RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CFAP100Q494V2 611 aa22.3■■□□□ 1.16
NPHP4-210ENST00000506941 CCDC158Q5M9N0 1113 aa22.3■■□□□ 1.16
NPHP4-210ENST00000506941 GLIS2Q9BZE0 524 aaPredicted RBP22.3■■□□□ 1.16
NPHP4-210ENST00000506941 SUGT1Q9Y2Z0 365 aa22.3■■□□□ 1.16
NPHP4-210ENST00000506941 TRAF5O00463 557 aa22.29■■□□□ 1.16
NPHP4-210ENST00000506941 DLGAP5Q15398 846 aa22.29■■□□□ 1.16
NPHP4-210ENST00000506941 ANGEL2Q5VTE6 544 aaKnown RBP22.29■■□□□ 1.16
NPHP4-210ENST00000506941 ZNF512BQ96KM6 892 aaPredicted RBP22.29■■□□□ 1.16
NPHP4-210ENST00000506941 SERPINA10Q9UK55 444 aa22.29■■□□□ 1.16
NPHP4-210ENST00000506941 SPDYE2BA6NHP3 402 aa22.28■■□□□ 1.16
NPHP4-210ENST00000506941 SPDYE6P0CI01 402 aa22.28■■□□□ 1.16
NPHP4-210ENST00000506941 HSPA6P17066 643 aa22.28■■□□□ 1.16
NPHP4-210ENST00000506941 CRKP46108 304 aa22.28■■□□□ 1.16
NPHP4-210ENST00000506941 DLK2Q6UY11 383 aa22.28■■□□□ 1.16
NPHP4-210ENST00000506941 PRMT6Q96LA8 375 aaPredicted RBP22.28■■□□□ 1.16
NPHP4-210ENST00000506941 SNRKQ9NRH2 765 aa22.28■■□□□ 1.16
NPHP4-210ENST00000506941 CDK5RAP2Q96SN8 1893 aa22.28■■□□□ 1.16
NPHP4-210ENST00000506941 IFIT2P09913 472 aaKnown RBP22.27■■□□□ 1.16
NPHP4-210ENST00000506941 RBM5P52756 815 aaKnown RBP eCLIP22.27■■□□□ 1.16
NPHP4-210ENST00000506941 DCPSQ96C86 337 aaKnown RBP22.27■■□□□ 1.16
NPHP4-210ENST00000506941 SCAF8Q9UPN6 1271 aaKnown RBP22.27■■□□□ 1.16
NPHP4-210ENST00000506941 PITPNM2Q9BZ72 1349 aa22.27■■□□□ 1.16
NPHP4-210ENST00000506941 ADM5C9JUS6 153 aa22.26■■□□□ 1.15
NPHP4-210ENST00000506941 LDHBP07195 334 aaKnown RBP22.26■■□□□ 1.15
NPHP4-210ENST00000506941 HDLBPQ00341 1268 aaKnown RBP22.26■■□□□ 1.15
NPHP4-210ENST00000506941 TBC1D9Q6ZT07 1266 aa22.26■■□□□ 1.15
NPHP4-210ENST00000506941 KRT26Q7Z3Y9 468 aa22.26■■□□□ 1.15
NPHP4-210ENST00000506941 USP48Q86UV5 1035 aa22.26■■□□□ 1.15
NPHP4-210ENST00000506941 ZGPATQ8N5A5 531 aaKnown RBP22.26■■□□□ 1.15
NPHP4-210ENST00000506941 ABCF2Q9UG63 623 aa22.26■■□□□ 1.15
NPHP4-210ENST00000506941 MAST3O60307 1309 aa22.26■■□□□ 1.15
NPHP4-210ENST00000506941 DIXDC1Q155Q3 683 aa22.25■■□□□ 1.15
NPHP4-210ENST00000506941 CDC37L1Q7L3B6 337 aa22.25■■□□□ 1.15
NPHP4-210ENST00000506941 TEKT1Q969V4 418 aa22.25■■□□□ 1.15
NPHP4-210ENST00000506941 NDUFB9Q9Y6M9 179 aa22.25■■□□□ 1.15
NPHP4-210ENST00000506941 IGHDP01880 384 aa22.24■■□□□ 1.15
NPHP4-210ENST00000506941 CYP2E1P05181 493 aaPredicted RBP22.24■■□□□ 1.15
NPHP4-210ENST00000506941 ZAP70P43403 619 aa22.24■■□□□ 1.15
NPHP4-210ENST00000506941 APLP1P51693 650 aa22.24■■□□□ 1.15
NPHP4-210ENST00000506941 ZNF384Q8TF68 577 aa22.24■■□□□ 1.15
NPHP4-210ENST00000506941 MRIQ9BWK5 157 aa22.24■■□□□ 1.15
NPHP4-210ENST00000506941 CLRN2A0PK11 232 aa22.23■■□□□ 1.15
NPHP4-210ENST00000506941 HHIPL2Q6UWX4 724 aa22.23■■□□□ 1.15
NPHP4-210ENST00000506941 ZDHHC15Q96MV8 337 aa22.23■■□□□ 1.15
NPHP4-210ENST00000506941 DAGLAQ9Y4D2 1042 aa22.23■■□□□ 1.15
NPHP4-210ENST00000506941 FOCADQ5VW36 1801 aa22.22■■□□□ 1.15
NPHP4-210ENST00000506941 AK9Q5TCS8 1911 aa22.22■■□□□ 1.15
NPHP4-210ENST00000506941 HTRA3P83110 453 aa22.22■■□□□ 1.15
NPHP4-210ENST00000506941 SPTY2D1Q68D10 685 aaPredicted RBP22.22■■□□□ 1.15
NPHP4-210ENST00000506941 APOBEC3HQ6NTF7 200 aaKnown RBP22.22■■□□□ 1.15
NPHP4-210ENST00000506941 SULF1Q8IWU6 871 aa22.22■■□□□ 1.15
NPHP4-210ENST00000506941 GCC1Q96CN9 775 aa22.22■■□□□ 1.15
NPHP4-210ENST00000506941 RWDD1Q9H446 243 aaPredicted RBP22.22■■□□□ 1.15
NPHP4-210ENST00000506941 TDRD3Q9H7E2 651 aaKnown RBP22.22■■□□□ 1.15
NPHP4-210ENST00000506941 MECOMQ03112 1051 aa22.21■■□□□ 1.15
NPHP4-210ENST00000506941 SPDYE2Q495Y8 402 aa22.21■■□□□ 1.15
NPHP4-210ENST00000506941 ERICH6Q7L0X2 663 aa22.21■■□□□ 1.15
NPHP4-210ENST00000506941 DZIP1Q86YF9 867 aaKnown RBP22.21■■□□□ 1.15
NPHP4-210ENST00000506941 PIH1D3Q9NQM4 214 aaKnown RBP22.21■■□□□ 1.15
NPHP4-210ENST00000506941 MYO1BO43795 1136 aa22.2■■□□□ 1.14
NPHP4-210ENST00000506941 CST9Q5W186 159 aa22.2■■□□□ 1.14
NPHP4-210ENST00000506941 APOBEC3FQ8IUX4 373 aaKnown RBP22.2■■□□□ 1.14
NPHP4-210ENST00000506941 SMC5Q8IY18 1101 aa22.2■■□□□ 1.14
NPHP4-210ENST00000506941 ANTXR1Q9H6X2 564 aa22.2■■□□□ 1.14
NPHP4-210ENST00000506941 ZNF70Q9UC06 446 aaPredicted RBP22.2■■□□□ 1.14
NPHP4-210ENST00000506941 OTUD7AQ8TE49 926 aaPredicted RBP22.19■■□□□ 1.14
NPHP4-210ENST00000506941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.19■■□□□ 1.14
NPHP4-210ENST00000506941 NSUN4Q96CB9 384 aaKnown RBP22.19■■□□□ 1.14
NPHP4-210ENST00000506941 VEZTQ9HBM0 779 aa22.19■■□□□ 1.14
NPHP4-210ENST00000506941 GAKO14976 1311 aa22.19■■□□□ 1.14
NPHP4-210ENST00000506941 ATP5JP18859 108 aa22.18■■□□□ 1.14
NPHP4-210ENST00000506941 ANKRD45Q5TZF3 282 aa22.18■■□□□ 1.14
NPHP4-210ENST00000506941 PRAMEF18Q5VWM3 479 aa22.18■■□□□ 1.14
NPHP4-210ENST00000506941 CDCA5Q96FF9 252 aa22.18■■□□□ 1.14
NPHP4-210ENST00000506941 RAI14Q9P0K7 980 aa22.18■■□□□ 1.14
NPHP4-210ENST00000506941 LRP2BPQ9P2M1 347 aa22.18■■□□□ 1.14
NPHP4-210ENST00000506941 PAPPA2Q9BXP8 1791 aa22.17■■□□□ 1.14
NPHP4-210ENST00000506941 MROH7-TTC4A0A0A0MT08 1334 aa22.17■■□□□ 1.14
NPHP4-210ENST00000506941 TMEM88BA6NKF7 163 aa22.17■■□□□ 1.14
NPHP4-210ENST00000506941 CELF2O95319 508 aaKnown RBP22.17■■□□□ 1.14
NPHP4-210ENST00000506941 CACNB3P54284 484 aa22.17■■□□□ 1.14
NPHP4-210ENST00000506941 TSHZ3Q63HK5 1081 aa22.17■■□□□ 1.14
NPHP4-210ENST00000506941 ZNF408Q9H9D4 720 aa22.17■■□□□ 1.14
NPHP4-210ENST00000506941 CREBZFQ9NS37 354 aa22.17■■□□□ 1.14
NPHP4-210ENST00000506941 OTOFQ9HC10 1997 aa22.17■■□□□ 1.14
NPHP4-210ENST00000506941 SALL3Q9BXA9 1300 aa22.16■■□□□ 1.14
NPHP4-210ENST00000506941 EDC3Q96F86 508 aaKnown RBP22.16■■□□□ 1.14
NPHP4-210ENST00000506941 FAM163AQ96GL9 167 aaPredicted RBP22.16■■□□□ 1.14
NPHP4-210ENST00000506941 DNAJC2Q99543 621 aaKnown RBP22.16■■□□□ 1.14
NPHP4-210ENST00000506941 BOLA2Q9H3K6 86 aa22.16■■□□□ 1.14
NPHP4-210ENST00000506941 ECHDC1Q9NTX5 307 aa22.16■■□□□ 1.14
NPHP4-210ENST00000506941 CNTNAP1P78357 1384 aa22.15■■□□□ 1.14
NPHP4-210ENST00000506941 CDC42EP5Q6NZY7 148 aa22.15■■□□□ 1.14
NPHP4-210ENST00000506941 HAUS7Q99871 368 aa22.15■■□□□ 1.14
NPHP4-210ENST00000506941 DEFB129Q9H1M3 183 aa22.15■■□□□ 1.14
NPHP4-210ENST00000506941 SSC5DA1L4H1 1573 aa22.15■■□□□ 1.14
NPHP4-210ENST00000506941 PCNTO95613 3336 aa22.14■■□□□ 1.14
NPHP4-210ENST00000506941 TCP10L2B9ZVM9 353 aa22.14■■□□□ 1.13
NPHP4-210ENST00000506941 GOLIM4O00461 696 aa22.14■■□□□ 1.13
NPHP4-210ENST00000506941 B4GALNT3Q6L9W6 998 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms