RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
DDX41-204ENST00000504807 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
DDX41-204ENST00000504807 TNNQ9UQP3 1299 aa16.56■□□□□ 0.24
DDX41-204ENST00000504807 LAMA3Q16787 3333 aa16.55■□□□□ 0.24
DDX41-204ENST00000504807 CRHR2Q13324 411 aa16.55■□□□□ 0.24
DDX41-204ENST00000504807 ZNF804AQ7Z570 1209 aa16.55■□□□□ 0.24
DDX41-204ENST00000504807 NBPF11Q86T75 865 aa16.55■□□□□ 0.24
DDX41-204ENST00000504807 OGFOD1Q8N543 542 aa16.55■□□□□ 0.24
DDX41-204ENST00000504807 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
DDX41-204ENST00000504807 ANGEL1Q9UNK9 670 aaKnown RBP16.55■□□□□ 0.24
DDX41-204ENST00000504807 PTCH2Q9Y6C5 1203 aa16.55■□□□□ 0.24
DDX41-204ENST00000504807 ARAP2Q8WZ64 1704 aa16.54■□□□□ 0.24
DDX41-204ENST00000504807 INHBEP58166 350 aa16.54■□□□□ 0.24
DDX41-204ENST00000504807 SP3Q02447 781 aa16.54■□□□□ 0.24
DDX41-204ENST00000504807 PRMT6Q96LA8 375 aaPredicted RBP16.54■□□□□ 0.24
DDX41-204ENST00000504807 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
DDX41-204ENST00000504807 FAM205AQ6ZU69 1335 aa16.53■□□□□ 0.24
DDX41-204ENST00000504807 SOX1O00570 391 aaPredicted RBP16.53■□□□□ 0.24
DDX41-204ENST00000504807 UBE4AQ14139 1066 aa16.53■□□□□ 0.24
DDX41-204ENST00000504807 LDLRAD1Q5T700 205 aa16.53■□□□□ 0.24
DDX41-204ENST00000504807 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
DDX41-204ENST00000504807 LRCH3Q96II8 777 aa16.53■□□□□ 0.24
DDX41-204ENST00000504807 MROH5Q6ZUA9 1318 aa16.52■□□□□ 0.24
DDX41-204ENST00000504807 CLRN2A0PK11 232 aa16.52■□□□□ 0.24
DDX41-204ENST00000504807 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.24
DDX41-204ENST00000504807 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
DDX41-204ENST00000504807 FBXO33Q7Z6M2 555 aa16.52■□□□□ 0.24
DDX41-204ENST00000504807 CDAN1Q8IWY9 1227 aa16.52■□□□□ 0.24
DDX41-204ENST00000504807 MTMR14Q8NCE2 650 aa16.52■□□□□ 0.24
DDX41-204ENST00000504807 PRO3102Q9H379 93 aa16.52■□□□□ 0.24
DDX41-204ENST00000504807 COL1A1P02452 1464 aaPredicted RBP16.52■□□□□ 0.23
DDX41-204ENST00000504807 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.23
DDX41-204ENST00000504807 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
DDX41-204ENST00000504807 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
DDX41-204ENST00000504807 FGFR2P21802 821 aa16.51■□□□□ 0.23
DDX41-204ENST00000504807 HIBADHP31937 336 aaKnown RBP16.51■□□□□ 0.23
DDX41-204ENST00000504807 FKBP1AP62942 108 aaKnown RBP16.51■□□□□ 0.23
DDX41-204ENST00000504807 DLGAP5Q15398 846 aa16.51■□□□□ 0.23
DDX41-204ENST00000504807 ATG9AQ7Z3C6 839 aa16.51■□□□□ 0.23
DDX41-204ENST00000504807 MIER1Q8N108 512 aa16.51■□□□□ 0.23
DDX41-204ENST00000504807 WNK4Q96J92 1243 aa16.51■□□□□ 0.23
DDX41-204ENST00000504807 CLMNQ96JQ2 1002 aa16.51■□□□□ 0.23
DDX41-204ENST00000504807 UNC80Q8N2C7 3258 aa16.5■□□□□ 0.23
DDX41-204ENST00000504807 PDE8BO95263 885 aa16.5■□□□□ 0.23
DDX41-204ENST00000504807 BCAMP50895 628 aa16.5■□□□□ 0.23
DDX41-204ENST00000504807 METTL24Q5JXM2 366 aa16.5■□□□□ 0.23
DDX41-204ENST00000504807 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
DDX41-204ENST00000504807 MEIS3Q99687 375 aa16.5■□□□□ 0.23
DDX41-204ENST00000504807 DEFB129Q9H1M3 183 aa16.5■□□□□ 0.23
DDX41-204ENST00000504807 ZBTB48P10074 688 aaPredicted RBP16.49■□□□□ 0.23
DDX41-204ENST00000504807 MFSD14BQ5SR56 506 aa16.49■□□□□ 0.23
DDX41-204ENST00000504807 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
DDX41-204ENST00000504807 APOBEC3FQ8IUX4 373 aaKnown RBP16.49■□□□□ 0.23
DDX41-204ENST00000504807 COL25A1Q9BXS0 654 aaPredicted RBP16.49■□□□□ 0.23
DDX41-204ENST00000504807 PA2G4Q9UQ80 394 aaKnown RBP16.48■□□□□ 0.23
DDX41-204ENST00000504807 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
DDX41-204ENST00000504807 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.48■□□□□ 0.23
DDX41-204ENST00000504807 EYA2O00167 538 aa16.47■□□□□ 0.23
DDX41-204ENST00000504807 BCAR3O75815 825 aa16.47■□□□□ 0.23
DDX41-204ENST00000504807 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
DDX41-204ENST00000504807 MMP14P50281 582 aa16.47■□□□□ 0.23
DDX41-204ENST00000504807 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
DDX41-204ENST00000504807 NBPF12Q5TAG4 269 aaPredicted RBP16.47■□□□□ 0.23
DDX41-204ENST00000504807 PTPN18Q99952 460 aa16.47■□□□□ 0.23
DDX41-204ENST00000504807 SIL1Q9H173 461 aa16.47■□□□□ 0.23
DDX41-204ENST00000504807 TDRD3Q9H7E2 651 aaKnown RBP16.47■□□□□ 0.23
DDX41-204ENST00000504807 TTF2Q9UNY4 1162 aaKnown RBP16.47■□□□□ 0.23
DDX41-204ENST00000504807 SHISA4Q96DD7 197 aa16.46■□□□□ 0.23
DDX41-204ENST00000504807 VEZTQ9HBM0 779 aa16.46■□□□□ 0.23
DDX41-204ENST00000504807 ZNF70Q9UC06 446 aaPredicted RBP16.46■□□□□ 0.23
DDX41-204ENST00000504807 OTOFQ9HC10 1997 aa16.46■□□□□ 0.22
DDX41-204ENST00000504807 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
DDX41-204ENST00000504807 GJA5P36382 358 aa16.45■□□□□ 0.22
DDX41-204ENST00000504807 CRKP46108 304 aa16.45■□□□□ 0.22
DDX41-204ENST00000504807 ARHGEF6Q15052 776 aa16.45■□□□□ 0.22
DDX41-204ENST00000504807 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
DDX41-204ENST00000504807 TEPSINQ96N21 525 aa16.45■□□□□ 0.22
DDX41-204ENST00000504807 NR2E3Q9Y5X4 410 aa16.45■□□□□ 0.22
DDX41-204ENST00000504807 RBM5P52756 815 aaKnown RBP eCLIP16.44■□□□□ 0.22
DDX41-204ENST00000504807 CACNB3P54284 484 aa16.44■□□□□ 0.22
DDX41-204ENST00000504807 RASA3Q14644 834 aa16.44■□□□□ 0.22
DDX41-204ENST00000504807 PUM3Q15397 648 aaKnown RBP16.44■□□□□ 0.22
DDX41-204ENST00000504807 DZIP1LQ8IYY4 767 aaKnown RBP16.44■□□□□ 0.22
DDX41-204ENST00000504807 HTATIP2Q9BUP3 242 aa16.44■□□□□ 0.22
DDX41-204ENST00000504807 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
DDX41-204ENST00000504807 SERPINA10Q9UK55 444 aa16.44■□□□□ 0.22
DDX41-204ENST00000504807 ZBTB7BO15156 539 aaPredicted RBP16.43■□□□□ 0.22
DDX41-204ENST00000504807 TRIM27P14373 513 aa16.43■□□□□ 0.22
DDX41-204ENST00000504807 MTFR1Q15390 333 aa16.43■□□□□ 0.22
DDX41-204ENST00000504807 MAP3K11Q16584 847 aa16.43■□□□□ 0.22
DDX41-204ENST00000504807 DEFB123Q8N688 67 aa16.43■□□□□ 0.22
DDX41-204ENST00000504807 A0A1W2PPC1 479 aa16.42■□□□□ 0.22
DDX41-204ENST00000504807 TCP10L2B9ZVM9 353 aa16.42■□□□□ 0.22
DDX41-204ENST00000504807 PPP1R12BO60237 982 aaPredicted RBP16.42■□□□□ 0.22
DDX41-204ENST00000504807 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
DDX41-204ENST00000504807 ADORA1P30542 326 aa16.42■□□□□ 0.22
DDX41-204ENST00000504807 Q7L0L9 218 aa16.42■□□□□ 0.22
DDX41-204ENST00000504807 TMEM39BQ9GZU3 492 aa16.42■□□□□ 0.22
DDX41-204ENST00000504807 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
DDX41-204ENST00000504807 LAMB1P07942 1786 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms