RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 MUC3BQ9H195 1237 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 SEC31BQ9NQW1 1179 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 SOX13Q9UN79 622 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 AKAP2Q9Y2D5 859 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 AK5Q9Y6K8 562 aa5.32□□□□□ -1.56
RFC1-209ENST00000504974 GIPC1O14908 333 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 DLGAP3O95886 979 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 RANGAP1P46060 587 aaPredicted RBP5.31□□□□□ -1.56
RFC1-209ENST00000504974 GRIA4P48058 902 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 SPRED3Q2MJR0 410 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 PRR23CQ6ZRP0 262 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 CCNJLQ8IV13 435 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 ARMC10Q8N2F6 343 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 TMEM102Q8N9M5 508 aaPredicted RBP5.31□□□□□ -1.56
RFC1-209ENST00000504974 TMEM87AQ8NBN3 555 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 TCF12Q99081 682 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 BACH2Q9BYV9 841 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 FAM8A1Q9UBU6 413 aa5.31□□□□□ -1.56
RFC1-209ENST00000504974 A0A096LPE4 126 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 TMEM238LA0A1B0GVL6 79 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 A0A1W2PPZ6 126 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 H3BRJ5 948 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 FBXO24O75426 580 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 GSTT1P30711 240 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 MRPL58Q14197 206 aaKnown RBP5.3□□□□□ -1.56
RFC1-209ENST00000504974 GLIS3Q8NEA6 775 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 SRCIN1Q9C0H9 1055 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 ABCB6Q9NP58 842 aa5.3□□□□□ -1.56
RFC1-209ENST00000504974 TTF2Q9UNY4 1162 aaKnown RBP5.3□□□□□ -1.56
RFC1-209ENST00000504974 RECKO95980 971 aa5.29□□□□□ -1.56
RFC1-209ENST00000504974 MEI1Q5TIA1 1274 aa5.29□□□□□ -1.56
RFC1-209ENST00000504974 PRPF40BQ6NWY9 871 aaKnown RBP5.29□□□□□ -1.56
RFC1-209ENST00000504974 FAM117BQ6P1L5 589 aa5.29□□□□□ -1.56
RFC1-209ENST00000504974 Q6ZS46 218 aa5.29□□□□□ -1.56
RFC1-209ENST00000504974 BSNDQ8WZ55 320 aa5.29□□□□□ -1.56
RFC1-209ENST00000504974 CRELD1Q96HD1 420 aa5.29□□□□□ -1.56
RFC1-209ENST00000504974 BHLHE41Q9C0J9 482 aaPredicted RBP5.29□□□□□ -1.56
RFC1-209ENST00000504974 HMX2A2RU54 273 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
RFC1-209ENST00000504974 CTSBP07858 339 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 CTSHP09668 335 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 DRD2P14416 443 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 FSTP19883 344 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 PREPP48147 710 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 ZNF157P51786 506 aaPredicted RBP5.28□□□□□ -1.56
RFC1-209ENST00000504974 CABP4P57796 275 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 IKBKEQ14164 716 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 TPTE2Q6XPS3 522 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 MAP4K3Q8IVH8 894 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 KLHL23Q8NBE8 558 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 USP26Q9BXU7 913 aa5.28□□□□□ -1.56
RFC1-209ENST00000504974 GPN3Q9UHW5 284 aaPredicted RBP5.28□□□□□ -1.56
RFC1-209ENST00000504974 HYAL3O43820 417 aaPredicted RBP5.27□□□□□ -1.57
RFC1-209ENST00000504974 MED26O95402 600 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 ECEL1O95672 775 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 SSTR4P31391 388 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 PIP4K2BP78356 416 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 GSTM4Q03013 218 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 C19orf57Q0VDD7 668 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 ZNF423Q2M1K9 1284 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 ARTNQ5T4W7 220 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 TRIM42Q8IWZ5 723 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 SHISA5Q8N114 240 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 CACTIN-AS1Q8N1I8 211 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 UTP4Q969X6 686 aaKnown RBP5.27□□□□□ -1.57
RFC1-209ENST00000504974 ZNF576Q9H609 170 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 SRA1Q9HD15 236 aaKnown RBP5.27□□□□□ -1.57
RFC1-209ENST00000504974 NISCHQ9Y2I1 1504 aa5.27□□□□□ -1.57
RFC1-209ENST00000504974 ESRRAP11474 423 aaPredicted RBP5.26□□□□□ -1.57
RFC1-209ENST00000504974 XRCC5P13010 732 aaKnown RBP5.26□□□□□ -1.57
RFC1-209ENST00000504974 VAMP1P23763 118 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 PCDH1Q08174 1060 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 TAF1CQ15572 869 aaPredicted RBP5.26□□□□□ -1.57
RFC1-209ENST00000504974 CCDC85BQ15834 202 aaPredicted RBP5.26□□□□□ -1.57
RFC1-209ENST00000504974 C9orf131Q5VYM1 1079 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 C3orf58Q8NDZ4 430 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 FAM46AQ96IP4 442 aaKnown RBP5.26□□□□□ -1.57
RFC1-209ENST00000504974 RUSC1Q9BVN2 902 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 CLEC4MQ9H2X3 399 aaPredicted RBP5.26□□□□□ -1.57
RFC1-209ENST00000504974 ZFP64Q9NPA5 681 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 STOML1Q9UBI4 398 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 RAXQ9Y2V3 346 aa5.26□□□□□ -1.57
RFC1-209ENST00000504974 LOC100289279A0A1B0GTE1 492 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 F6X3S4 739 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 SCAMP3O14828 347 aaKnown RBP5.25□□□□□ -1.57
RFC1-209ENST00000504974 TGFB1P01137 390 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 BMP3P12645 472 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 ITPKAP23677 461 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 ZNF76P36508 570 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 MAP3K11Q16584 847 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 SGO2Q562F6 1265 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 KCNF1Q9H3M0 494 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 C7orf69Q9H7B7 122 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 ZFYVE1Q9HBF4 777 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 OSGEPQ9NPF4 335 aa5.25□□□□□ -1.57
RFC1-209ENST00000504974 TCF3P15923 654 aa5.24□□□□□ -1.57
RFC1-209ENST00000504974 FAAP100Q0VG06 881 aa5.24□□□□□ -1.57
RFC1-209ENST00000504974 C12orf50Q8NA57 414 aaPredicted RBP5.24□□□□□ -1.57
RFC1-209ENST00000504974 CEP44Q9C0F1 390 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms