RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TNNI2P48788 182 aa14.86□□□□□ -0.03
CDK9-205ENST00000498339 MFSD14BQ5SR56 506 aa14.86□□□□□ -0.03
CDK9-205ENST00000498339 C15orf52Q6ZUT6 534 aaKnown RBP14.86□□□□□ -0.03
CDK9-205ENST00000498339 ARHGAP39Q9C0H5 1083 aa14.86□□□□□ -0.03
CDK9-205ENST00000498339 TMEM39BQ9GZU3 492 aa14.86□□□□□ -0.03
CDK9-205ENST00000498339 MAP3K9P80192 1104 aa14.85□□□□□ -0.03
CDK9-205ENST00000498339 TWISTNBQ3B726 338 aaPredicted RBP14.85□□□□□ -0.03
CDK9-205ENST00000498339 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.85□□□□□ -0.03
CDK9-205ENST00000498339 CDAN1Q8IWY9 1227 aa14.85□□□□□ -0.03
CDK9-205ENST00000498339 DNAAF4Q8WXU2 420 aa14.85□□□□□ -0.03
CDK9-205ENST00000498339 CNNM1Q9NRU3 951 aa14.85□□□□□ -0.03
CDK9-205ENST00000498339 CASP7P55210 303 aa14.84□□□□□ -0.03
CDK9-205ENST00000498339 FLIIQ13045 1269 aa14.84□□□□□ -0.03
CDK9-205ENST00000498339 LINS1Q8NG48 757 aa14.84□□□□□ -0.03
CDK9-205ENST00000498339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDK9-205ENST00000498339 SERPINA10Q9UK55 444 aa14.84□□□□□ -0.03
CDK9-205ENST00000498339 MYH13Q9UKX3 1938 aa14.84□□□□□ -0.03
CDK9-205ENST00000498339 MGAMO43451 1857 aa14.83□□□□□ -0.04
CDK9-205ENST00000498339 TLR2O60603 784 aa14.83□□□□□ -0.04
CDK9-205ENST00000498339 CETPP11597 493 aa14.83□□□□□ -0.04
CDK9-205ENST00000498339 LACTBP83111 547 aaPredicted RBP14.83□□□□□ -0.04
CDK9-205ENST00000498339 CCDC57Q2TAC2 916 aa14.83□□□□□ -0.04
CDK9-205ENST00000498339 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
CDK9-205ENST00000498339 CRKP46108 304 aa14.82□□□□□ -0.04
CDK9-205ENST00000498339 LDHAL6AQ6ZMR3 332 aa14.82□□□□□ -0.04
CDK9-205ENST00000498339 ZNF594Q96JF6 807 aaPredicted RBP14.82□□□□□ -0.04
CDK9-205ENST00000498339 TEPSINQ96N21 525 aa14.82□□□□□ -0.04
CDK9-205ENST00000498339 WRNIP1Q96S55 665 aa14.82□□□□□ -0.04
CDK9-205ENST00000498339 RBM27Q9P2N5 1060 aaKnown RBP14.82□□□□□ -0.04
CDK9-205ENST00000498339 FAM205AQ6ZU69 1335 aa14.82□□□□□ -0.04
CDK9-205ENST00000498339 SPDYE5A6NIY4 337 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 BTBD19C9JJ37 291 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 GNRH1P01148 92 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 GYG1P46976 350 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 PRMT2P55345 433 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 SNAPC2Q13487 334 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 MTFR1Q15390 333 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 LMBR1LQ6UX01 489 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 RAET1EQ8TD07 263 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 HTATIP2Q9BUP3 242 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
CDK9-205ENST00000498339 FRAT2O75474 233 aaPredicted RBP14.8□□□□□ -0.04
CDK9-205ENST00000498339 HIBADHP31937 336 aaKnown RBP14.8□□□□□ -0.04
CDK9-205ENST00000498339 CACNB3P54284 484 aa14.8□□□□□ -0.04
CDK9-205ENST00000498339 FOXO4P98177 505 aa14.8□□□□□ -0.04
CDK9-205ENST00000498339 CHAF1AQ13111 956 aaPredicted RBP14.8□□□□□ -0.04
CDK9-205ENST00000498339 VPS37DQ86XT2 251 aa14.8□□□□□ -0.04
CDK9-205ENST00000498339 ERO1BQ86YB8 467 aa14.8□□□□□ -0.04
CDK9-205ENST00000498339 NKX2-3Q8TAU0 364 aa14.8□□□□□ -0.04
CDK9-205ENST00000498339 SHISA4Q96DD7 197 aa14.8□□□□□ -0.04
CDK9-205ENST00000498339 ZCCHC17Q9NP64 241 aaKnown RBP14.8□□□□□ -0.04
CDK9-205ENST00000498339 BIN2Q9UBW5 565 aaPredicted RBP14.8□□□□□ -0.04
CDK9-205ENST00000498339 SNCAIPQ9Y6H5 919 aa14.8□□□□□ -0.04
CDK9-205ENST00000498339 RANBP2P49792 3224 aaKnown RBP14.79□□□□□ -0.04
CDK9-205ENST00000498339 IRF6O14896 467 aa14.79□□□□□ -0.04
CDK9-205ENST00000498339 FMNL1O95466 1100 aaPredicted RBP14.79□□□□□ -0.04
CDK9-205ENST00000498339 PSMC4P43686 418 aa14.79□□□□□ -0.04
CDK9-205ENST00000498339 SLC17A8Q8NDX2 589 aa14.79□□□□□ -0.04
CDK9-205ENST00000498339 ZKSCAN4Q969J2 545 aaPredicted RBP14.79□□□□□ -0.04
CDK9-205ENST00000498339 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
CDK9-205ENST00000498339 IQSEC3Q9UPP2 1182 aaPredicted RBP14.79□□□□□ -0.04
CDK9-205ENST00000498339 COL6A3P12111 3177 aa14.78□□□□□ -0.04
CDK9-205ENST00000498339 MYPNQ86TC9 1320 aa14.78□□□□□ -0.04
CDK9-205ENST00000498339 DLL1O00548 723 aa14.78□□□□□ -0.04
CDK9-205ENST00000498339 HOXD10P28358 340 aa14.78□□□□□ -0.04
CDK9-205ENST00000498339 GRK4P32298 578 aa14.78□□□□□ -0.04
CDK9-205ENST00000498339 TDRD7Q8NHU6 1098 aaKnown RBP14.78□□□□□ -0.04
CDK9-205ENST00000498339 TEKT1Q969V4 418 aa14.78□□□□□ -0.04
CDK9-205ENST00000498339 HOOK2Q96ED9 719 aa14.78□□□□□ -0.04
CDK9-205ENST00000498339 OSBPP22059 807 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 PPIL2Q13356 520 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 UBE4AQ14139 1066 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 DCAF15Q66K64 600 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.77□□□□□ -0.05
CDK9-205ENST00000498339 TRIM47Q96LD4 638 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 RNF208Q9H0X6 261 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 SRRDQ9UH36 339 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 RIPOR2Q9Y4F9 1068 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 NR2E3Q9Y5X4 410 aa14.77□□□□□ -0.05
CDK9-205ENST00000498339 F6X3S4 739 aa14.76□□□□□ -0.05
CDK9-205ENST00000498339 CCL5P13501 91 aa14.76□□□□□ -0.05
CDK9-205ENST00000498339 UBXN2AP68543 259 aa14.76□□□□□ -0.05
CDK9-205ENST00000498339 FAM84BQ96KN1 310 aaPredicted RBP14.76□□□□□ -0.05
CDK9-205ENST00000498339 PRKRIP1Q9H875 184 aaPredicted RBP14.76□□□□□ -0.05
CDK9-205ENST00000498339 GRM8O00222 908 aa14.75□□□□□ -0.05
CDK9-205ENST00000498339 PDHXO00330 501 aa14.75□□□□□ -0.05
CDK9-205ENST00000498339 FARP2O94887 1054 aaPredicted RBP14.75□□□□□ -0.05
CDK9-205ENST00000498339 GJA8P48165 433 aa14.75□□□□□ -0.05
CDK9-205ENST00000498339 GRIK5Q16478 980 aa14.75□□□□□ -0.05
CDK9-205ENST00000498339 EPHA10Q5JZY3 1008 aa14.75□□□□□ -0.05
CDK9-205ENST00000498339 C17orf99Q6UX52 265 aa14.75□□□□□ -0.05
CDK9-205ENST00000498339 TBC1D22AQ8WUA7 517 aa14.75□□□□□ -0.05
CDK9-205ENST00000498339 ZNF341Q9BYN7 854 aa14.75□□□□□ -0.05
CDK9-205ENST00000498339 C9orf78Q9NZ63 289 aaPredicted RBP14.75□□□□□ -0.05
CDK9-205ENST00000498339 DOCK2Q92608 1830 aa14.74□□□□□ -0.05
CDK9-205ENST00000498339 GJB1P08034 283 aa14.74□□□□□ -0.05
CDK9-205ENST00000498339 CTGFP29279 349 aa14.74□□□□□ -0.05
CDK9-205ENST00000498339 PPATQ06203 517 aa14.74□□□□□ -0.05
CDK9-205ENST00000498339 CAVIN4Q5BKX8 364 aa14.74□□□□□ -0.05
CDK9-205ENST00000498339 BEND3Q5T5X7 828 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms