RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 FAM46AQ96IP4 442 aaKnown RBP6.62□□□□□ -1.35
LINC01088-202ENST00000505149 TMPRSS13Q9BYE2 586 aa6.62□□□□□ -1.35
LINC01088-202ENST00000505149 BCO2Q9BYV7 579 aa6.62□□□□□ -1.35
LINC01088-202ENST00000505149 SYNGAP1Q96PV0 1343 aa6.61□□□□□ -1.35
LINC01088-202ENST00000505149 CYP11A1P05108 521 aa6.61□□□□□ -1.35
LINC01088-202ENST00000505149 MAPK8P45983 427 aa6.61□□□□□ -1.35
LINC01088-202ENST00000505149 NLRP12P59046 1061 aa6.61□□□□□ -1.35
LINC01088-202ENST00000505149 HP1BP3Q5SSJ5 553 aaPredicted RBP6.61□□□□□ -1.35
LINC01088-202ENST00000505149 PI16Q6UXB8 463 aa6.61□□□□□ -1.35
LINC01088-202ENST00000505149 AGGF1Q8N302 714 aaeCLIP6.61□□□□□ -1.35
LINC01088-202ENST00000505149 SMG8Q8ND04 991 aaKnown RBP6.61□□□□□ -1.35
LINC01088-202ENST00000505149 UBL7Q96S82 380 aaPredicted RBP6.61□□□□□ -1.35
LINC01088-202ENST00000505149 ANKRD33BA6NCL7 494 aa6.6□□□□□ -1.35
LINC01088-202ENST00000505149 ITGB7P26010 798 aa6.6□□□□□ -1.35
LINC01088-202ENST00000505149 AP3B2Q13367 1082 aa6.6□□□□□ -1.35
LINC01088-202ENST00000505149 PRR23CQ6ZRP0 262 aa6.6□□□□□ -1.35
LINC01088-202ENST00000505149 C3orf58Q8NDZ4 430 aa6.6□□□□□ -1.35
LINC01088-202ENST00000505149 TRIM56Q9BRZ2 755 aaKnown RBP6.6□□□□□ -1.35
LINC01088-202ENST00000505149 RUSC1Q9BVN2 902 aa6.6□□□□□ -1.35
LINC01088-202ENST00000505149 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
LINC01088-202ENST00000505149 PPM1HQ9ULR3 514 aa6.6□□□□□ -1.35
LINC01088-202ENST00000505149 PRPF40AO75400 957 aaKnown RBP6.59□□□□□ -1.35
LINC01088-202ENST00000505149 TIAF1O95411 115 aa6.59□□□□□ -1.35
LINC01088-202ENST00000505149 GLB1P16278 677 aa6.59□□□□□ -1.35
LINC01088-202ENST00000505149 GSTM4Q03013 218 aa6.59□□□□□ -1.35
LINC01088-202ENST00000505149 EXOSC6Q5RKV6 272 aaKnown RBP6.59□□□□□ -1.35
LINC01088-202ENST00000505149 NXPE4Q6UWF7 544 aa6.59□□□□□ -1.35
LINC01088-202ENST00000505149 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.59□□□□□ -1.35
LINC01088-202ENST00000505149 NPAS4Q8IUM7 802 aa6.59□□□□□ -1.35
LINC01088-202ENST00000505149 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
LINC01088-202ENST00000505149 HIF3AQ9Y2N7 669 aa6.59□□□□□ -1.35
LINC01088-202ENST00000505149 DLGAP3O95886 979 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 LDHBP07195 334 aaKnown RBP6.58□□□□□ -1.36
LINC01088-202ENST00000505149 GSTT1P30711 240 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 DTHD1Q6ZMT9 781 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 ARMC10Q8N2F6 343 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 MYRFLQ96LU7 910 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 OSBPL7Q9BZF2 842 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 SEMA6BQ9H3T3 888 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 CYP4F12Q9HCS2 524 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 WWC3Q9ULE0 1092 aa6.58□□□□□ -1.36
LINC01088-202ENST00000505149 FCGRTP55899 365 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 POU4F3Q15319 338 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 NUTM2GQ5VZR2 741 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 HOMEZQ8IX15 550 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 SETDB2Q96T68 719 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 USP26Q9BXU7 913 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 TMEM39AQ9NV64 488 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 FAM8A1Q9UBU6 413 aa6.57□□□□□ -1.36
LINC01088-202ENST00000505149 DHX15O43143 795 aaKnown RBP6.56□□□□□ -1.36
LINC01088-202ENST00000505149 MAOBP27338 520 aa6.56□□□□□ -1.36
LINC01088-202ENST00000505149 GNA15P30679 374 aa6.56□□□□□ -1.36
LINC01088-202ENST00000505149 PPP2R3AQ06190 1150 aa6.56□□□□□ -1.36
LINC01088-202ENST00000505149 CCDC27Q2M243 656 aa6.56□□□□□ -1.36
LINC01088-202ENST00000505149 EAPPQ56P03 285 aaPredicted RBP6.56□□□□□ -1.36
LINC01088-202ENST00000505149 FDX2Q6P4F2 183 aa6.56□□□□□ -1.36
LINC01088-202ENST00000505149 CORO1BQ9BR76 489 aa6.56□□□□□ -1.36
LINC01088-202ENST00000505149 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
LINC01088-202ENST00000505149 GZF1Q9H116 711 aaPredicted RBP6.56□□□□□ -1.36
LINC01088-202ENST00000505149 RAXQ9Y2V3 346 aa6.56□□□□□ -1.36
LINC01088-202ENST00000505149 GSC2O15499 205 aa6.55□□□□□ -1.36
LINC01088-202ENST00000505149 PREPP48147 710 aa6.55□□□□□ -1.36
LINC01088-202ENST00000505149 PRSS36Q5K4E3 855 aa6.55□□□□□ -1.36
LINC01088-202ENST00000505149 SCARA3Q6AZY7 606 aa6.55□□□□□ -1.36
LINC01088-202ENST00000505149 FBXO33Q7Z6M2 555 aa6.55□□□□□ -1.36
LINC01088-202ENST00000505149 FAM20CQ8IXL6 584 aa6.55□□□□□ -1.36
LINC01088-202ENST00000505149 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
LINC01088-202ENST00000505149 CEP44Q9C0F1 390 aa6.55□□□□□ -1.36
LINC01088-202ENST00000505149 GSX1Q9H4S2 264 aaPredicted RBP6.55□□□□□ -1.36
LINC01088-202ENST00000505149 KRT82Q9NSB4 513 aa6.55□□□□□ -1.36
LINC01088-202ENST00000505149 BTBD11A6QL63 1104 aa6.54□□□□□ -1.36
LINC01088-202ENST00000505149 CTSBP07858 339 aa6.54□□□□□ -1.36
LINC01088-202ENST00000505149 HNRNPUQ00839 825 aaKnown RBP eCLIP6.54□□□□□ -1.36
LINC01088-202ENST00000505149 PDZD3Q86UT5 571 aa6.54□□□□□ -1.36
LINC01088-202ENST00000505149 CLEC10AQ8IUN9 316 aa6.54□□□□□ -1.36
LINC01088-202ENST00000505149 NECAB3Q96P71 396 aaPredicted RBP6.54□□□□□ -1.36
LINC01088-202ENST00000505149 CACNA2D2Q9NY47 1150 aa6.54□□□□□ -1.36
LINC01088-202ENST00000505149 SART1O43290 800 aaKnown RBP6.53□□□□□ -1.36
LINC01088-202ENST00000505149 SOX4Q06945 474 aaPredicted RBP6.53□□□□□ -1.36
LINC01088-202ENST00000505149 FAM83CQ9BQN1 747 aa6.53□□□□□ -1.36
LINC01088-202ENST00000505149 AK5Q9Y6K8 562 aa6.53□□□□□ -1.36
LINC01088-202ENST00000505149 GSTP1P09211 210 aaKnown RBP6.52□□□□□ -1.37
LINC01088-202ENST00000505149 ADH5P11766 374 aa6.52□□□□□ -1.37
LINC01088-202ENST00000505149 FSTP19883 344 aa6.52□□□□□ -1.37
LINC01088-202ENST00000505149 NME2P22392 152 aa6.52□□□□□ -1.37
LINC01088-202ENST00000505149 DAB2P98082 770 aa6.52□□□□□ -1.37
LINC01088-202ENST00000505149 ZNF252P-AS1Q0IIN9 211 aa6.52□□□□□ -1.37
LINC01088-202ENST00000505149 C2CD4AQ8NCU7 369 aaPredicted RBP6.52□□□□□ -1.37
LINC01088-202ENST00000505149 EZH1Q92800 747 aaPredicted RBP6.52□□□□□ -1.37
LINC01088-202ENST00000505149 EMILIN2Q9BXX0 1053 aa6.52□□□□□ -1.37
LINC01088-202ENST00000505149 STOML1Q9UBI4 398 aa6.52□□□□□ -1.37
LINC01088-202ENST00000505149 GPN3Q9UHW5 284 aaPredicted RBP6.52□□□□□ -1.37
LINC01088-202ENST00000505149 AKAP2Q9Y2D5 859 aa6.52□□□□□ -1.37
LINC01088-202ENST00000505149 ZBTB7CA1YPR0 619 aa6.51□□□□□ -1.37
LINC01088-202ENST00000505149 ENC1O14682 589 aa6.51□□□□□ -1.37
LINC01088-202ENST00000505149 ECEL1O95672 775 aa6.51□□□□□ -1.37
LINC01088-202ENST00000505149 USP17L7P0C7H9 530 aa6.51□□□□□ -1.37
LINC01088-202ENST00000505149 BMP3P12645 472 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms