RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 KRT32Q14532 448 aa8.34□□□□□ -1.07
SNX25-202ENST00000504273 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
SNX25-202ENST00000504273 PUS7LQ9H0K6 701 aaKnown RBP8.34□□□□□ -1.07
SNX25-202ENST00000504273 GPHNQ9NQX3 736 aaPredicted RBP8.34□□□□□ -1.07
SNX25-202ENST00000504273 VPS37CA5D8V6 355 aaPredicted RBP8.33□□□□□ -1.08
SNX25-202ENST00000504273 VGLL3A8MV65 326 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 ITGA6P23229 1130 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 ADD1P35611 737 aaKnown RBP8.33□□□□□ -1.08
SNX25-202ENST00000504273 CTSWP56202 376 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 FERMT3Q86UX7 667 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 TBC1D2BQ9UPU7 963 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 PDE4DIPQ5VU43 2346 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 PFKFB2O60825 505 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 EIF5P55010 431 aaKnown RBP8.33□□□□□ -1.08
SNX25-202ENST00000504273 RESTQ13127 1097 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 HSP90AB3PQ58FF7 597 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 DHX32Q7L7V1 743 aaKnown RBP8.33□□□□□ -1.08
SNX25-202ENST00000504273 BRF1Q92994 677 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 BEGAINQ9BUH8 593 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 SALL1Q9NSC2 1324 aa8.33□□□□□ -1.08
SNX25-202ENST00000504273 FKBP4Q02790 459 aaKnown RBP eCLIP8.32□□□□□ -1.08
SNX25-202ENST00000504273 APOBRQ0VD83 1088 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 IFIT5Q13325 482 aaKnown RBP8.32□□□□□ -1.08
SNX25-202ENST00000504273 RNF214Q8ND24 703 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 NSUN7Q8NE18 718 aaKnown RBP8.32□□□□□ -1.08
SNX25-202ENST00000504273 TSPY26PQ9H489 355 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 MKRN1Q9UHC7 482 aaKnown RBP8.32□□□□□ -1.08
SNX25-202ENST00000504273 ZNF831Q5JPB2 1677 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 ERVV-1B6SEH8 477 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 IRS4O14654 1257 aaPredicted RBP8.32□□□□□ -1.08
SNX25-202ENST00000504273 FGFR2P21802 821 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 ITPK1Q13572 414 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 CCDC183Q5T5S1 534 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 CHADLQ6NUI6 762 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 CHST3Q7LGC8 479 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 PIH1D3Q9NQM4 214 aaKnown RBP8.32□□□□□ -1.08
SNX25-202ENST00000504273 DENND2AQ9ULE3 1009 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 THSD7BQ9C0I4 1608 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 AP5Z1O43299 807 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 LIG1P18858 919 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 IL6STP40189 918 aaPredicted RBP8.32□□□□□ -1.08
SNX25-202ENST00000504273 SUSD4Q5VX71 490 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 DDX11Q96FC9 970 aa8.32□□□□□ -1.08
SNX25-202ENST00000504273 EVCP57679 992 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 ANTXR2P58335 489 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 HABP4Q5JVS0 413 aaKnown RBP8.31□□□□□ -1.08
SNX25-202ENST00000504273 TTC39AQ5SRH9 613 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
SNX25-202ENST00000504273 FBXL16Q8N461 479 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 PGBD1Q96JS3 809 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 ZNF512BQ96KM6 892 aaPredicted RBP8.31□□□□□ -1.08
SNX25-202ENST00000504273 TFIP11Q9UBB9 837 aaKnown RBP8.31□□□□□ -1.08
SNX25-202ENST00000504273 AKAP2Q9Y2D5 859 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 ABCC12Q96J65 1359 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 ELP1O95163 1332 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 TCRBV5S4A2TA0A5A2 114 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 SNAP23O00161 211 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 FGAP02671 866 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 FDPSP14324 419 aaKnown RBP8.31□□□□□ -1.08
SNX25-202ENST00000504273 PDIA3P30101 505 aaKnown RBP8.31□□□□□ -1.08
SNX25-202ENST00000504273 ATP2B3Q16720 1220 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 NCOA5Q9HCD5 579 aaKnown RBP8.31□□□□□ -1.08
SNX25-202ENST00000504273 TACC3Q9Y6A5 838 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 PDE8AO60658 829 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 CAMTA2O94983 1202 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 CCDC158Q5M9N0 1113 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 GIMAP6Q6P9H5 292 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 LDHAL6AQ6ZMR3 332 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 SYTL4Q96C24 671 aaPredicted RBP8.31□□□□□ -1.08
SNX25-202ENST00000504273 PRDM4Q9UKN5 801 aa8.31□□□□□ -1.08
SNX25-202ENST00000504273 GLTPD2A6NH11 291 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 PDE8BO95263 885 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 HOXD11P31277 338 aaPredicted RBP8.3□□□□□ -1.08
SNX25-202ENST00000504273 PHKA1P46020 1223 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 MB21D2Q8IYB1 491 aaPredicted RBP8.3□□□□□ -1.08
SNX25-202ENST00000504273 TRMT112Q9UI30 125 aaKnown RBP8.3□□□□□ -1.08
SNX25-202ENST00000504273 HPS5Q9UPZ3 1129 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
SNX25-202ENST00000504273 ADD2P35612 726 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 VEGFBP49765 207 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 METTL24Q5JXM2 366 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 LEO1Q8WVC0 666 aaPredicted RBP8.3□□□□□ -1.08
SNX25-202ENST00000504273 ACSBG1Q96GR2 724 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 ATP6V1DQ9Y5K8 247 aa8.3□□□□□ -1.08
SNX25-202ENST00000504273 ANKRD18BA2A2Z9 1011 aa8.29□□□□□ -1.08
SNX25-202ENST00000504273 GTF2E1P29083 439 aaPredicted RBP8.29□□□□□ -1.08
SNX25-202ENST00000504273 CRKLP46109 303 aaKnown RBP8.29□□□□□ -1.08
SNX25-202ENST00000504273 HAND2P61296 217 aa8.29□□□□□ -1.08
SNX25-202ENST00000504273 CCT2P78371 535 aaKnown RBP8.29□□□□□ -1.08
SNX25-202ENST00000504273 HELBQ8NG08 1087 aaPredicted RBP8.29□□□□□ -1.08
SNX25-202ENST00000504273 APPBP2Q92624 585 aa8.29□□□□□ -1.08
SNX25-202ENST00000504273 MCOLN1Q9GZU1 580 aa8.29□□□□□ -1.08
SNX25-202ENST00000504273 SEC31BQ9NQW1 1179 aa8.29□□□□□ -1.08
SNX25-202ENST00000504273 RASSF10A6NK89 507 aa8.29□□□□□ -1.08
SNX25-202ENST00000504273 PPFIA3O75145 1194 aa8.29□□□□□ -1.08
SNX25-202ENST00000504273 HMGB1P09429 215 aaKnown RBP8.29□□□□□ -1.08
SNX25-202ENST00000504273 HCLS1P14317 486 aaPredicted RBP8.29□□□□□ -1.08
SNX25-202ENST00000504273 CCDC102BQ68D86 513 aa8.29□□□□□ -1.08
SNX25-202ENST00000504273 SYAP1Q96A49 352 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms