RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 ZNF408Q9H9D4 720 aa9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 TTF2Q9UNY4 1162 aaKnown RBP9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 IQSEC3Q9UPP2 1182 aaPredicted RBP9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 JAG2Q9Y219 1238 aa9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 ZNF646O15015 1829 aaPredicted RBP9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 WNT10BO00744 389 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 CELF2O95319 508 aaKnown RBP9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 UQCRFS1P1P0C7P4 283 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 NUCB1Q02818 461 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 TNFAIP1Q13829 316 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 CFAP100Q494V2 611 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 PAXIP1Q6ZW49 1069 aaPredicted RBP9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 USP48Q86UV5 1035 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 SLF2Q8IX21 1173 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 SMC5Q8IY18 1101 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 C2orf69Q8N8R5 385 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 XAGE2Q96GT9 111 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 GLIS2Q9BZE0 524 aaPredicted RBP9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 GPR108Q9NPR9 543 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 TMOD2Q9NZR1 351 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 SERPINA10Q9UK55 444 aa9.98□□□□□ -0.81
SMARCD3-215ENST00000496530 ECE1P42892 770 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 TNNI2P48788 182 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 HDLBPQ00341 1268 aaKnown RBP9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 DEFB115Q30KQ5 88 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 TTC39AQ5SRH9 613 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 SPTY2D1Q68D10 685 aaPredicted RBP9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 CCDC102BQ68D86 513 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 MTMR14Q8NCE2 650 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 TEKT1Q969V4 418 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 KLRG1Q96E93 195 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 ECM29Q5VYK3 1845 aa9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 COL1A1P02452 1464 aaPredicted RBP9.97□□□□□ -0.81
SMARCD3-215ENST00000496530 ZBTB22O15209 634 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 EGFRP00533 1210 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 LDHBP07195 334 aaKnown RBP9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 CRKP46108 304 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 NBPF9Q3BBW0 867 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 TNNI3KQ59H18 835 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 CERS5Q8N5B7 392 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 MRIQ9BWK5 157 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 VEZTQ9HBM0 779 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 PPP2R3BQ9Y5P8 575 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 FPGT-TNNI3KV9GXZ4 949 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 PDS5AQ29RF7 1337 aaKnown RBP9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 SALL1Q9NSC2 1324 aa9.96□□□□□ -0.82
SMARCD3-215ENST00000496530 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 ADM5C9JUS6 153 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 TRAF5O00463 557 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 SPDYE6P0CI01 402 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 PHKA1P46020 1223 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 FKBP1BP68106 108 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 HTRA3P83110 453 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 TTLL12Q14166 644 aaPredicted RBP9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 DZIP1Q86YF9 867 aaKnown RBP9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 EAF2Q96CJ1 260 aaPredicted RBP9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 GPATCH3Q96I76 525 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 GBA2Q9HCG7 927 aaPredicted RBP9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 ABCF2Q9UG63 623 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 MKRN1Q9UHC7 482 aaKnown RBP9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 TLL2Q9Y6L7 1015 aa9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.95□□□□□ -0.82
SMARCD3-215ENST00000496530 CNTNAP1P78357 1384 aa9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 MAP4K4O95819 1239 aaPredicted RBP9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 ADORA1P30542 326 aa9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 GSTO1P78417 241 aa9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 HHIPL2Q6UWX4 724 aa9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 ERICH6Q7L0X2 663 aa9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 ARMC9Q7Z3E5 817 aa9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 OTUD7AQ8TE49 926 aaPredicted RBP9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 CDCA5Q96FF9 252 aa9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 NOL10Q9BSC4 688 aaKnown RBP9.94□□□□□ -0.82
SMARCD3-215ENST00000496530 CLRN2A0PK11 232 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 RASSF10A6NK89 507 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 PPP1R12BO60237 982 aaPredicted RBP9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 IGSF3O75054 1194 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 LDHCP07864 332 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 PDE4AP27815 886 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 ARID4AP29374 1257 aaPredicted RBP9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 HUNKP57058 714 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 SUPT20HL1Q3ZLR7 823 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 CST9Q5W186 159 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 TSHZ3Q63HK5 1081 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 SPATA5Q8NB90 893 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 RILPL2Q969X0 211 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 HOOK2Q96ED9 719 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 ZBED3Q96IU2 234 aaPredicted RBP9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 HHIPL1Q96JK4 782 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 PRMT6Q96LA8 375 aaPredicted RBP9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 ZDHHC15Q96MV8 337 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 DBNDD2Q9BQY9 259 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 BOLA2Q9H3K6 86 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 LRP2BPQ9P2M1 347 aa9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 POLR2AP24928 1970 aaKnown RBP9.93□□□□□ -0.82
SMARCD3-215ENST00000496530 ASTN2O75129 1339 aaPredicted RBP9.92□□□□□ -0.82
SMARCD3-215ENST00000496530 PRDX5P30044 214 aa9.92□□□□□ -0.82
SMARCD3-215ENST00000496530 GRM1Q13255 1194 aa9.92□□□□□ -0.82
SMARCD3-215ENST00000496530 RASGRF1Q13972 1273 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms