RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 LINS1Q8NG48 757 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 DNAAF4Q8WXU2 420 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 OTUD5Q96G74 571 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 CHMP3Q9Y3E7 222 aa20.08■□□□□ 0.81
DDR1-250ENST00000503628 VGLL4Q14135 290 aa20.07■□□□□ 0.8
DDR1-250ENST00000503628 SH3TC2Q8TF17 1288 aa20.07■□□□□ 0.8
DDR1-250ENST00000503628 TTF2Q9UNY4 1162 aaKnown RBP20.07■□□□□ 0.8
DDR1-250ENST00000503628 ZSWIM8A7E2V4 1837 aa20.06■□□□□ 0.8
DDR1-250ENST00000503628 FAM205AQ6ZU69 1335 aa20.06■□□□□ 0.8
DDR1-250ENST00000503628 TCP10L2B9ZVM9 353 aa20.06■□□□□ 0.8
DDR1-250ENST00000503628 FKBP5Q13451 457 aaPredicted RBP20.06■□□□□ 0.8
DDR1-250ENST00000503628 ARHGAP39Q9C0H5 1083 aa20.06■□□□□ 0.8
DDR1-250ENST00000503628 TMEM39BQ9GZU3 492 aa20.06■□□□□ 0.8
DDR1-250ENST00000503628 SERPINA10Q9UK55 444 aa20.06■□□□□ 0.8
DDR1-250ENST00000503628 SZT2Q5T011 3432 aa20.06■□□□□ 0.8
DDR1-250ENST00000503628 MFSD14BQ5SR56 506 aa20.05■□□□□ 0.8
DDR1-250ENST00000503628 DZIP1LQ8IYY4 767 aaKnown RBP20.05■□□□□ 0.8
DDR1-250ENST00000503628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.05■□□□□ 0.8
DDR1-250ENST00000503628 ZNF594Q96JF6 807 aaPredicted RBP20.05■□□□□ 0.8
DDR1-250ENST00000503628 CSADQ9Y600 493 aa20.05■□□□□ 0.8
DDR1-250ENST00000503628 LDHAL6AQ6ZMR3 332 aa20.04■□□□□ 0.8
DDR1-250ENST00000503628 TDRD7Q8NHU6 1098 aaKnown RBP20.04■□□□□ 0.8
DDR1-250ENST00000503628 TLR2O60603 784 aa20.03■□□□□ 0.8
DDR1-250ENST00000503628 KIF22Q14807 665 aa20.03■□□□□ 0.8
DDR1-250ENST00000503628 LMBR1LQ6UX01 489 aa20.03■□□□□ 0.8
DDR1-250ENST00000503628 ARAP2Q8WZ64 1704 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 WDHD1O75717 1129 aaPredicted RBP20.02■□□□□ 0.8
DDR1-250ENST00000503628 CRKP46108 304 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 GYG1P46976 350 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 TNNI2P48788 182 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 LACTBP83111 547 aaPredicted RBP20.02■□□□□ 0.8
DDR1-250ENST00000503628 CCDC57Q2TAC2 916 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 TAF7LQ5H9L4 462 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 EPHA10Q5JZY3 1008 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 CHRDL2Q6WN34 429 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 CNNM1Q9NRU3 951 aa20.02■□□□□ 0.8
DDR1-250ENST00000503628 CACNA1FO60840 1977 aa20.01■□□□□ 0.79
DDR1-250ENST00000503628 SPDYE5A6NIY4 337 aa20.01■□□□□ 0.79
DDR1-250ENST00000503628 BTBD19C9JJ37 291 aa20.01■□□□□ 0.79
DDR1-250ENST00000503628 ECM2O94769 699 aaPredicted RBP20.01■□□□□ 0.79
DDR1-250ENST00000503628 CETPP11597 493 aa20.01■□□□□ 0.79
DDR1-250ENST00000503628 HIBADHP31937 336 aaKnown RBP20.01■□□□□ 0.79
DDR1-250ENST00000503628 CCDC27Q2M243 656 aa20.01■□□□□ 0.79
DDR1-250ENST00000503628 NCBP3Q53F19 620 aaKnown RBP20.01■□□□□ 0.79
DDR1-250ENST00000503628 MTFR1Q15390 333 aa20■□□□□ 0.79
DDR1-250ENST00000503628 GRIK5Q16478 980 aa20■□□□□ 0.79
DDR1-250ENST00000503628 DPF3Q92784 378 aa20■□□□□ 0.79
DDR1-250ENST00000503628 FAM84BQ96KN1 310 aaPredicted RBP20■□□□□ 0.79
DDR1-250ENST00000503628 SNCAIPQ9Y6H5 919 aa20■□□□□ 0.79
DDR1-250ENST00000503628 GNRH1P01148 92 aa19.99■□□□□ 0.79
DDR1-250ENST00000503628 CACNB3P54284 484 aa19.99■□□□□ 0.79
DDR1-250ENST00000503628 UBE4AQ14139 1066 aa19.99■□□□□ 0.79
DDR1-250ENST00000503628 ERO1BQ86YB8 467 aa19.99■□□□□ 0.79
DDR1-250ENST00000503628 ZKSCAN4Q969J2 545 aaPredicted RBP19.99■□□□□ 0.79
DDR1-250ENST00000503628 SHISA4Q96DD7 197 aa19.99■□□□□ 0.79
DDR1-250ENST00000503628 ZCCHC17Q9NP64 241 aaKnown RBP19.99■□□□□ 0.79
DDR1-250ENST00000503628 RBM27Q9P2N5 1060 aaKnown RBP19.99■□□□□ 0.79
DDR1-250ENST00000503628 F6X3S4 739 aa19.98■□□□□ 0.79
DDR1-250ENST00000503628 IRF6O14896 467 aa19.98■□□□□ 0.79
DDR1-250ENST00000503628 PRMT2P55345 433 aa19.98■□□□□ 0.79
DDR1-250ENST00000503628 BEND3Q5T5X7 828 aa19.98■□□□□ 0.79
DDR1-250ENST00000503628 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
DDR1-250ENST00000503628 RANBP2P49792 3224 aaKnown RBP19.98■□□□□ 0.79
DDR1-250ENST00000503628 SNAPC2Q13487 334 aa19.97■□□□□ 0.79
DDR1-250ENST00000503628 WRNIP1Q96S55 665 aa19.97■□□□□ 0.79
DDR1-250ENST00000503628 CTGFP29279 349 aa19.96■□□□□ 0.79
DDR1-250ENST00000503628 C17orf99Q6UX52 265 aa19.96■□□□□ 0.79
DDR1-250ENST00000503628 PUS3Q9BZE2 481 aaKnown RBP19.96■□□□□ 0.79
DDR1-250ENST00000503628 IQSEC3Q9UPP2 1182 aaPredicted RBP19.96■□□□□ 0.79
DDR1-250ENST00000503628 VAMP4O75379 141 aa19.95■□□□□ 0.78
DDR1-250ENST00000503628 PSMC4P43686 418 aa19.95■□□□□ 0.78
DDR1-250ENST00000503628 PPIL2Q13356 520 aa19.95■□□□□ 0.78
DDR1-250ENST00000503628 SRRDQ9UH36 339 aa19.95■□□□□ 0.78
DDR1-250ENST00000503628 CPA4Q9UI42 421 aa19.95■□□□□ 0.78
DDR1-250ENST00000503628 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
DDR1-250ENST00000503628 GRM8O00222 908 aa19.94■□□□□ 0.78
DDR1-250ENST00000503628 HDLBPQ00341 1268 aaKnown RBP19.94■□□□□ 0.78
DDR1-250ENST00000503628 CHAF1AQ13111 956 aaPredicted RBP19.94■□□□□ 0.78
DDR1-250ENST00000503628 TRIM47Q96LD4 638 aa19.94■□□□□ 0.78
DDR1-250ENST00000503628 OSBPP22059 807 aa19.93■□□□□ 0.78
DDR1-250ENST00000503628 GRK4P32298 578 aa19.93■□□□□ 0.78
DDR1-250ENST00000503628 FBXO33Q7Z6M2 555 aa19.93■□□□□ 0.78
DDR1-250ENST00000503628 NKX2-3Q8TAU0 364 aa19.93■□□□□ 0.78
DDR1-250ENST00000503628 RAET1EQ8TD07 263 aa19.93■□□□□ 0.78
DDR1-250ENST00000503628 TEKT1Q969V4 418 aa19.93■□□□□ 0.78
DDR1-250ENST00000503628 IL16Q14005 1332 aa19.93■□□□□ 0.78
DDR1-250ENST00000503628 FMNL1O95466 1100 aaPredicted RBP19.92■□□□□ 0.78
DDR1-250ENST00000503628 HOXD10P28358 340 aa19.92■□□□□ 0.78
DDR1-250ENST00000503628 GJA8P48165 433 aa19.92■□□□□ 0.78
DDR1-250ENST00000503628 UBE2Q1Q7Z7E8 422 aa19.92■□□□□ 0.78
DDR1-250ENST00000503628 FAM83AQ86UY5 434 aa19.92■□□□□ 0.78
DDR1-250ENST00000503628 VPS37DQ86XT2 251 aa19.92■□□□□ 0.78
DDR1-250ENST00000503628 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
DDR1-250ENST00000503628 C9orf78Q9NZ63 289 aaPredicted RBP19.92■□□□□ 0.78
DDR1-250ENST00000503628 TMOD2Q9NZR1 351 aa19.92■□□□□ 0.78
DDR1-250ENST00000503628 RIPOR2Q9Y4F9 1068 aa19.92■□□□□ 0.78
DDR1-250ENST00000503628 PDHXO00330 501 aa19.91■□□□□ 0.78
DDR1-250ENST00000503628 FRAT2O75474 233 aaPredicted RBP19.91■□□□□ 0.78
DDR1-250ENST00000503628 GJB1P08034 283 aa19.91■□□□□ 0.78
DDR1-250ENST00000503628 CCL5P13501 91 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms