RNA–Protein interactions for RNA: ENST00000506360.5

SH3TC1-210, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 5,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-210ENST00000506360 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
SH3TC1-210ENST00000506360 RAB3GAP1Q15042 981 aa18.28■□□□□ 0.52
SH3TC1-210ENST00000506360 TAF12Q16514 161 aa18.28■□□□□ 0.52
SH3TC1-210ENST00000506360 ZNF569Q5MCW4 686 aa18.28■□□□□ 0.52
SH3TC1-210ENST00000506360 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
SH3TC1-210ENST00000506360 TTC14Q96N46 770 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 DENND2AQ9ULE3 1009 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 RAD50Q92878 1312 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 VWA3AA6NCI4 1184 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 ZNF174Q15697 407 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 NAP1L4Q99733 375 aaKnown RBP18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 ZBTB16Q05516 673 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 PPP1R7Q15435 360 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 LETM2Q2VYF4 491 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 PPP1R9BQ96SB3 815 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 TXNDC16Q9P2K2 825 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 RSPH14Q9UHP6 348 aa18.27■□□□□ 0.52
SH3TC1-210ENST00000506360 SLU7O95391 586 aaKnown RBP18.27■□□□□ 0.51
SH3TC1-210ENST00000506360 CCDC114Q96M63 670 aa18.27■□□□□ 0.51
SH3TC1-210ENST00000506360 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.27■□□□□ 0.51
SH3TC1-210ENST00000506360 V9GYY5 206 aaPredicted RBP18.27■□□□□ 0.51
SH3TC1-210ENST00000506360 GNPATO15228 680 aa18.27■□□□□ 0.51
SH3TC1-210ENST00000506360 RNMTO43148 476 aaKnown RBP18.27■□□□□ 0.51
SH3TC1-210ENST00000506360 SV2BQ7L1I2 683 aa18.27■□□□□ 0.51
SH3TC1-210ENST00000506360 IFT81Q8WYA0 676 aa18.27■□□□□ 0.51
SH3TC1-210ENST00000506360 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 SMC6Q96SB8 1091 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 HELLSQ9NRZ9 838 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 VAMP4O75379 141 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 RPL13P26373 211 aaKnown RBP18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 CCDC65Q8IXS2 484 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 GPCPD1Q9NPB8 672 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 LUC7L2Q9Y383 392 aaKnown RBP18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 SOS1Q07889 1333 aaPredicted RBP18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 TUBB4AP04350 444 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 MSL1Q68DK7 614 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 CCDC25Q86WR0 208 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 TEX11Q8IYF3 940 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 ANKS4BQ8N8V4 417 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 FRMD4BQ9Y2L6 1034 aa18.26■□□□□ 0.51
SH3TC1-210ENST00000506360 CHMLP26374 656 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 PSMC4P43686 418 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 KRT5P13647 590 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 ATP2A2P16615 1042 aaKnown RBP18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 FAM169AQ9Y6X4 670 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 ABCC1P33527 1531 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 HARSP12081 509 aaKnown RBP18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 MNAT1P51948 309 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 EYA1Q99502 592 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 MAK16Q9BXY0 300 aaKnown RBP18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 GPATCH11Q8N954 259 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 CTNND2Q9UQB3 1225 aa18.25■□□□□ 0.51
SH3TC1-210ENST00000506360 NPATQ14207 1427 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 DUOX2Q9NRD8 1548 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 CHMP2AO43633 222 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 UFL1O94874 794 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 EPB41P11171 864 aaKnown RBP18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 BIRC3Q13489 604 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 MTRF1LQ9UGC7 380 aaKnown RBP18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 RHOXF2BP0C7M4 288 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 CCT6AP40227 531 aaKnown RBP18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 KIAA1524Q8TCG1 905 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 RHOXF2Q9BQY4 288 aa18.24■□□□□ 0.51
SH3TC1-210ENST00000506360 POLR3AO14802 1390 aaPredicted RBP18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 GCP02774 474 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 SEL1L2Q5TEA6 688 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 FNBP1Q96RU3 617 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 TSGA10Q9BZW7 698 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 GJA3Q9Y6H8 435 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 ELP1O95163 1332 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 IVLP07476 585 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 HOXC9P31274 260 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 CNBD1Q8NA66 436 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 ZBTB9Q96C00 473 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 B4E1Z4 1266 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 TRAF5O00463 557 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 WDR44Q5JSH3 913 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 WDR70Q9NW82 654 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 TLDC2A0PJX2 215 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 MTUS1Q9ULD2 1270 aa18.23■□□□□ 0.51
SH3TC1-210ENST00000506360 A0A1B0GVL5 298 aa18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 ITGA6P23229 1130 aa18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 CCDC14Q49A88 953 aa18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 FAM89AQ96GI7 184 aa18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 KCNK9Q9NPC2 374 aa18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 EIF6P56537 245 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 TNNC1P63316 161 aa18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 SYT10Q6XYQ8 523 aa18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 GPATCH8Q9UKJ3 1502 aaKnown RBP18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 A2MP01023 1474 aa18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 XRCC6P12956 609 aaKnown RBP eCLIP18.22■□□□□ 0.51
SH3TC1-210ENST00000506360 FCHSD1Q86WN1 690 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms