RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SPATA31A5Q5VU36 1347 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 SPATA31A7Q8IWB4 1347 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 LAMB2P55268 1798 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 TCRBV5S4A2TA0A5A2 114 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 GUCY1B3Q02153 619 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 CCDC73Q6ZRK6 1079 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 USP28Q96RU2 1077 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
CMSS1-208ENST00000496116 ORC3Q9UBD5 711 aaPredicted RBP12.94□□□□□ -0.34
CMSS1-208ENST00000496116 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
CMSS1-208ENST00000496116 DOCK2Q92608 1830 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 GOLGA6L6A8MZA4 724 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
CMSS1-208ENST00000496116 CDKL5O76039 1030 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 TPM3P06753 285 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 ITPK1Q13572 414 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 RASGRF1Q13972 1273 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 ALX1Q15699 326 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 ANO6Q4KMQ2 910 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 CPLX2Q6PUV4 134 aaKnown RBP12.94□□□□□ -0.34
CMSS1-208ENST00000496116 CCAR1Q8IX12 1150 aaKnown RBP12.94□□□□□ -0.34
CMSS1-208ENST00000496116 TMEM87BQ96K49 555 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 SEC31BQ9NQW1 1179 aa12.94□□□□□ -0.34
CMSS1-208ENST00000496116 PPFIA3O75145 1194 aa12.93□□□□□ -0.34
CMSS1-208ENST00000496116 NTSR2O95665 410 aa12.93□□□□□ -0.34
CMSS1-208ENST00000496116 ADRA2BP18089 450 aa12.93□□□□□ -0.34
CMSS1-208ENST00000496116 ME1P48163 572 aa12.93□□□□□ -0.34
CMSS1-208ENST00000496116 BRAPQ7Z569 592 aa12.93□□□□□ -0.34
CMSS1-208ENST00000496116 MAGEB6Q8N7X4 407 aa12.93□□□□□ -0.34
CMSS1-208ENST00000496116 FBXO18Q8NFZ0 1043 aa12.93□□□□□ -0.34
CMSS1-208ENST00000496116 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
CMSS1-208ENST00000496116 MYH14Q7Z406 1995 aaKnown RBP12.93□□□□□ -0.34
CMSS1-208ENST00000496116 GNAT2P19087 354 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 METAP2P50579 478 aaKnown RBP eCLIP12.92□□□□□ -0.34
CMSS1-208ENST00000496116 TERF1P54274 439 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 CLEC4GQ6UXB4 293 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 TBC1D10CQ8IV04 446 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 CDC5LQ99459 802 aaKnown RBP12.92□□□□□ -0.34
CMSS1-208ENST00000496116 NAPBQ9H115 298 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 RTEL1Q9NZ71 1219 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 SH2B2O14492 632 aaPredicted RBP12.92□□□□□ -0.34
CMSS1-208ENST00000496116 KINO60870 393 aaKnown RBP12.92□□□□□ -0.34
CMSS1-208ENST00000496116 TPM2P07951 284 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 ILDR1Q86SU0 546 aaPredicted RBP12.92□□□□□ -0.34
CMSS1-208ENST00000496116 IFNL3Q8IZI9 196 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 FTOQ9C0B1 505 aaKnown RBP eCLIP12.92□□□□□ -0.34
CMSS1-208ENST00000496116 CNNM2Q9H8M5 875 aa12.92□□□□□ -0.34
CMSS1-208ENST00000496116 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 C4BP0C0L5 1744 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 MBD4O95243 580 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 FAM160A1Q05DH4 1040 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 KCNG4Q8TDN1 519 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 NACAP1Q9BZK3 213 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 CBX8Q9HC52 389 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
CMSS1-208ENST00000496116 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
CMSS1-208ENST00000496116 B4E1Z4 1266 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 ZNF165P49910 485 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 CHRNDQ07001 517 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 SF3A1Q15459 793 aaKnown RBP12.91□□□□□ -0.34
CMSS1-208ENST00000496116 ADALQ6DHV7 355 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 CYB5R4Q7L1T6 521 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 LUZP1Q86V48 1076 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 NUTM2AQ8IVF1 878 aaPredicted RBP12.91□□□□□ -0.34
CMSS1-208ENST00000496116 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
CMSS1-208ENST00000496116 BCORQ6W2J9 1755 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 CHD4Q14839 1912 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 COL5A3P25940 1745 aaPredicted RBP12.9□□□□□ -0.34
CMSS1-208ENST00000496116 YEATS4O95619 227 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 STK38Q15208 465 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 APOA5Q6Q788 366 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 NFXL1Q6ZNB6 911 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 RAB11FIP4Q86YS3 637 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 KRT23Q9C075 422 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 PNPLA7Q6ZV29 1317 aa12.9□□□□□ -0.34
CMSS1-208ENST00000496116 A0A1W2PQ27 194 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 A0A1W2PQ64 194 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 A0A1W2PQD8 194 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 SNAP23O00161 211 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 ZBTB43O43298 467 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 LIFRP42702 1097 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 BCAMP50895 628 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 SNW1Q13573 536 aaKnown RBP12.89□□□□□ -0.35
CMSS1-208ENST00000496116 STX1AQ16623 288 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 MYSM1Q5VVJ2 828 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 OTUD7BQ6GQQ9 843 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 SGMS1Q86VZ5 419 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 FSIP1Q8NA03 581 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 LINC00301Q8NCQ3 95 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 TDRD7Q8NHU6 1098 aaKnown RBP12.89□□□□□ -0.35
CMSS1-208ENST00000496116 PIBF1Q8WXW3 757 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
CMSS1-208ENST00000496116 GOLPH3LQ9H4A5 285 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 ARMT1Q9H993 441 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 LRP2BPQ9P2M1 347 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 NEDD4P46934 1319 aa12.89□□□□□ -0.35
CMSS1-208ENST00000496116 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms