RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 ENOX2Q16206 610 aaKnown RBP9.54□□□□□ -0.88
CHD1-204ENST00000505982 ANKRD34AQ69YU3 496 aa9.54□□□□□ -0.88
CHD1-204ENST00000505982 ALG1LQ6GMV1 187 aa9.54□□□□□ -0.88
CHD1-204ENST00000505982 POP1Q99575 1024 aaKnown RBP9.54□□□□□ -0.88
CHD1-204ENST00000505982 GGNBP2Q9H3C7 697 aa9.54□□□□□ -0.88
CHD1-204ENST00000505982 H3BRJ5 948 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 ADAM11O75078 769 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 BMP3P12645 472 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 PIP4K2BP78356 416 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 ORC1Q13415 861 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 PDE12Q6L8Q7 609 aaKnown RBP9.53□□□□□ -0.88
CHD1-204ENST00000505982 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.53□□□□□ -0.88
CHD1-204ENST00000505982 BEND4Q6ZU67 534 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 UBASH3BQ8TF42 649 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 CSRNP1Q96S65 589 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 SETDB2Q96T68 719 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 RNF208Q9H0X6 261 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 OSGEPQ9NPF4 335 aa9.53□□□□□ -0.88
CHD1-204ENST00000505982 SORBS3O60504 671 aa9.52□□□□□ -0.89
CHD1-204ENST00000505982 ADAMTS4O75173 837 aa9.52□□□□□ -0.89
CHD1-204ENST00000505982 SHKBP1Q8TBC3 707 aa9.52□□□□□ -0.89
CHD1-204ENST00000505982 ELP3Q9H9T3 547 aa9.52□□□□□ -0.89
CHD1-204ENST00000505982 VTI1BQ9UEU0 232 aa9.52□□□□□ -0.89
CHD1-204ENST00000505982 HIF3AQ9Y2N7 669 aa9.52□□□□□ -0.89
CHD1-204ENST00000505982 EIF1AYO14602 144 aaKnown RBP9.51□□□□□ -0.89
CHD1-204ENST00000505982 MRPL58Q14197 206 aaKnown RBP9.51□□□□□ -0.89
CHD1-204ENST00000505982 BACH2Q9BYV9 841 aa9.51□□□□□ -0.89
CHD1-204ENST00000505982 FDX2Q6P4F2 183 aa9.5□□□□□ -0.89
CHD1-204ENST00000505982 TMC4Q7Z404 712 aa9.5□□□□□ -0.89
CHD1-204ENST00000505982 ZNF438Q7Z4V0 828 aa9.5□□□□□ -0.89
CHD1-204ENST00000505982 RNF19AQ9NV58 838 aa9.5□□□□□ -0.89
CHD1-204ENST00000505982 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 CPNE3O75131 537 aaKnown RBP9.49□□□□□ -0.89
CHD1-204ENST00000505982 PREPP48147 710 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 ARL4DP49703 201 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 DAB2P98082 770 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 TMEM87AQ8NBN3 555 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 GIMAP7Q8NHV1 300 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 FBF1Q8TES7 1133 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 RUSC1Q9BVN2 902 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 TMEM63CQ9P1W3 806 aa9.49□□□□□ -0.89
CHD1-204ENST00000505982 WDR64B1ANS9 1081 aa9.48□□□□□ -0.89
CHD1-204ENST00000505982 DNAJC25Q9H1X3 360 aa9.48□□□□□ -0.89
CHD1-204ENST00000505982 USP35Q9P2H5 1018 aa9.48□□□□□ -0.89
CHD1-204ENST00000505982 KANSL3Q9P2N6 904 aa9.48□□□□□ -0.89
CHD1-204ENST00000505982 SALL4Q9UJQ4 1053 aa9.48□□□□□ -0.89
CHD1-204ENST00000505982 SCAMP3O14828 347 aaKnown RBP9.47□□□□□ -0.89
CHD1-204ENST00000505982 GAS2O43903 313 aaKnown RBP9.47□□□□□ -0.89
CHD1-204ENST00000505982 GNA15P30679 374 aa9.47□□□□□ -0.89
CHD1-204ENST00000505982 NLRP12P59046 1061 aa9.47□□□□□ -0.89
CHD1-204ENST00000505982 SNX29Q8TEQ0 813 aa9.47□□□□□ -0.89
CHD1-204ENST00000505982 SLC7A3Q8WY07 619 aa9.47□□□□□ -0.89
CHD1-204ENST00000505982 FOXD3Q9UJU5 478 aaPredicted RBP9.47□□□□□ -0.89
CHD1-204ENST00000505982 IGSF3O75054 1194 aa9.46□□□□□ -0.9
CHD1-204ENST00000505982 TNFRSF21O75509 655 aa9.46□□□□□ -0.9
CHD1-204ENST00000505982 CES1P23141 567 aa9.46□□□□□ -0.9
CHD1-204ENST00000505982 CNTN3Q9P232 1028 aa9.46□□□□□ -0.9
CHD1-204ENST00000505982 SPG7Q9UQ90 795 aa9.46□□□□□ -0.9
CHD1-204ENST00000505982 MEGF11A6BM72 1044 aa9.45□□□□□ -0.9
CHD1-204ENST00000505982 PDE2AO00408 941 aaPredicted RBP9.45□□□□□ -0.9
CHD1-204ENST00000505982 PHACTR2O75167 634 aa9.45□□□□□ -0.9
CHD1-204ENST00000505982 MFSD14AQ96MC6 490 aa9.45□□□□□ -0.9
CHD1-204ENST00000505982 PIM2Q9P1W9 311 aa9.45□□□□□ -0.9
CHD1-204ENST00000505982 NFKBIEO00221 500 aa9.44□□□□□ -0.9
CHD1-204ENST00000505982 MAP4P27816 1152 aaKnown RBP9.44□□□□□ -0.9
CHD1-204ENST00000505982 ERCC5P28715 1186 aaPredicted RBP9.44□□□□□ -0.9
CHD1-204ENST00000505982 C19orf57Q0VDD7 668 aa9.44□□□□□ -0.9
CHD1-204ENST00000505982 XKR5Q6UX68 686 aa9.44□□□□□ -0.9
CHD1-204ENST00000505982 PMEPA1Q969W9 287 aa9.44□□□□□ -0.9
CHD1-204ENST00000505982 ATG3Q9NT62 314 aa9.44□□□□□ -0.9
CHD1-204ENST00000505982 DZANK1Q9NVP4 752 aa9.44□□□□□ -0.9
CHD1-204ENST00000505982 NLRP2Q9NX02 1062 aa9.44□□□□□ -0.9
CHD1-204ENST00000505982 ADGRE2Q9UHX3 823 aa9.44□□□□□ -0.9
CHD1-204ENST00000505982 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
CHD1-204ENST00000505982 NUTM2GQ5VZR2 741 aa9.43□□□□□ -0.9
CHD1-204ENST00000505982 C1orf127Q8N9H9 656 aa9.43□□□□□ -0.9
CHD1-204ENST00000505982 FRMD6Q96NE9 622 aa9.43□□□□□ -0.9
CHD1-204ENST00000505982 LEMD3Q9Y2U8 911 aa9.43□□□□□ -0.9
CHD1-204ENST00000505982 EIF4BP23588 611 aaKnown RBP9.42□□□□□ -0.9
CHD1-204ENST00000505982 RXRBP28702 533 aa9.42□□□□□ -0.9
CHD1-204ENST00000505982 HOXA10P31260 410 aaPredicted RBP9.42□□□□□ -0.9
CHD1-204ENST00000505982 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
CHD1-204ENST00000505982 USPL1Q5W0Q7 1092 aa9.42□□□□□ -0.9
CHD1-204ENST00000505982 SOX13Q9UN79 622 aa9.42□□□□□ -0.9
CHD1-204ENST00000505982 ANGEL1Q9UNK9 670 aaKnown RBP9.42□□□□□ -0.9
CHD1-204ENST00000505982 ACPPP15309 386 aa9.41□□□□□ -0.9
CHD1-204ENST00000505982 HDLBPQ00341 1268 aaKnown RBP9.41□□□□□ -0.9
CHD1-204ENST00000505982 C12orf50Q8NA57 414 aaPredicted RBP9.41□□□□□ -0.9
CHD1-204ENST00000505982 CCDC74AQ96AQ1 378 aa9.41□□□□□ -0.9
CHD1-204ENST00000505982 ZFYVE28Q9HCC9 887 aa9.41□□□□□ -0.9
CHD1-204ENST00000505982 CYP4F12Q9HCS2 524 aa9.41□□□□□ -0.9
CHD1-204ENST00000505982 AK5Q9Y6K8 562 aa9.41□□□□□ -0.9
CHD1-204ENST00000505982 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.41□□□□□ -0.9
CHD1-204ENST00000505982 ZC3H6P61129 1189 aaKnown RBP9.4□□□□□ -0.9
CHD1-204ENST00000505982 CPSF6Q16630 551 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHD1-204ENST00000505982 SGO2Q562F6 1265 aa9.4□□□□□ -0.9
CHD1-204ENST00000505982 TMEM102Q8N9M5 508 aaPredicted RBP9.4□□□□□ -0.9
CHD1-204ENST00000505982 OSBPL1AQ9BXW6 950 aa9.4□□□□□ -0.9
CHD1-204ENST00000505982 TRPA1O75762 1119 aa9.39□□□□□ -0.91
CHD1-204ENST00000505982 PI16Q6UXB8 463 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms