RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 KLHDC4Q8TBB5 520 aa20.41■□□□□ 0.86
SNX2-205ENST00000506874 RABL6Q3YEC7 729 aaPredicted RBP20.4■□□□□ 0.86
SNX2-205ENST00000506874 FBXO33Q7Z6M2 555 aa20.4■□□□□ 0.86
SNX2-205ENST00000506874 CDAN1Q8IWY9 1227 aa20.4■□□□□ 0.86
SNX2-205ENST00000506874 ANKRD13AQ8IZ07 590 aa20.4■□□□□ 0.86
SNX2-205ENST00000506874 ARAP2Q8WZ64 1704 aa20.4■□□□□ 0.86
SNX2-205ENST00000506874 ELP3Q9H9T3 547 aa20.4■□□□□ 0.86
SNX2-205ENST00000506874 OTOFQ9HC10 1997 aa20.39■□□□□ 0.86
SNX2-205ENST00000506874 SLC34A2O95436 690 aa20.39■□□□□ 0.85
SNX2-205ENST00000506874 SSH1Q8WYL5 1049 aa20.39■□□□□ 0.85
SNX2-205ENST00000506874 PTPRCP08575 1304 aa20.38■□□□□ 0.85
SNX2-205ENST00000506874 UNCXA6NJT0 531 aa20.38■□□□□ 0.85
SNX2-205ENST00000506874 CAVIN4Q5BKX8 364 aa20.38■□□□□ 0.85
SNX2-205ENST00000506874 TMEM39BQ9GZU3 492 aa20.38■□□□□ 0.85
SNX2-205ENST00000506874 TRIM17Q9Y577 477 aa20.38■□□□□ 0.85
SNX2-205ENST00000506874 PDE8BO95263 885 aa20.37■□□□□ 0.85
SNX2-205ENST00000506874 BCAMP50895 628 aa20.37■□□□□ 0.85
SNX2-205ENST00000506874 OTUD7BQ6GQQ9 843 aa20.37■□□□□ 0.85
SNX2-205ENST00000506874 OPTNQ96CV9 577 aa20.37■□□□□ 0.85
SNX2-205ENST00000506874 TEPSINQ96N21 525 aa20.37■□□□□ 0.85
SNX2-205ENST00000506874 E9PSI1 815 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 TNNI2P48788 182 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 CACNB3P54284 484 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 CRHR2Q13324 411 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 VGLL2Q8N8G2 317 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 PTPN18Q99952 460 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 USP44Q9H0E7 712 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 LAMB1P07942 1786 aa20.36■□□□□ 0.85
SNX2-205ENST00000506874 SLFN5Q08AF3 891 aa20.35■□□□□ 0.85
SNX2-205ENST00000506874 OTOP1Q7RTM1 612 aa20.35■□□□□ 0.85
SNX2-205ENST00000506874 TBC1D22AQ8WUA7 517 aa20.35■□□□□ 0.85
SNX2-205ENST00000506874 TEKT1Q969V4 418 aa20.35■□□□□ 0.85
SNX2-205ENST00000506874 CDCA7LQ96GN5 454 aa20.35■□□□□ 0.85
SNX2-205ENST00000506874 MAP3K9P80192 1104 aa20.34■□□□□ 0.85
SNX2-205ENST00000506874 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.34■□□□□ 0.85
SNX2-205ENST00000506874 CD99L2Q8TCZ2 262 aa20.34■□□□□ 0.85
SNX2-205ENST00000506874 IFIT1P09914 478 aaKnown RBP20.33■□□□□ 0.85
SNX2-205ENST00000506874 VGLL4Q14135 290 aa20.33■□□□□ 0.85
SNX2-205ENST00000506874 ERO1AQ96HE7 468 aa20.33■□□□□ 0.85
SNX2-205ENST00000506874 HDLBPQ00341 1268 aaKnown RBP20.32■□□□□ 0.84
SNX2-205ENST00000506874 PUM3Q15397 648 aaKnown RBP20.32■□□□□ 0.84
SNX2-205ENST00000506874 TMOD2Q9NZR1 351 aa20.32■□□□□ 0.84
SNX2-205ENST00000506874 CSADQ9Y600 493 aa20.32■□□□□ 0.84
SNX2-205ENST00000506874 TESPA1A2RU30 521 aaPredicted RBP20.31■□□□□ 0.84
SNX2-205ENST00000506874 EYA2O00167 538 aa20.31■□□□□ 0.84
SNX2-205ENST00000506874 OTUD5Q96G74 571 aa20.31■□□□□ 0.84
SNX2-205ENST00000506874 MS4A4AQ96JQ5 239 aa20.31■□□□□ 0.84
SNX2-205ENST00000506874 SMC4Q9NTJ3 1288 aa20.31■□□□□ 0.84
SNX2-205ENST00000506874 MYH13Q9UKX3 1938 aa20.31■□□□□ 0.84
SNX2-205ENST00000506874 KIAA0100Q14667 2235 aaKnown RBP20.3■□□□□ 0.84
SNX2-205ENST00000506874 CCL15-CCL14A0A0B4J2E2 113 aa20.3■□□□□ 0.84
SNX2-205ENST00000506874 SLC5A1P13866 664 aa20.3■□□□□ 0.84
SNX2-205ENST00000506874 FGFR2P21802 821 aa20.3■□□□□ 0.84
SNX2-205ENST00000506874 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
SNX2-205ENST00000506874 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
SNX2-205ENST00000506874 SP3Q02447 781 aa20.3■□□□□ 0.84
SNX2-205ENST00000506874 CCL15Q16663 113 aa20.3■□□□□ 0.84
SNX2-205ENST00000506874 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.3■□□□□ 0.84
SNX2-205ENST00000506874 BRI3BPQ8WY22 251 aa20.3■□□□□ 0.84
SNX2-205ENST00000506874 ZDHHC15Q96MV8 337 aa20.3■□□□□ 0.84
SNX2-205ENST00000506874 GTF2A2P52657 109 aa20.29■□□□□ 0.84
SNX2-205ENST00000506874 TAF1CQ15572 869 aaPredicted RBP20.29■□□□□ 0.84
SNX2-205ENST00000506874 APOBEC3HQ6NTF7 200 aaKnown RBP20.29■□□□□ 0.84
SNX2-205ENST00000506874 TRMT2AQ8IZ69 625 aaKnown RBP20.29■□□□□ 0.84
SNX2-205ENST00000506874 EFCC1Q9HA90 598 aa20.29■□□□□ 0.84
SNX2-205ENST00000506874 PTPN22Q9Y2R2 807 aa20.29■□□□□ 0.84
SNX2-205ENST00000506874 MAST3O60307 1309 aa20.28■□□□□ 0.84
SNX2-205ENST00000506874 AK9Q5TCS8 1911 aa20.28■□□□□ 0.84
SNX2-205ENST00000506874 CAP1Q01518 475 aa20.28■□□□□ 0.84
SNX2-205ENST00000506874 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
SNX2-205ENST00000506874 PRPF38BQ5VTL8 546 aaKnown RBP20.28■□□□□ 0.84
SNX2-205ENST00000506874 SIL1Q9H173 461 aa20.28■□□□□ 0.84
SNX2-205ENST00000506874 FAM43AQ8N2R8 423 aa20.27■□□□□ 0.84
SNX2-205ENST00000506874 LPIN2Q92539 896 aa20.27■□□□□ 0.84
SNX2-205ENST00000506874 ZKSCAN4Q969J2 545 aaPredicted RBP20.27■□□□□ 0.84
SNX2-205ENST00000506874 WRNIP1Q96S55 665 aa20.27■□□□□ 0.84
SNX2-205ENST00000506874 MRIQ9BWK5 157 aa20.27■□□□□ 0.84
SNX2-205ENST00000506874 ZFYVE28Q9HCC9 887 aa20.27■□□□□ 0.84
SNX2-205ENST00000506874 SUGT1Q9Y2Z0 365 aa20.27■□□□□ 0.84
SNX2-205ENST00000506874 KIF16BQ96L93 1317 aa20.27■□□□□ 0.83
SNX2-205ENST00000506874 POTEFA5A3E0 1075 aa20.26■□□□□ 0.83
SNX2-205ENST00000506874 UBTFL1P0CB47 393 aaPredicted RBP20.26■□□□□ 0.83
SNX2-205ENST00000506874 HHIPL2Q6UWX4 724 aa20.26■□□□□ 0.83
SNX2-205ENST00000506874 ATG9AQ7Z3C6 839 aa20.26■□□□□ 0.83
SNX2-205ENST00000506874 FAM83AQ86UY5 434 aa20.26■□□□□ 0.83
SNX2-205ENST00000506874 WDR66Q8TBY9 1149 aa20.26■□□□□ 0.83
SNX2-205ENST00000506874 SNCAIPQ9Y6H5 919 aa20.26■□□□□ 0.83
SNX2-205ENST00000506874 HTTP42858 3142 aa20.26■□□□□ 0.83
SNX2-205ENST00000506874 SPDYE5A6NIY4 337 aa20.25■□□□□ 0.83
SNX2-205ENST00000506874 MIGA2Q7L4E1 593 aa20.25■□□□□ 0.83
SNX2-205ENST00000506874 DIXDC1Q155Q3 683 aa20.24■□□□□ 0.83
SNX2-205ENST00000506874 ATP2B3Q16720 1220 aa20.24■□□□□ 0.83
SNX2-205ENST00000506874 FKBP1CQ5VVH2 108 aa20.24■□□□□ 0.83
SNX2-205ENST00000506874 DCAF15Q66K64 600 aa20.24■□□□□ 0.83
SNX2-205ENST00000506874 INTS3Q68E01 1043 aaKnown RBP20.24■□□□□ 0.83
SNX2-205ENST00000506874 ERO1BQ86YB8 467 aa20.24■□□□□ 0.83
SNX2-205ENST00000506874 HOOK2Q96ED9 719 aa20.24■□□□□ 0.83
SNX2-205ENST00000506874 CEP126Q9P2H0 1117 aa20.24■□□□□ 0.83
SNX2-205ENST00000506874 NOB1Q9ULX3 412 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms