RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 PRKAG2Q9UGJ0 569 aa12.74□□□□□ -0.37
EXOSC9-203ENST00000503139 GREM1O60565 184 aa12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 LILRB5O75023 590 aa12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 BCRP11274 1271 aa12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 FAM160A1Q05DH4 1040 aa12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 HGSNATQ68CP4 663 aa12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 SULF2Q8IWU5 870 aa12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 EAF1Q96JC9 268 aaPredicted RBP12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
EXOSC9-203ENST00000503139 ARID5AQ03989 594 aa12.72□□□□□ -0.37
EXOSC9-203ENST00000503139 ILDR2Q71H61 639 aa12.72□□□□□ -0.37
EXOSC9-203ENST00000503139 SAMM50Q9Y512 469 aa12.72□□□□□ -0.37
EXOSC9-203ENST00000503139 DNAJA1P31689 397 aaKnown RBP12.71□□□□□ -0.37
EXOSC9-203ENST00000503139 GMPRP36959 345 aa12.71□□□□□ -0.37
EXOSC9-203ENST00000503139 TRIM42Q8IWZ5 723 aa12.71□□□□□ -0.37
EXOSC9-203ENST00000503139 UBXN4Q92575 508 aa12.71□□□□□ -0.37
EXOSC9-203ENST00000503139 NT5C1AQ9BXI3 368 aa12.71□□□□□ -0.37
EXOSC9-203ENST00000503139 SUPT16HQ9Y5B9 1047 aaKnown RBP12.71□□□□□ -0.37
EXOSC9-203ENST00000503139 ATF4P18848 351 aaPredicted RBP12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 ARNTP27540 789 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 CDC25BP30305 580 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 PIP4K2BP78356 416 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 COL9A3Q14050 684 aaPredicted RBP12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 TXNDC11Q6PKC3 985 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 LYPD4Q6UWN0 246 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 PDZD3Q86UT5 571 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 WNT8BQ93098 351 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 CYP8B1Q9UNU6 501 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 PCDHB5Q9Y5E4 795 aa12.7□□□□□ -0.38
EXOSC9-203ENST00000503139 LINC01387J3KSC0 135 aa12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 TM4SF5O14894 197 aa12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 CELA2BP08218 269 aaPredicted RBP12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 FGRP09769 529 aa12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 ZNF252P-AS1Q0IIN9 211 aa12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 SNAP47Q5SQN1 464 aa12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 MSL1Q68DK7 614 aa12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 GOLM1Q8NBJ4 401 aa12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 NRSN2Q9GZP1 204 aa12.69□□□□□ -0.38
EXOSC9-203ENST00000503139 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
EXOSC9-203ENST00000503139 CCDC84Q86UT8 332 aaPredicted RBP12.68□□□□□ -0.38
EXOSC9-203ENST00000503139 WFDC8Q8IUA0 241 aa12.68□□□□□ -0.38
EXOSC9-203ENST00000503139 GRIN3AQ8TCU5 1115 aa12.68□□□□□ -0.38
EXOSC9-203ENST00000503139 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
EXOSC9-203ENST00000503139 NID1P14543 1247 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 C19orf57Q0VDD7 668 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 LLGL2Q6P1M3 1020 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 FAM196AQ6ZSG2 479 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 VPS37DQ86XT2 251 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 MCF2L2Q86YR7 1114 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 SLC7A3Q8WY07 619 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 GAL3ST3Q96A11 431 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 SPATA32Q96LK8 384 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 UBP1Q9NZI7 540 aa12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 PPP1R1BQ9UD71 204 aaPredicted RBP12.67□□□□□ -0.38
EXOSC9-203ENST00000503139 FSCN2O14926 492 aa12.66□□□□□ -0.38
EXOSC9-203ENST00000503139 HOXB4P17483 251 aaPredicted RBP12.66□□□□□ -0.38
EXOSC9-203ENST00000503139 CRKP46108 304 aa12.66□□□□□ -0.38
EXOSC9-203ENST00000503139 LRRC14Q15048 493 aa12.66□□□□□ -0.38
EXOSC9-203ENST00000503139 BNC2Q6ZN30 1099 aaPredicted RBP12.66□□□□□ -0.38
EXOSC9-203ENST00000503139 WHAMMQ8TF30 809 aa12.66□□□□□ -0.38
EXOSC9-203ENST00000503139 OSGEPQ9NPF4 335 aa12.66□□□□□ -0.38
EXOSC9-203ENST00000503139 FAM221AA4D161 298 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 WFS1O76024 890 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 F13A1P00488 732 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 GSTM4Q03013 218 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 SCARA3Q6AZY7 606 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 FAM117BQ6P1L5 589 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 SEC16BQ96JE7 1060 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 MIR1-1HGQ9H1L0 117 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 CACNA2D2Q9NY47 1150 aa12.65□□□□□ -0.38
EXOSC9-203ENST00000503139 GSTP1P09211 210 aaKnown RBP12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 DGKGP49619 791 aa12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 SEPT6Q14141 434 aa12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 SETDB1Q15047 1291 aa12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 GATAD2BQ8WXI9 593 aa12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 ARMC5Q96C12 935 aa12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 LRRC3Q9BY71 257 aa12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 CBX8Q9HC52 389 aa12.64□□□□□ -0.39
EXOSC9-203ENST00000503139 EIF4EBP3O60516 100 aaPredicted RBP12.63□□□□□ -0.39
EXOSC9-203ENST00000503139 AMPD1P23109 780 aa12.63□□□□□ -0.39
EXOSC9-203ENST00000503139 ARL4DP49703 201 aa12.63□□□□□ -0.39
EXOSC9-203ENST00000503139 CARD10Q9BWT7 1032 aa12.63□□□□□ -0.39
EXOSC9-203ENST00000503139 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
EXOSC9-203ENST00000503139 ROBO2Q9HCK4 1378 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 LMNB1P20700 586 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 SOX9P48436 509 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 SLITRK4Q8IW52 837 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 FBXO27Q8NI29 283 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 DHX38Q92620 1227 aaKnown RBP12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 KLHDC7BQ96G42 594 aa12.62□□□□□ -0.39
EXOSC9-203ENST00000503139 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■□□□□ 8.2
EXOSC9-203ENST00000503139 CILPO75339 1184 aa12.61□□□□□ -0.39
EXOSC9-203ENST00000503139 TRIM37O94972 964 aa12.61□□□□□ -0.39
EXOSC9-203ENST00000503139 ECEL1O95672 775 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms