RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 CNTRLQ7Z7A1 2325 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 AMOTL1Q8IY63 956 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 MYBBP1AQ9BQG0 1328 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 CCDC102BQ68D86 513 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 DIABLOQ9NR28 239 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 MRGBPQ9NV56 204 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ADAMTS8Q9UP79 889 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 KIF11P52732 1056 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 PHEXP78562 749 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 PARP9Q8IXQ6 854 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 OPTNQ96CV9 577 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 SMAPO00193 183 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 SF3B2Q13435 895 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 CYLC2Q14093 348 aaPredicted RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ZSCAN31Q96LW9 406 aaPredicted RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ANKRD65E5RJM6 399 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ST13P5Q8NFI4 369 aaPredicted RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 PPP1R14CQ8TAE6 165 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 SNRNP27Q8WVK2 155 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 TMEM165Q9HC07 324 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 PCDHB15Q9Y5E8 787 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 EFCAB8A8MWE9 144 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 IFI16Q16666 785 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 TRIM60Q495X7 471 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ARHGAP10A1A4S6 786 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 TARSL2A2RTX5 802 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 ST13P4Q8IZP2 240 aaPredicted RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 VIL1P09327 827 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 DHX9Q08211 1270 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 SRLQ86TD4 932 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 MIEF2Q96C03 454 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 NOP9Q86U38 636 aaKnown RBP5.36□□□□□ -1.55
NEAT1-202ENST00000501122 CHCHD4Q8N4Q1 142 aa5.36□□□□□ -1.55
NEAT1-202ENST00000501122 MSL3P1P0C860 447 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 NME8Q8N427 588 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 THOC1Q96FV9 657 aaKnown RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 TSNARE1Q96NA8 513 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 WDR70Q9NW82 654 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 MAP3K21Q5TCX8 1036 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.35□□□□□ -1.556e-7■□□□□ 10.6
NEAT1-202ENST00000501122 GOLGA8IPA6NC78 632 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 SF3A3Q12874 501 aaKnown RBP eCLIP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 VPS53Q5VIR6 699 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 SELENOOQ9BVL4 669 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 DDX21Q9NR30 783 aaKnown RBP eCLIP5.35□□□□□ -1.551e-323■□□□□ 8.5
NEAT1-202ENST00000501122 TLDC2A0PJX2 215 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 LRRIQ3A6PVS8 624 aaPredicted RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 GNAT2P19087 354 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 IFT20Q8IY31 132 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 ENOX1Q8TC92 643 aaKnown RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 MTRQ99707 1265 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 IQSEC3Q9UPP2 1182 aaPredicted RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 ERCC5P28715 1186 aaPredicted RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 STAMBPL1Q96FJ0 436 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 TMOD4Q9NZQ9 345 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 EID1Q9Y6B2 187 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 USP19O94966 1318 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 RHOBTB1O94844 696 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 SPDYE1Q8NFV5 336 aaPredicted RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 MAP3K7O43318 606 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 PAPOLAP51003 745 aaKnown RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 CETN1Q12798 172 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 NUP88Q99567 741 aaPredicted RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 PPP6R1Q9UPN7 881 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 AKNAQ7Z591 1439 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 ESRRBO95718 433 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 FOSL1P15407 271 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 FAM200BP0CF97 657 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 PRKG1Q13976 671 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 ZNF569Q5MCW4 686 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 RIOK1Q9BRS2 568 aaKnown RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 PPP4R4Q6NUP7 873 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 ITM2BQ9Y287 266 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 HOMER2Q9NSB8 354 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 SMCR8Q8TEV9 937 aaPredicted RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.35□□□□□ -1.55
NEAT1-202ENST00000501122 MYO1EQ12965 1108 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 ABCF2Q9UG63 623 aa5.35□□□□□ -1.55
NEAT1-202ENST00000501122 P4HA2O15460 535 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TYRO3Q06418 890 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 CWC27Q6UX04 472 aaKnown RBP5.34□□□□□ -1.55
NEAT1-202ENST00000501122 PPANQ9NQ55 473 aaKnown RBP5.34□□□□□ -1.55
NEAT1-202ENST00000501122 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.34□□□□□ -1.55
NEAT1-202ENST00000501122 NDC80O14777 642 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 SPATA21Q7Z572 469 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 CCDC197Q8NCU1 140 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TMEM110Q86TL2 294 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 CATSPER2Q96P56 530 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 RSF1Q96T23 1441 aaPredicted RBP5.34□□□□□ -1.55
NEAT1-202ENST00000501122 GOLGA8KD6RF30 607 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TSHZ1Q6ZSZ6 1077 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 SMC5Q8IY18 1101 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 CAPZA3Q96KX2 299 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 BCAP29Q9UHQ4 241 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 SLC4A7Q9Y6M7 1214 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 ARPC4P59998 168 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 RAB3GAP2Q9H2M9 1393 aa5.34□□□□□ -1.55
NEAT1-202ENST00000501122 TRIM63Q969Q1 353 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms