RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 CEP44Q9C0F1 390 aa9.65□□□□□ -0.86
TRAPPC13-207ENST00000505108 ARL4DP49703 201 aa9.64□□□□□ -0.87
TRAPPC13-207ENST00000505108 FANCCQ00597 558 aa9.64□□□□□ -0.87
TRAPPC13-207ENST00000505108 SUZ12Q15022 739 aaKnown RBP9.64□□□□□ -0.87
TRAPPC13-207ENST00000505108 SHISA2Q6UWI4 295 aa9.64□□□□□ -0.87
TRAPPC13-207ENST00000505108 SV2BQ7L1I2 683 aa9.64□□□□□ -0.87
TRAPPC13-207ENST00000505108 ECEL1O95672 775 aa9.63□□□□□ -0.87
TRAPPC13-207ENST00000505108 ELNP15502 786 aa9.63□□□□□ -0.87
TRAPPC13-207ENST00000505108 PPP2R3AQ06190 1150 aa9.63□□□□□ -0.87
TRAPPC13-207ENST00000505108 PRRT3Q5FWE3 981 aa9.63□□□□□ -0.87
TRAPPC13-207ENST00000505108 RASIP1Q5U651 963 aa9.63□□□□□ -0.87
TRAPPC13-207ENST00000505108 F6X3S4 739 aa9.62□□□□□ -0.87
TRAPPC13-207ENST00000505108 SCAMP3O14828 347 aaKnown RBP9.62□□□□□ -0.87
TRAPPC13-207ENST00000505108 WISP1O95388 367 aa9.62□□□□□ -0.87
TRAPPC13-207ENST00000505108 CTSBP07858 339 aa9.62□□□□□ -0.87
TRAPPC13-207ENST00000505108 MAP3K11Q16584 847 aa9.62□□□□□ -0.87
TRAPPC13-207ENST00000505108 UBASH3BQ8TF42 649 aa9.62□□□□□ -0.87
TRAPPC13-207ENST00000505108 NOC4LQ9BVI4 516 aaKnown RBP9.62□□□□□ -0.87
TRAPPC13-207ENST00000505108 DLGAP3O95886 979 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 SPATA31C1P0DKV0 1188 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 SELPP16109 830 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 BMP6P22004 513 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 ZNF76P36508 570 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 HDLBPQ00341 1268 aaKnown RBP9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 C9orf131Q5VYM1 1079 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 SULF2Q8IWU5 870 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 COPRSQ9NQ92 184 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 IGSF5Q9NSI5 407 aa9.61□□□□□ -0.87
TRAPPC13-207ENST00000505108 NME2P22392 152 aa9.6□□□□□ -0.87
TRAPPC13-207ENST00000505108 MAOBP27338 520 aa9.6□□□□□ -0.87
TRAPPC13-207ENST00000505108 PCNX4Q63HM2 1172 aa9.6□□□□□ -0.87
TRAPPC13-207ENST00000505108 PDZD3Q86UT5 571 aa9.6□□□□□ -0.87
TRAPPC13-207ENST00000505108 METTL16Q86W50 562 aaKnown RBP9.6□□□□□ -0.87
TRAPPC13-207ENST00000505108 USP26Q9BXU7 913 aa9.6□□□□□ -0.87
TRAPPC13-207ENST00000505108 LOC100289279A0A1B0GTE1 492 aa9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 ARNTP27540 789 aa9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 GSK3AP49840 483 aa9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 AP3B2Q13367 1082 aa9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 POU4F3Q15319 338 aa9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 IGF2-ASQ6U949 168 aa9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 MPRIPQ6WCQ1 1025 aa9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 GRIN3AQ8TCU5 1115 aa9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 DDX54Q8TDD1 881 aaKnown RBP9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 ZC3H12CQ9C0D7 883 aaKnown RBP9.59□□□□□ -0.87
TRAPPC13-207ENST00000505108 CYP11A1P05108 521 aa9.58□□□□□ -0.88
TRAPPC13-207ENST00000505108 LIG3P49916 1009 aa9.58□□□□□ -0.88
TRAPPC13-207ENST00000505108 TTBK2Q6IQ55 1244 aa9.58□□□□□ -0.88
TRAPPC13-207ENST00000505108 KIAA1211Q6ZU35 1233 aa9.58□□□□□ -0.88
TRAPPC13-207ENST00000505108 ERMP1Q7Z2K6 904 aa9.58□□□□□ -0.88
TRAPPC13-207ENST00000505108 METTL5Q9NRN9 209 aaKnown RBP9.58□□□□□ -0.88
TRAPPC13-207ENST00000505108 GGT7Q9UJ14 662 aa9.58□□□□□ -0.88
TRAPPC13-207ENST00000505108 KRBA1A5PL33 1030 aa9.57□□□□□ -0.88
TRAPPC13-207ENST00000505108 GSTP1P09211 210 aaKnown RBP9.57□□□□□ -0.88
TRAPPC13-207ENST00000505108 TCF3P15923 654 aa9.57□□□□□ -0.88
TRAPPC13-207ENST00000505108 ZNF252P-AS1Q0IIN9 211 aa9.57□□□□□ -0.88
TRAPPC13-207ENST00000505108 DUOXA2Q1HG44 320 aa9.57□□□□□ -0.88
TRAPPC13-207ENST00000505108 RNF34Q969K3 372 aa9.57□□□□□ -0.88
TRAPPC13-207ENST00000505108 KBTBD4Q9NVX7 518 aa9.57□□□□□ -0.88
TRAPPC13-207ENST00000505108 TLR6Q9Y2C9 796 aa9.57□□□□□ -0.88
TRAPPC13-207ENST00000505108 ACAD11Q709F0 780 aa9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 HS2ST1Q7LGA3 356 aa9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 PHC3Q8NDX5 983 aa9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 DCAF11Q8TEB1 546 aa9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 LENG1Q96BZ8 264 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 DCAF5Q96JK2 942 aa9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 CORO1BQ9BR76 489 aa9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 RSRP1Q9BUV0 290 aa9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 CCDC86Q9H6F5 360 aaKnown RBP9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 CBX8Q9HC52 389 aa9.56□□□□□ -0.88
TRAPPC13-207ENST00000505108 RNF225M0QZC1 329 aaPredicted RBP9.55□□□□□ -0.88
TRAPPC13-207ENST00000505108 ALX3O95076 343 aa9.55□□□□□ -0.88
TRAPPC13-207ENST00000505108 ZNF394Q53GI3 561 aa9.55□□□□□ -0.88
TRAPPC13-207ENST00000505108 AGMOQ6ZNB7 445 aa9.55□□□□□ -0.88
TRAPPC13-207ENST00000505108 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.55□□□□□ -0.88
TRAPPC13-207ENST00000505108 AGGF1Q8N302 714 aaeCLIP9.55□□□□□ -0.88
TRAPPC13-207ENST00000505108 MRPL18Q9H0U6 180 aaKnown RBP9.55□□□□□ -0.88
TRAPPC13-207ENST00000505108 EIF4EBP3O60516 100 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 TFE3P19532 575 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 MAP1SQ66K74 1059 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 NT5DC4Q86YG4 428 aa9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 KCNB2Q92953 911 aa9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 WDR89Q96FK6 387 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 TMEM74Q96NL1 305 aa9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 SAMM50Q9Y512 469 aa9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 PCDHB5Q9Y5E4 795 aa9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 PCDHGB7Q9Y5F8 929 aa9.54□□□□□ -0.88
TRAPPC13-207ENST00000505108 MINDY4BA8MYZ0 360 aa9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 F8W735 103 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 ZNF862O60290 1169 aa9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 GBP2P32456 591 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 RPS26P62854 115 aaKnown RBP9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 RASSF7Q02833 373 aa9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 PTPN11Q06124 597 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 KCNMA1Q12791 1236 aa9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 LLGL2Q6P1M3 1020 aa9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 ALYREFQ86V81 257 aaKnown RBP9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 EMILIN2Q9BXX0 1053 aa9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 CACNA2D2Q9NY47 1150 aa9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 USP21Q9UK80 565 aa9.53□□□□□ -0.88
TRAPPC13-207ENST00000505108 CYP8B1Q9UNU6 501 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms