RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NR2E3Q9Y5X4 410 aa20.25■□□□□ 0.83
PDLIM7-210ENST00000503827 PRO3102Q9H379 93 aa20.24■□□□□ 0.83
PDLIM7-210ENST00000503827 SERPINA10Q9UK55 444 aa20.24■□□□□ 0.83
PDLIM7-210ENST00000503827 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
PDLIM7-210ENST00000503827 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
PDLIM7-210ENST00000503827 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
PDLIM7-210ENST00000503827 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
PDLIM7-210ENST00000503827 TCP10L2B9ZVM9 353 aa20.22■□□□□ 0.83
PDLIM7-210ENST00000503827 BTBD19C9JJ37 291 aa20.22■□□□□ 0.83
PDLIM7-210ENST00000503827 HOXD10P28358 340 aa20.22■□□□□ 0.83
PDLIM7-210ENST00000503827 GJA8P48165 433 aa20.22■□□□□ 0.83
PDLIM7-210ENST00000503827 GCKRQ14397 625 aa20.22■□□□□ 0.83
PDLIM7-210ENST00000503827 TMEM39BQ9GZU3 492 aa20.22■□□□□ 0.83
PDLIM7-210ENST00000503827 TTF2Q9UNY4 1162 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-210ENST00000503827 A0A1W2PPC1 479 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 ECM2O94769 699 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 GJB1P08034 283 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 GRK4P32298 578 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 SNAPC2Q13487 334 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 ERO1BQ86YB8 467 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 RAET1EQ8TD07 263 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 MYH16Q9H6N6 1097 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 SRRDQ9UH36 339 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 FAM205AQ6ZU69 1335 aa20.21■□□□□ 0.83
PDLIM7-210ENST00000503827 PSMC4P43686 418 aa20.2■□□□□ 0.82
PDLIM7-210ENST00000503827 CASP7P55210 303 aa20.2■□□□□ 0.82
PDLIM7-210ENST00000503827 IFIT5Q13325 482 aaKnown RBP20.2■□□□□ 0.82
PDLIM7-210ENST00000503827 MFSD14BQ5SR56 506 aa20.2■□□□□ 0.82
PDLIM7-210ENST00000503827 UBE2Q1Q7Z7E8 422 aa20.2■□□□□ 0.82
PDLIM7-210ENST00000503827 ZBTB7BO15156 539 aaPredicted RBP20.19■□□□□ 0.82
PDLIM7-210ENST00000503827 CCL5P13501 91 aa20.19■□□□□ 0.82
PDLIM7-210ENST00000503827 C17orf99Q6UX52 265 aa20.19■□□□□ 0.82
PDLIM7-210ENST00000503827 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
PDLIM7-210ENST00000503827 TRIM47Q96LD4 638 aa20.19■□□□□ 0.82
PDLIM7-210ENST00000503827 RNF208Q9H0X6 261 aa20.19■□□□□ 0.82
PDLIM7-210ENST00000503827 RIPOR2Q9Y4F9 1068 aa20.19■□□□□ 0.82
PDLIM7-210ENST00000503827 SNCAIPQ9Y6H5 919 aa20.19■□□□□ 0.82
PDLIM7-210ENST00000503827 IRF6O14896 467 aa20.18■□□□□ 0.82
PDLIM7-210ENST00000503827 FMNL1O95466 1100 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-210ENST00000503827 UBXN2AP68543 259 aa20.18■□□□□ 0.82
PDLIM7-210ENST00000503827 BIN2Q9UBW5 565 aaPredicted RBP20.18■□□□□ 0.82
PDLIM7-210ENST00000503827 CHMP3Q9Y3E7 222 aa20.18■□□□□ 0.82
PDLIM7-210ENST00000503827 PLIN1O60240 522 aa20.17■□□□□ 0.82
PDLIM7-210ENST00000503827 OSBPP22059 807 aa20.17■□□□□ 0.82
PDLIM7-210ENST00000503827 CRKP46108 304 aa20.17■□□□□ 0.82
PDLIM7-210ENST00000503827 MNX1P50219 401 aaPredicted RBP20.17■□□□□ 0.82
PDLIM7-210ENST00000503827 PPIL2Q13356 520 aa20.17■□□□□ 0.82
PDLIM7-210ENST00000503827 WRNIP1Q96S55 665 aa20.17■□□□□ 0.82
PDLIM7-210ENST00000503827 CPA4Q9UI42 421 aa20.17■□□□□ 0.82
PDLIM7-210ENST00000503827 MGAMO43451 1857 aa20.17■□□□□ 0.82
PDLIM7-210ENST00000503827 RANBP2P49792 3224 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 APAF1O14727 1248 aa20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 FARP2O94887 1054 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 CTGFP29279 349 aa20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 G2E3Q7L622 706 aa20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 TDRD7Q8NHU6 1098 aaKnown RBP20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 ZKSCAN4Q969J2 545 aaPredicted RBP20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 HOOK2Q96ED9 719 aa20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 MYPNQ86TC9 1320 aa20.16■□□□□ 0.82
PDLIM7-210ENST00000503827 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
PDLIM7-210ENST00000503827 LINS1Q8NG48 757 aa20.15■□□□□ 0.82
PDLIM7-210ENST00000503827 CACNA1FO60840 1977 aa20.15■□□□□ 0.82
PDLIM7-210ENST00000503827 SOX1O00570 391 aaPredicted RBP20.14■□□□□ 0.81
PDLIM7-210ENST00000503827 EVI5O60447 810 aa20.14■□□□□ 0.81
PDLIM7-210ENST00000503827 TAF7LQ5H9L4 462 aa20.14■□□□□ 0.81
PDLIM7-210ENST00000503827 LDHAL6AQ6ZMR3 332 aa20.14■□□□□ 0.81
PDLIM7-210ENST00000503827 U2AF1L4Q8WU68 220 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-210ENST00000503827 LRCH3Q96II8 777 aa20.14■□□□□ 0.81
PDLIM7-210ENST00000503827 HIBADHP31937 336 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-210ENST00000503827 FOXO4P98177 505 aa20.13■□□□□ 0.81
PDLIM7-210ENST00000503827 PPATQ06203 517 aa20.13■□□□□ 0.81
PDLIM7-210ENST00000503827 ANKRD23Q86SG2 305 aa20.13■□□□□ 0.81
PDLIM7-210ENST00000503827 DNAAF4Q8WXU2 420 aa20.13■□□□□ 0.81
PDLIM7-210ENST00000503827 CNNM1Q9NRU3 951 aa20.13■□□□□ 0.81
PDLIM7-210ENST00000503827 PDHXO00330 501 aa20.12■□□□□ 0.81
PDLIM7-210ENST00000503827 GYG1P46976 350 aa20.12■□□□□ 0.81
PDLIM7-210ENST00000503827 FKBP5Q13451 457 aaPredicted RBP20.12■□□□□ 0.81
PDLIM7-210ENST00000503827 CCDC57Q2TAC2 916 aa20.12■□□□□ 0.81
PDLIM7-210ENST00000503827 DCAF15Q66K64 600 aa20.12■□□□□ 0.81
PDLIM7-210ENST00000503827 SLAIN1Q8ND83 568 aa20.12■□□□□ 0.81
PDLIM7-210ENST00000503827 TMOD2Q9NZR1 351 aa20.12■□□□□ 0.81
PDLIM7-210ENST00000503827 SGPL1O95470 568 aa20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 CAPN2P17655 700 aa20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 CACNB3P54284 484 aa20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 HDLBPQ00341 1268 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 FLIIQ13045 1269 aa20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 UBE4AQ14139 1066 aa20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 FAM83AQ86UY5 434 aa20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 STAP2Q9UGK3 403 aa20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 COL6A3P12111 3177 aa20.11■□□□□ 0.81
PDLIM7-210ENST00000503827 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 ADGRA2Q96PE1 1338 aa20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 FCGRTP55899 365 aa20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 PRKCZQ05513 592 aa20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 TWISTNBQ3B726 338 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 LMBR1LQ6UX01 489 aa20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 TEKT1Q969V4 418 aa20.1■□□□□ 0.81
PDLIM7-210ENST00000503827 ZNF594Q96JF6 807 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms