RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ASPSCR1Q9BZE9 553 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 ABCB6Q9NP58 842 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 LATS2Q9NRM7 1088 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 ZNRF3Q9ULT6 936 aa7.87□□□□□ -1.15
BRCA1-224ENST00000497488 B2RBV5 119 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 DDAH1O94760 285 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 ADH1AP07327 375 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 ZNF165P49910 485 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 TRIM32Q13049 653 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 AKAP4Q5JQC9 854 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 LSRQ86X29 649 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-224ENST00000497488 CHPFQ8IZ52 775 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 AFAP1L2Q8N4X5 818 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 KDF1Q8NAX2 398 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-224ENST00000497488 RBBP8NLQ8NC74 664 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-224ENST00000497488 ZNF280CQ8ND82 737 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 ATL2Q8NHH9 583 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 TTC8Q8TAM2 541 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 KLRG1Q96E93 195 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 ZNF512BQ96KM6 892 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-224ENST00000497488 SENP7Q9BQF6 1050 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 ENAMQ9NRM1 1142 aa7.86□□□□□ -1.15
BRCA1-224ENST00000497488 ABI2Q9NYB9 513 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-224ENST00000497488 GSG1L2A8MUP6 293 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 AKAP10O43572 662 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 RFPL3O75679 317 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 F13A1P00488 732 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 FAM153BP0C7A2 387 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 IMPDH2P12268 514 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 NEK2P51955 445 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 PABPC4Q13310 644 aaKnown RBP eCLIP7.85□□□□□ -1.15
BRCA1-224ENST00000497488 PEAR1Q5VY43 1037 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-224ENST00000497488 WWC2Q6AWC2 1192 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 TTBK2Q6IQ55 1244 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 KANK3Q6NY19 840 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 BNC2Q6ZN30 1099 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-224ENST00000497488 CCDC84Q86UT8 332 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-224ENST00000497488 TRIM42Q8IWZ5 723 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 RHBDD1Q8TEB9 315 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 HSH2DQ96JZ2 352 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 ZSCAN10Q96SZ4 725 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-224ENST00000497488 CEP44Q9C0F1 390 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 ZIM2Q9NZV7 527 aa7.85□□□□□ -1.15
BRCA1-224ENST00000497488 A0A0U1RQG5 324 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-224ENST00000497488 KATNA1O75449 491 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 FOSP01100 380 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-224ENST00000497488 FGAP02671 866 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 CES1P23141 567 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 CDC27P30260 824 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 PDE6BP35913 854 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 RPS26P62854 115 aaKnown RBP7.84□□□□□ -1.15
BRCA1-224ENST00000497488 LONRF2Q1L5Z9 754 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 CWF19L2Q2TBE0 894 aaKnown RBP7.84□□□□□ -1.15
BRCA1-224ENST00000497488 C6orf15Q6UXA7 325 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-224ENST00000497488 FAM178BQ8IXR5 827 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 REXO1Q8N1G1 1221 aaKnown RBP7.84□□□□□ -1.15
BRCA1-224ENST00000497488 MPNDQ8N594 471 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 EHBP1Q8NDI1 1231 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 SVIPQ8NHG7 77 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 SLC26A8Q96RN1 970 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 MAPRE3Q9UPY8 281 aa7.84□□□□□ -1.15
BRCA1-224ENST00000497488 ADH1CP00326 375 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 EDN3P14138 238 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 NR5A1Q13285 461 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 MPP2Q14168 576 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 CBX2Q14781 532 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-224ENST00000497488 PPP2R5EQ16537 467 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 MRM1Q6IN84 353 aaKnown RBP7.83□□□□□ -1.16
BRCA1-224ENST00000497488 TMEM214Q6NUQ4 689 aaKnown RBP7.83□□□□□ -1.16
BRCA1-224ENST00000497488 C19orf47Q8N9M1 422 aaKnown RBP7.83□□□□□ -1.16
BRCA1-224ENST00000497488 GATAD2BQ8WXI9 593 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 NAP1L4Q99733 375 aaKnown RBP7.83□□□□□ -1.16
BRCA1-224ENST00000497488 DZANK1Q9NVP4 752 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 GPC6Q9Y625 555 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-224ENST00000497488 TLL2Q9Y6L7 1015 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 MYO15BQ96JP2 1530 aa7.83□□□□□ -1.16
BRCA1-224ENST00000497488 FAM221AA4D161 298 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 ENC1O14682 589 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 PLA2G4AP47712 749 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 POU5F1BQ06416 359 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 ZC3H12BQ5HYM0 836 aaKnown RBP7.82□□□□□ -1.16
BRCA1-224ENST00000497488 TTC39BQ5VTQ0 682 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-224ENST00000497488 KSR2Q6VAB6 950 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 BTLAQ7Z6A9 289 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 RIN3Q8TB24 985 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 PPM1EQ8WY54 764 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 NLRP3Q96P20 1036 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 SPATA9Q9BWV2 254 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 CDH19Q9H159 772 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 LIN7BQ9HAP6 207 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 ZFYVE1Q9HBF4 777 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 ZDHHC3Q9NYG2 299 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 ANKIB1Q9P2G1 1089 aa7.82□□□□□ -1.16
BRCA1-224ENST00000497488 MEN1O00255 615 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 ADCY3O60266 1144 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 XYLBO75191 536 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 NR3C2P08235 984 aa7.81□□□□□ -1.16
BRCA1-224ENST00000497488 GRNP28799 593 aaKnown RBP7.81□□□□□ -1.16
BRCA1-224ENST00000497488 GTF2E1P29083 439 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 586 ms