RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 JAG2Q9Y219 1238 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 PDS5AQ29RF7 1337 aaKnown RBP10.3□□□□□ -0.76
U2AF1-212ENST00000496462 GLTPD2A6NH11 291 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
U2AF1-212ENST00000496462 ZAP70P43403 619 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 GMPSP49915 693 aaPredicted RBP10.3□□□□□ -0.76
U2AF1-212ENST00000496462 KIF4BQ2VIQ3 1234 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 HAUS7Q99871 368 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 USP40Q9NVE5 1235 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 PSMD14O00487 310 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 ADORA1P30542 326 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 CXCL9Q07325 125 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 GPR101Q96P66 508 aaPredicted RBP10.3□□□□□ -0.76
U2AF1-212ENST00000496462 DBNLQ9UJU6 430 aaKnown RBP10.3□□□□□ -0.76
U2AF1-212ENST00000496462 SCN7AQ01118 1682 aa10.3□□□□□ -0.76
U2AF1-212ENST00000496462 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
U2AF1-212ENST00000496462 IL1R1P14778 569 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 PDE4BQ07343 736 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 USP50Q70EL3 339 aaPredicted RBP10.29□□□□□ -0.76
U2AF1-212ENST00000496462 ARMC9Q7Z3E5 817 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 APPBP2Q92624 585 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 ANO2Q9NQ90 1003 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 ARID4AP29374 1257 aaPredicted RBP10.29□□□□□ -0.76
U2AF1-212ENST00000496462 CFAP100Q494V2 611 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 CCDC178Q5BJE1 867 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 SLC51AQ86UW1 340 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 MKNK2Q9HBH9 465 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 HELLSQ9NRZ9 838 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 HMG20BQ9P0W2 317 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 FAM205AQ6ZU69 1335 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 IGHDP01880 384 aa10.29□□□□□ -0.76
U2AF1-212ENST00000496462 IMMTQ16891 758 aaKnown RBP10.29□□□□□ -0.76
U2AF1-212ENST00000496462 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
U2AF1-212ENST00000496462 EPHX2P34913 555 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 ZNF444Q8N0Y2 327 aaPredicted RBP10.28□□□□□ -0.76
U2AF1-212ENST00000496462 SERPINA10Q9UK55 444 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 RAD50Q92878 1312 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 UBE3CQ15386 1083 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 TTC22Q5TAA0 569 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 HHIPL2Q6UWX4 724 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 USP48Q86UV5 1035 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 CWC22Q9HCG8 908 aaKnown RBP10.28□□□□□ -0.76
U2AF1-212ENST00000496462 FGFR2P21802 821 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 CRKP46108 304 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 SCNN1DP51172 638 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 PRELPP51888 382 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 RASGRF1Q13972 1273 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 MCMDC2Q4G0Z9 681 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 C2orf69Q8N8R5 385 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 SLC4A4Q9Y6R1 1079 aa10.28□□□□□ -0.76
U2AF1-212ENST00000496462 U3KPZ7 1027 aaPredicted RBP10.28□□□□□ -0.76
U2AF1-212ENST00000496462 AFDNP55196 1824 aaKnown RBP10.28□□□□□ -0.76
U2AF1-212ENST00000496462 PICALMQ13492 652 aa10.27□□□□□ -0.76
U2AF1-212ENST00000496462 BMP2KLQ5H9B9 411 aa10.27□□□□□ -0.76
U2AF1-212ENST00000496462 STAP2Q9UGK3 403 aa10.27□□□□□ -0.76
U2AF1-212ENST00000496462 CSADQ9Y600 493 aa10.27□□□□□ -0.76
U2AF1-212ENST00000496462 TOMM70O94826 608 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 HSP90AA1P07900 732 aaKnown RBP10.27□□□□□ -0.77
U2AF1-212ENST00000496462 PSMA5P28066 241 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 KRT32Q14532 448 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 CDC37L1Q7L3B6 337 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 DHX36Q9H2U1 1008 aaKnown RBP10.27□□□□□ -0.77
U2AF1-212ENST00000496462 ZNF408Q9H9D4 720 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 COL24A1Q17RW2 1714 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 KIF3CO14782 793 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 BTDP43251 543 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 TBC1D10BQ4KMP7 808 aaPredicted RBP10.27□□□□□ -0.77
U2AF1-212ENST00000496462 BEGAINQ9BUH8 593 aa10.27□□□□□ -0.77
U2AF1-212ENST00000496462 VIL1P09327 827 aaKnown RBP10.26□□□□□ -0.77
U2AF1-212ENST00000496462 C7orf43Q8WVR3 580 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 SH2D4AQ9H788 454 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 PICK1Q9NRD5 415 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 NAP1L2Q9ULW6 460 aaPredicted RBP10.26□□□□□ -0.77
U2AF1-212ENST00000496462 PPP2R3BQ9Y5P8 575 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 IREB2P48200 963 aaKnown RBP10.26□□□□□ -0.77
U2AF1-212ENST00000496462 CPLX2Q6PUV4 134 aaKnown RBP10.26□□□□□ -0.77
U2AF1-212ENST00000496462 CWC27Q6UX04 472 aaKnown RBP10.26□□□□□ -0.77
U2AF1-212ENST00000496462 SMC1BQ8NDV3 1235 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 ZC3H15Q8WU90 426 aaKnown RBP10.26□□□□□ -0.77
U2AF1-212ENST00000496462 ARFGEF2Q9Y6D5 1785 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 SIRT2Q8IXJ6 389 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 MRIQ9BWK5 157 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 MYOZ2Q9NPC6 264 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 NUP98P52948 1817 aa10.26□□□□□ -0.77
U2AF1-212ENST00000496462 MINDY4BA8MYZ0 360 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 PDE6AP16499 860 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 NT5C2P49902 561 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 KRT26Q7Z3Y9 468 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 PLEKHM2Q8IWE5 1019 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 CCAR1Q8IX12 1150 aaKnown RBP10.25□□□□□ -0.77
U2AF1-212ENST00000496462 ZNF609O15014 1411 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 MCM9Q9NXL9 1143 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 SALL1Q9NSC2 1324 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 RPAP1Q9BWH6 1393 aaPredicted RBP10.25□□□□□ -0.77
U2AF1-212ENST00000496462 ZNF213O14771 459 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 MBD4O95243 580 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 ATP8A2Q9NTI2 1148 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 ZNF532Q9HCE3 1301 aa10.25□□□□□ -0.77
U2AF1-212ENST00000496462 MPHOSPH10O00566 681 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms