST00000507855 PDZD3Q86UT5 571 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 RBSNQ9H1K0 784 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 ADAMTS1Q9UHI8 967 aa4.66□□□□□ -1.66
CCDC30-212ENST00000507855 A0A0A0MRY4 1105 aa4.65□□□□□ -1.66
CCDC30-212ENST00000507855 TFE3P19532 575 aaPredicted RBP4.65□□□□□ -1.66
CCDC30-212ENST00000507855 ZNF76P36508 570 aa4.65□□□□□ -1.66
CCDC30-212ENST00000507855 SEPT6Q14141 434 aa4.65□□□□□ -1.66
CCDC30-212ENST00000507855 ERMP1Q7Z2K6 904 aa4.65□□□□□ -1.66
CCDC30-212ENST00000507855 WFDC8Q8IUA0 241 aa4.65□□□□□ -1.66
CCDC30-212ENST00000507855 TRAK1Q9UPV9 953 aa4.65□□□□□ -1.66
CCDC30-212ENST00000507855 H3BRJ5 948 aa4.65□□□□□ -1.67
CCDC30-212ENST00000507855 NCLP19338 710 aaKnown RBP4.65□□□□□ -1.67
CCDC30-212ENST00000507855 PCNX4Q63HM2 1172 aa4.65□□□□□ -1.67
CCDC30-212ENST00000507855 FBXL19Q6PCT2 694 aa4.65□□□□□ -1.67
CCDC30-212ENST00000507855 BNC2Q6ZN30 1099 aaPredicted RBP4.65□□□□□ -1.67
CCDC30-212ENST00000507855 TTC9Q92623 222 aa4.65□□□□□ -1.67
CCDC30-212ENST00000507855 SCAMP3O14828 347 aaKnown RBP4.64□□□□□ -1.67
CCDC30-212ENST00000507855 MAOBP27338 520 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 PCSK7Q16549 785 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 PRDM16Q9HAZ2 1276 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 PF4P02776 101 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 HMGB1P09429 215 aaKnown RBP4.64□□□□□ -1.67
CCDC30-212ENST00000507855 DRD2P14416 443 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 MAP1SQ66K74 1059 aaPredicted RBP4.64□□□□□ -1.67
CCDC30-212ENST00000507855 TTBK2Q6IQ55 1244 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 SULF2Q8IWU5 870 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 FMR1NBQ8N0W7 255 aaPredicted RBP4.64□□□□□ -1.67
CCDC30-212ENST00000507855 PHC3Q8NDX5 983 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 GAL3ST3Q96A11 431 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 CCDC86Q9H6F5 360 aaKnown RBP4.64□□□□□ -1.67
CCDC30-212ENST00000507855 UBP1Q9NZI7 540 aa4.64□□□□□ -1.67
CCDC30-212ENST00000507855 ZNF862O60290 1169 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 LIG1P18858 919 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 GARTP22102 1010 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 GSK3AP49840 483 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 LIG3P49916 1009 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 INPP5AQ14642 412 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 USP26Q9BXU7 913 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 SRCIN1Q9C0H9 1055 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 PRDM6Q9NQX0 595 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 TMEM39AQ9NV64 488 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 DDX41Q9UJV9 622 aaKnown RBP4.63□□□□□ -1.67
CCDC30-212ENST00000507855 LOC100289279A0A1B0GTE1 492 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 ERCC5P28715 1186 aaPredicted RBP4.63□□□□□ -1.67
CCDC30-212ENST00000507855 ZNF252P-AS1Q0IIN9 211 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 USP48Q86UV5 1035 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 CERS3Q8IU89 383 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 JARID2Q92833 1246 aaPredicted RBP4.63□□□□□ -1.67
CCDC30-212ENST00000507855 RNF34Q969K3 372 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 RHOVQ96L33 236 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 CBX8Q9HC52 389 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 CWC22Q9HCG8 908 aaKnown RBP4.63□□□□□ -1.67
CCDC30-212ENST00000507855 CSADQ9Y600 493 aa4.63□□□□□ -1.67
CCDC30-212ENST00000507855 TLR3O15455 904 aaKnown RBP4.62□□□□□ -1.67
CCDC30-212ENST00000507855 ITGB2P05107 769 aa4.62□□□□□ -1.67
CCDC30-212ENST00000507855 GBP2P32456 591 aaPredicted RBP4.62□□□□□ -1.67
CCDC30-212ENST00000507855 FTSJ3Q8IY81 847 aaKnown RBP4.62□□□□□ -1.67
CCDC30-212ENST00000507855 EAF1Q96JC9 268 aaPredicted RBP4.62□□□□□ -1.67
CCDC30-212ENST00000507855 PCGF6Q9BYE7 350 aa4.62□□□□□ -1.67
CCDC30-212ENST00000507855 LRRC4BQ9NT99 713 aa4.62□□□□□ -1.67
CCDC30-212ENST00000507855 GIPC1O14908 333 aa4.62□□□□□ -1.67
CCDC30-212ENST00000507855 F13A1P00488 732 aa4.62□□□□□ -1.67
CCDC30-212ENST00000507855 UBE3DQ7Z6J8 389 aa4.62□□□□□ -1.67
CCDC30-212ENST00000507855 KCNB2Q92953 911 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms