RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TMC4Q7Z404 712 aa26.07■■□□□ 1.76
PTPN13-205ENST00000502971 FBXL16Q8N461 479 aa26.07■■□□□ 1.76
PTPN13-205ENST00000502971 BRIP1Q9BX63 1249 aa26.07■■□□□ 1.76
PTPN13-205ENST00000502971 AGXT2Q9BYV1 514 aa26.07■■□□□ 1.76
PTPN13-205ENST00000502971 PARP3Q9Y6F1 533 aa26.07■■□□□ 1.76
PTPN13-205ENST00000502971 ST3GAL1Q11201 340 aa26.06■■□□□ 1.76
PTPN13-205ENST00000502971 TMED8Q6PL24 325 aaPredicted RBP26.06■■□□□ 1.76
PTPN13-205ENST00000502971 IGSF3O75054 1194 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 MMP10P09238 476 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 CYP7A1P22680 504 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 HAND2P61296 217 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 FGD1P98174 961 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 WDR33Q9C0J8 1336 aaKnown RBP26.05■■□□□ 1.76
PTPN13-205ENST00000502971 ATP2B4P23634 1241 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 NECAB1Q8N987 351 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 NCOA7Q8NI08 942 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 ARMT1Q9H993 441 aa26.05■■□□□ 1.76
PTPN13-205ENST00000502971 MYH13Q9UKX3 1938 aa26.04■■□□□ 1.76
PTPN13-205ENST00000502971 PDIA4P13667 645 aaKnown RBP26.04■■□□□ 1.76
PTPN13-205ENST00000502971 IFNL3Q8IZI9 196 aa26.04■■□□□ 1.76
PTPN13-205ENST00000502971 GPSM2P81274 684 aa26.03■■□□□ 1.76
PTPN13-205ENST00000502971 TXNRD3Q86VQ6 643 aa26.03■■□□□ 1.76
PTPN13-205ENST00000502971 BRF1Q92994 677 aa26.03■■□□□ 1.76
PTPN13-205ENST00000502971 NACAP1Q9BZK3 213 aa26.03■■□□□ 1.76
PTPN13-205ENST00000502971 WDR19Q8NEZ3 1342 aa26.03■■□□□ 1.76
PTPN13-205ENST00000502971 GJB2P29033 226 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 LCORLQ8N3X6 602 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 ANKRD31Q8N7Z5 1873 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 GSG1L2A8MUP6 293 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 MCM5P33992 734 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 MSL1Q68DK7 614 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 ZNF804AQ7Z570 1209 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 RALYLQ86SE5 291 aaKnown RBP26.02■■□□□ 1.76
PTPN13-205ENST00000502971 MB21D2Q8IYB1 491 aaPredicted RBP26.02■■□□□ 1.76
PTPN13-205ENST00000502971 NAPBQ9H115 298 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 PODXL2Q9NZ53 605 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 CACNA1SQ13698 1873 aa26.02■■□□□ 1.76
PTPN13-205ENST00000502971 MAGEB6P1A0A0J9YX57 407 aa26.01■■□□□ 1.75
PTPN13-205ENST00000502971 TRAK2O60296 914 aa26.01■■□□□ 1.75
PTPN13-205ENST00000502971 NAA16Q6N069 864 aaPredicted RBP26.01■■□□□ 1.75
PTPN13-205ENST00000502971 GTF3C6Q969F1 213 aa26.01■■□□□ 1.75
PTPN13-205ENST00000502971 LRRC2Q9BYS8 371 aa26.01■■□□□ 1.75
PTPN13-205ENST00000502971 GGA1Q9UJY5 639 aa26.01■■□□□ 1.75
PTPN13-205ENST00000502971 SLC4A4Q9Y6R1 1079 aa26.01■■□□□ 1.75
PTPN13-205ENST00000502971 TRDNQ13061 729 aa26■■□□□ 1.75
PTPN13-205ENST00000502971 PDGFDQ9GZP0 370 aaPredicted RBP26■■□□□ 1.75
PTPN13-205ENST00000502971 EPB41L4AQ9HCS5 686 aaPredicted RBP26■■□□□ 1.75
PTPN13-205ENST00000502971 NSFL1CQ9UNZ2 370 aaKnown RBP26■■□□□ 1.75
PTPN13-205ENST00000502971 SALL1Q9NSC2 1324 aa26■■□□□ 1.75
PTPN13-205ENST00000502971 SYT1P21579 422 aa26■■□□□ 1.75
PTPN13-205ENST00000502971 PDE6BP35913 854 aa26■■□□□ 1.75
PTPN13-205ENST00000502971 SKOR2Q2VWA4 1001 aaPredicted RBP26■■□□□ 1.75
PTPN13-205ENST00000502971 SPTY2D1Q68D10 685 aaPredicted RBP26■■□□□ 1.75
PTPN13-205ENST00000502971 TDRD7Q8NHU6 1098 aaKnown RBP26■■□□□ 1.75
PTPN13-205ENST00000502971 CHMP4CQ96CF2 233 aa26■■□□□ 1.75
PTPN13-205ENST00000502971 NBPF3Q9H094 633 aa26■■□□□ 1.75
PTPN13-205ENST00000502971 STX6O43752 255 aa25.99■■□□□ 1.75
PTPN13-205ENST00000502971 PFKFB2O60825 505 aa25.99■■□□□ 1.75
PTPN13-205ENST00000502971 NPR1P16066 1061 aa25.99■■□□□ 1.75
PTPN13-205ENST00000502971 ADGRA1Q86SQ6 560 aa25.99■■□□□ 1.75
PTPN13-205ENST00000502971 SP8Q8IXZ3 490 aa25.99■■□□□ 1.75
PTPN13-205ENST00000502971 MIGA1Q8NAN2 632 aa25.99■■□□□ 1.75
PTPN13-205ENST00000502971 NSUN4Q96CB9 384 aaKnown RBP25.99■■□□□ 1.75
PTPN13-205ENST00000502971 UFL1O94874 794 aa25.98■■□□□ 1.75
PTPN13-205ENST00000502971 CHAF1AQ13111 956 aaPredicted RBP25.98■■□□□ 1.75
PTPN13-205ENST00000502971 STK3Q13188 491 aa25.98■■□□□ 1.75
PTPN13-205ENST00000502971 GSE1Q14687 1217 aa25.98■■□□□ 1.75
PTPN13-205ENST00000502971 TBC1D10CQ8IV04 446 aa25.98■■□□□ 1.75
PTPN13-205ENST00000502971 WDR66Q8TBY9 1149 aa25.98■■□□□ 1.75
PTPN13-205ENST00000502971 ZNF274Q96GC6 653 aaPredicted RBP25.98■■□□□ 1.75
PTPN13-205ENST00000502971 LRRC37AA6NMS7 1700 aa25.98■■□□□ 1.75
PTPN13-205ENST00000502971 PPEF1O14829 653 aaPredicted RBP25.97■■□□□ 1.75
PTPN13-205ENST00000502971 PRC1O43663 620 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 SRGNP10124 158 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 EVCP57679 992 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 R3HDM1Q15032 1099 aaKnown RBP25.97■■□□□ 1.75
PTPN13-205ENST00000502971 MCTP1Q6DN14 999 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 RIOK1Q9BRS2 568 aaKnown RBP25.97■■□□□ 1.75
PTPN13-205ENST00000502971 PRKAB2O43741 272 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 ZSCAN22P10073 491 aaPredicted RBP25.97■■□□□ 1.75
PTPN13-205ENST00000502971 PDCP20941 246 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 TDO2P48775 406 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 APOBRQ0VD83 1088 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 SLC51AQ86UW1 340 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 LLPHQ9BRT6 129 aaKnown RBP25.97■■□□□ 1.75
PTPN13-205ENST00000502971 MTFR1LQ9H019 292 aa25.97■■□□□ 1.75
PTPN13-205ENST00000502971 MAST2Q6P0Q8 1798 aa25.96■■□□□ 1.75
PTPN13-205ENST00000502971 MECOMQ03112 1051 aa25.96■■□□□ 1.75
PTPN13-205ENST00000502971 FOXD4L5Q5VV16 416 aaPredicted RBP25.96■■□□□ 1.75
PTPN13-205ENST00000502971 CHST3Q7LGC8 479 aa25.96■■□□□ 1.75
PTPN13-205ENST00000502971 ZNF384Q8TF68 577 aa25.96■■□□□ 1.75
PTPN13-205ENST00000502971 FOXD4L4Q8WXT5 416 aaPredicted RBP25.96■■□□□ 1.75
PTPN13-205ENST00000502971 ALDH1B1P30837 517 aa25.95■■□□□ 1.74
PTPN13-205ENST00000502971 ATP6V0A2Q9Y487 856 aa25.95■■□□□ 1.74
PTPN13-205ENST00000502971 TIAM2Q8IVF5 1701 aa25.94■■□□□ 1.74
PTPN13-205ENST00000502971 ANTXR2P58335 489 aa25.94■■□□□ 1.74
PTPN13-205ENST00000502971 SCRN1Q12765 414 aa25.94■■□□□ 1.74
PTPN13-205ENST00000502971 TBC1D16Q8TBP0 767 aa25.94■■□□□ 1.74
PTPN13-205ENST00000502971 CNNM2Q9H8M5 875 aa25.94■■□□□ 1.74
PTPN13-205ENST00000502971 IL1R1P14778 569 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms