RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 KIF23Q02241 960 aaPredicted RBP18.63■□□□□ 0.57
DDX41-205ENST00000505081 METTL24Q5JXM2 366 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 CYB5R4Q7L1T6 521 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 TBC1D10CQ8IV04 446 aa18.63■□□□□ 0.57
DDX41-205ENST00000505081 XPO4Q9C0E2 1151 aaKnown RBP18.63■□□□□ 0.57
DDX41-205ENST00000505081 UBE2Q2LH0YL09 131 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 SMC2O95347 1197 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 ZFYP08048 801 aaPredicted RBP18.62■□□□□ 0.57
DDX41-205ENST00000505081 POLR3EQ9NVU0 708 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 IFNKQ9P0W0 207 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 CPDO75976 1380 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 STRCP1A6NGW2 1772 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 UBR2Q8IWV8 1755 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 PFKFB1P16118 471 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 ZSCAN20P17040 1043 aaPredicted RBP18.62■□□□□ 0.57
DDX41-205ENST00000505081 PTPN14Q15678 1187 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 HLFQ16534 295 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 AXDND1Q5T1B0 1012 aaPredicted RBP18.62■□□□□ 0.57
DDX41-205ENST00000505081 SYNE3Q6ZMZ3 975 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 KCNG4Q8TDN1 519 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 PHKBQ93100 1093 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 NAT10Q9H0A0 1025 aaKnown RBP18.62■□□□□ 0.57
DDX41-205ENST00000505081 GREM2Q9H772 168 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 ASAP1Q9ULH1 1129 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 PAXBP1Q9Y5B6 917 aa18.62■□□□□ 0.57
DDX41-205ENST00000505081 ANO1Q5XXA6 986 aa18.61■□□□□ 0.57
DDX41-205ENST00000505081 PARP4Q9UKK3 1724 aaKnown RBP18.61■□□□□ 0.57
DDX41-205ENST00000505081 YEATS4O95619 227 aa18.61■□□□□ 0.57
DDX41-205ENST00000505081 APPP05067 770 aa18.61■□□□□ 0.57
DDX41-205ENST00000505081 SLC3A2P08195 630 aaKnown RBP18.61■□□□□ 0.57
DDX41-205ENST00000505081 ZRSR1Q15695 479 aaKnown RBP18.61■□□□□ 0.57
DDX41-205ENST00000505081 SLC9C2Q5TAH2 1124 aa18.61■□□□□ 0.57
DDX41-205ENST00000505081 NYAP1Q6ZVC0 841 aa18.61■□□□□ 0.57
DDX41-205ENST00000505081 SPEF2Q9C093 1822 aa18.61■□□□□ 0.57
DDX41-205ENST00000505081 DHX16O60231 1041 aaKnown RBP18.6■□□□□ 0.57
DDX41-205ENST00000505081 IL2RBP14784 551 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 LRRFIP1Q32MZ4 808 aaKnown RBP18.6■□□□□ 0.57
DDX41-205ENST00000505081 LDHAL6AQ6ZMR3 332 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 TMC6Q7Z403 805 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 CADPS2Q86UW7 1296 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 CCAR2Q8N163 923 aaKnown RBP18.6■□□□□ 0.57
DDX41-205ENST00000505081 MYL10Q9BUA6 226 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 PIH1D3Q9NQM4 214 aaKnown RBP18.6■□□□□ 0.57
DDX41-205ENST00000505081 IDH1O75874 414 aaKnown RBP18.6■□□□□ 0.57
DDX41-205ENST00000505081 RIC1Q4ADV7 1423 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 PCCAP05165 728 aaPredicted RBP18.6■□□□□ 0.57
DDX41-205ENST00000505081 CDC27P30260 824 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 PTPN21Q16825 1174 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 TICAM2Q86XR7 235 aa18.6■□□□□ 0.57
DDX41-205ENST00000505081 B4E1Z4 1266 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 NEMFO60524 1076 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 CSF1RP07333 972 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 ITGA6P23229 1130 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 NKX1-1Q15270 411 aaPredicted RBP18.59■□□□□ 0.57
DDX41-205ENST00000505081 ALG1Q9BT22 464 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 ZNF215Q9UL58 517 aaPredicted RBP18.59■□□□□ 0.57
DDX41-205ENST00000505081 RIPOR2Q9Y4F9 1068 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 LMOD1P29536 600 aaPredicted RBP18.59■□□□□ 0.57
DDX41-205ENST00000505081 ARMCX5Q6P1M9 558 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 BRAPQ7Z569 592 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 MICU3Q86XE3 530 aa18.59■□□□□ 0.57
DDX41-205ENST00000505081 ZHX1Q9UKY1 873 aaPredicted RBP18.59■□□□□ 0.57
DDX41-205ENST00000505081 IGSF3O75054 1194 aa18.58■□□□□ 0.57
DDX41-205ENST00000505081 NCAPHQ15003 741 aa18.58■□□□□ 0.57
DDX41-205ENST00000505081 ZBTB38Q8NAP3 1195 aaPredicted RBP18.58■□□□□ 0.57
DDX41-205ENST00000505081 ATP1A3P13637 1013 aa18.58■□□□□ 0.56
DDX41-205ENST00000505081 ADD2P35612 726 aa18.58■□□□□ 0.56
DDX41-205ENST00000505081 KIF6Q6ZMV9 814 aa18.58■□□□□ 0.56
DDX41-205ENST00000505081 HELBQ8NG08 1087 aaPredicted RBP18.58■□□□□ 0.56
DDX41-205ENST00000505081 CHMP4CQ96CF2 233 aa18.58■□□□□ 0.56
DDX41-205ENST00000505081 CLIC6Q96NY7 704 aa18.58■□□□□ 0.56
DDX41-205ENST00000505081 CNNM1Q9NRU3 951 aa18.58■□□□□ 0.56
DDX41-205ENST00000505081 TMOD3Q9NYL9 352 aa18.58■□□□□ 0.56
DDX41-205ENST00000505081 MYO5AQ9Y4I1 1855 aaKnown RBP18.58■□□□□ 0.56
DDX41-205ENST00000505081 METAP2P50579 478 aaKnown RBP eCLIP18.57■□□□□ 0.563e-6■■■■□ 22.7
DDX41-205ENST00000505081 BRINP3Q76B58 766 aa18.57■□□□□ 0.56
DDX41-205ENST00000505081 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
DDX41-205ENST00000505081 TTLL11Q8NHH1 800 aa18.57■□□□□ 0.56
DDX41-205ENST00000505081 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
DDX41-205ENST00000505081 NLRP12P59046 1061 aa18.57■□□□□ 0.56
DDX41-205ENST00000505081 TRDNQ13061 729 aa18.57■□□□□ 0.56
DDX41-205ENST00000505081 KRT40Q6A162 431 aa18.57■□□□□ 0.56
DDX41-205ENST00000505081 ANGEL1Q9UNK9 670 aaKnown RBP18.57■□□□□ 0.56
DDX41-205ENST00000505081 SNAP23O00161 211 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 PHKA1P46020 1223 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 E4F1Q66K89 784 aaPredicted RBP18.56■□□□□ 0.56
DDX41-205ENST00000505081 ZNF532Q9HCE3 1301 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 PLEKHG2Q9H7P9 1386 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 TNS2Q63HR2 1409 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 COL5A2P05997 1499 aaPredicted RBP18.56■□□□□ 0.56
DDX41-205ENST00000505081 CMA1P23946 247 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 SHC4Q6S5L8 630 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 PIGBQ92521 554 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 OSBPL5Q9H0X9 879 aaPredicted RBP18.56■□□□□ 0.56
DDX41-205ENST00000505081 ZMYM6O95789 1325 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 SH2B2O14492 632 aaPredicted RBP18.56■□□□□ 0.56
DDX41-205ENST00000505081 NPHP1O15259 732 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 SLC39A14Q15043 492 aa18.56■□□□□ 0.56
DDX41-205ENST00000505081 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■■□□ 17.2
DDX41-205ENST00000505081 AKAP11Q9UKA4 1901 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms