RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 TERF2IPQ9NYB0 399 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 MAP3K19Q56UN5 1328 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 PCDH11XQ9BZA7 1347 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 PCDH11YQ9BZA8 1340 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 RTL1A6NKG5 1358 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 C10orf71Q711Q0 1435 aa10.73□□□□□ -0.69
VPS45-210ENST00000497638 BNIP3LO60238 219 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 AMPHP49418 695 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 TGFB2P61812 414 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 FIGNL1Q6PIW4 674 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 AMIGO3Q86WK7 504 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 GOLGA6L1Q8N7Z2 621 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 TMC1Q8TDI8 760 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 EDARADDQ8WWZ3 215 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 RAPGEF4Q8WZA2 1011 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 A0A1W2PP64 1363 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 KIAA1551Q9HCM1 1747 aa10.72□□□□□ -0.69
VPS45-210ENST00000497638 SHISA8B8ZZ34 492 aa10.71□□□□□ -0.69
VPS45-210ENST00000497638 HTRA3P83110 453 aa10.71□□□□□ -0.69
VPS45-210ENST00000497638 MPRIPQ6WCQ1 1025 aa10.71□□□□□ -0.69
VPS45-210ENST00000497638 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
VPS45-210ENST00000497638 BCS1LQ9Y276 419 aa10.71□□□□□ -0.69
VPS45-210ENST00000497638 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 TATP17735 454 aaPredicted RBP10.7□□□□□ -0.7
VPS45-210ENST00000497638 SNRPNP63162 240 aaKnown RBP10.7□□□□□ -0.7
VPS45-210ENST00000497638 PLA2G4EQ3MJ16 856 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 ARHGAP27Q6ZUM4 889 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 WWC1Q8IX03 1113 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 C1orf216Q8TAB5 229 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 L3MBTL2Q969R5 705 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 COG3Q96JB2 828 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 COG6Q9Y2V7 657 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 ITGB4P16144 1822 aa10.7□□□□□ -0.7
VPS45-210ENST00000497638 PIK3CDO00329 1044 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 MMP10P09238 476 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 SKIP12755 728 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 AMPD1P23109 780 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 CTBSQ01459 385 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 EML3Q32P44 896 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 ARSJQ5FYB0 599 aaPredicted RBP10.69□□□□□ -0.7
VPS45-210ENST00000497638 NBPF6Q5VWK0 638 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
VPS45-210ENST00000497638 NBPF4Q96M43 638 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 ZCCHC2Q9C0B9 1178 aaKnown RBP10.69□□□□□ -0.7
VPS45-210ENST00000497638 SLC12A5Q9H2X9 1139 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 MKL2Q9ULH7 1088 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 PCDHGC4Q9Y5F7 938 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 MAP2P11137 1827 aaKnown RBP10.69□□□□□ -0.7
VPS45-210ENST00000497638 N4BP2Q86UW6 1770 aaPredicted RBP10.69□□□□□ -0.7
VPS45-210ENST00000497638 PKD1L3Q7Z443 1732 aa10.69□□□□□ -0.7
VPS45-210ENST00000497638 TNRC6CQ9HCJ0 1690 aaKnown RBP10.69□□□□□ -0.7
VPS45-210ENST00000497638 BRCA1P38398 1863 aaKnown RBP10.68□□□□□ -0.7
VPS45-210ENST00000497638 ARFGEF1Q9Y6D6 1849 aa10.68□□□□□ -0.7
VPS45-210ENST00000497638 TMEM229AB2RXF0 380 aa10.68□□□□□ -0.7
VPS45-210ENST00000497638 C2CD2LO14523 706 aa10.68□□□□□ -0.7
VPS45-210ENST00000497638 MSTNO14793 375 aa10.68□□□□□ -0.7
VPS45-210ENST00000497638 C9orf131Q5VYM1 1079 aa10.68□□□□□ -0.7
VPS45-210ENST00000497638 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
VPS45-210ENST00000497638 PUS7Q96PZ0 661 aaKnown RBP10.68□□□□□ -0.7
VPS45-210ENST00000497638 NDFIP2Q9NV92 336 aa10.68□□□□□ -0.7
VPS45-210ENST00000497638 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 A0A0G2JLW4 131 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 A6NJY4 79 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
VPS45-210ENST00000497638 ATP4AP20648 1035 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 SIK1P57059 783 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 SMIM5Q71RC9 77 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 NLRP8Q86W28 1048 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 USHBP1Q8N6Y0 703 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 LINC00116Q8NCU8 138 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 GGA1Q9UJY5 639 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 NOD1Q9Y239 953 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 KCPQ6ZWJ8 1503 aa10.67□□□□□ -0.7
VPS45-210ENST00000497638 LOC100996750A0A140TA64 210 aa10.66□□□□□ -0.7
VPS45-210ENST00000497638 CDK2AP1O14519 115 aa10.66□□□□□ -0.7
VPS45-210ENST00000497638 ATXN7O15265 892 aaPredicted RBP10.66□□□□□ -0.7
VPS45-210ENST00000497638 CYP27B1O15528 508 aa10.66□□□□□ -0.7
VPS45-210ENST00000497638 HSPA1AP0DMV8 641 aaKnown RBP10.66□□□□□ -0.7
VPS45-210ENST00000497638 HSPA1BP0DMV9 641 aaKnown RBP10.66□□□□□ -0.7
VPS45-210ENST00000497638 NLGN1Q8N2Q7 840 aa10.66□□□□□ -0.7
VPS45-210ENST00000497638 PIGBQ92521 554 aa10.66□□□□□ -0.7
VPS45-210ENST00000497638 SLC4A9Q96Q91 983 aa10.66□□□□□ -0.7
VPS45-210ENST00000497638 KRTAP4-6Q9BYQ5 205 aa10.66□□□□□ -0.7
VPS45-210ENST00000497638 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
VPS45-210ENST00000497638 C4AP0C0L4 1744 aa10.65□□□□□ -0.7
VPS45-210ENST00000497638 A0A1W2PNR3 127 aa10.65□□□□□ -0.7
VPS45-210ENST00000497638 BACH1O14867 736 aa10.65□□□□□ -0.7
VPS45-210ENST00000497638 DPEP1P16444 411 aa10.65□□□□□ -0.7
VPS45-210ENST00000497638 DNAAF2Q9NVR5 837 aaKnown RBP10.65□□□□□ -0.7
VPS45-210ENST00000497638 PCDHGA11Q9Y5H2 935 aa10.65□□□□□ -0.7
VPS45-210ENST00000497638 GJA3Q9Y6H8 435 aa10.65□□□□□ -0.7
VPS45-210ENST00000497638 INSRP06213 1382 aa10.65□□□□□ -0.71
VPS45-210ENST00000497638 TMF1P82094 1093 aa10.64□□□□□ -0.71
VPS45-210ENST00000497638 MTFR1Q15390 333 aa10.64□□□□□ -0.71
VPS45-210ENST00000497638 SLCO4C1Q6ZQN7 724 aa10.64□□□□□ -0.71
VPS45-210ENST00000497638 RNF181Q9P0P0 153 aa10.64□□□□□ -0.71
VPS45-210ENST00000497638 KIF24Q5T7B8 1368 aa10.64□□□□□ -0.71
VPS45-210ENST00000497638 DCDC2BA2VCK2 349 aa10.63□□□□□ -0.71
VPS45-210ENST00000497638 KHNYNO15037 678 aaKnown RBP10.63□□□□□ -0.71
VPS45-210ENST00000497638 RAD21O60216 631 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms