RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 ANKRD44Q8N8A2 993 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
PDLIM5-207ENST00000503974 NPHP1O15259 732 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 COL4A1P02462 1669 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 GNAI2P04899 355 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 TTLL11Q8NHH1 800 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 BICC1Q9H694 974 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 ANAPC4Q9UJX5 808 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 LRRFIP2Q9Y608 721 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 TGFB2P61812 414 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 NCBP1Q09161 790 aaKnown RBP11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 FOXD4L6Q3SYB3 417 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 TTC31Q49AM3 519 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 FOXD4L3Q6VB84 417 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
PDLIM5-207ENST00000503974 LRRC37AA6NMS7 1700 aa11.27□□□□□ -0.6
PDLIM5-207ENST00000503974 RIOK3O14730 519 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-207ENST00000503974 SEC24BO95487 1268 aa11.27□□□□□ -0.61
PDLIM5-207ENST00000503974 SRGNP10124 158 aa11.27□□□□□ -0.61
PDLIM5-207ENST00000503974 ANKRD20A12PQ8NF67 263 aa11.27□□□□□ -0.61
PDLIM5-207ENST00000503974 ERCC4Q92889 916 aaPredicted RBP11.27□□□□□ -0.61
PDLIM5-207ENST00000503974 GBP4Q96PP9 640 aa11.27□□□□□ -0.61
PDLIM5-207ENST00000503974 CEP89Q96ST8 783 aa11.27□□□□□ -0.61
PDLIM5-207ENST00000503974 RBSNQ9H1K0 784 aa11.27□□□□□ -0.61
PDLIM5-207ENST00000503974 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.27□□□□□ -0.612e-8■■■■□ 25.8
PDLIM5-207ENST00000503974 DDIT3P35638 169 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 MYBPC2Q14324 1141 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 LCMT1Q9UIC8 334 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 FAM163BP0C2L3 166 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 STYK1Q6J9G0 422 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 LMBR1LQ6UX01 489 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 PACS2Q86VP3 889 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 KLHL23Q8NBE8 558 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 TATDN2Q93075 761 aa11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 CCDC97Q96F63 343 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-207ENST00000503974 TAF1P21675 1872 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 NPR1P16066 1061 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 KCNA3P22001 575 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 SF3A1Q15459 793 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 E2F4Q16254 413 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 CEP85Q6P2H3 762 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 TBC1D32Q96NH3 1257 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 CRAMP1Q96RY5 1269 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 C1orf115Q9H7X2 142 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 CACNA1SQ13698 1873 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 A0A1B0GUL6 1792 aa11.25□□□□□ -0.61
PDLIM5-207ENST00000503974 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 CAND2O75155 1236 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 NEFHP12036 1026 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 RFX5P48382 616 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 KLHL40Q2TBA0 621 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 TXLNBQ8N3L3 684 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 MASTLQ96GX5 879 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 FHDC1Q9C0D6 1143 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 GREM2Q9H772 168 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 SUDS3Q9H7L9 328 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 SPEF2Q9C093 1822 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 ARFGEF1Q9Y6D6 1849 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 H0YIN7 160 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 CHRNA5P30532 468 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 POLA2Q14181 598 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 RPAP2Q8IXW5 612 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 SSH3Q8TE77 659 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
PDLIM5-207ENST00000503974 GOLGA6CA6NDK9 693 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 GOLGA6BA6NDN3 693 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 GOLGA6DP0CG33 693 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 DPEP1P16444 411 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 ITGA6P23229 1130 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 IRX1P78414 480 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 SRLQ86TD4 932 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 SDR16C5Q8N3Y7 309 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 RPGRQ92834 1020 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 RBM17Q96I25 401 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 ETAA1Q9NY74 926 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 GOLGA6AQ9NYA3 693 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 LTBP1Q14766 1721 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 SLX4Q8IY92 1834 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 PNMA6EA0A0J9YXQ4 647 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 CD151P48509 253 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 GRAPQ13588 217 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 SIRT2Q8IXJ6 389 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 IRAK4Q9NWZ3 460 aa11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 PPP1R1BQ9UD71 204 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-207ENST00000503974 SNED1Q8TER0 1413 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms