RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 HMGB1P09429 215 aaKnown RBP19.47■□□□□ 0.71
HLA-A-208ENST00000496081 ALDH1B1P30837 517 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 CHAF1AQ13111 956 aaPredicted RBP19.47■□□□□ 0.71
HLA-A-208ENST00000496081 TOB2Q14106 344 aaPredicted RBP19.47■□□□□ 0.71
HLA-A-208ENST00000496081 ZNF804AQ7Z570 1209 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 LCORLQ8N3X6 602 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 TBC1D16Q8TBP0 767 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 ZNF384Q8TF68 577 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 MASTLQ96GX5 879 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
HLA-A-208ENST00000496081 POLLQ9UGP5 575 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 ATP6V0A2Q9Y487 856 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 PATL2C9JE40 543 aaKnown RBP19.47■□□□□ 0.71
HLA-A-208ENST00000496081 APPP05067 770 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 HAND2P61296 217 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 ANKRD1Q15327 319 aa19.47■□□□□ 0.71
HLA-A-208ENST00000496081 ZNF213O14771 459 aa19.46■□□□□ 0.71
HLA-A-208ENST00000496081 ALX1Q15699 326 aa19.46■□□□□ 0.71
HLA-A-208ENST00000496081 DHX32Q7L7V1 743 aaKnown RBP19.46■□□□□ 0.71
HLA-A-208ENST00000496081 MIGA1Q8NAN2 632 aa19.46■□□□□ 0.71
HLA-A-208ENST00000496081 TPCN1Q9ULQ1 816 aa19.46■□□□□ 0.71
HLA-A-208ENST00000496081 ME3Q16798 604 aa19.45■□□□□ 0.7
HLA-A-208ENST00000496081 NSUN4Q96CB9 384 aaKnown RBP19.45■□□□□ 0.7
HLA-A-208ENST00000496081 EPB41L4AQ9HCS5 686 aaPredicted RBP19.45■□□□□ 0.7
HLA-A-208ENST00000496081 SH2B1Q9NRF2 756 aaPredicted RBP19.45■□□□□ 0.7
HLA-A-208ENST00000496081 JAG2Q9Y219 1238 aa19.45■□□□□ 0.7
HLA-A-208ENST00000496081 GSG1L2A8MUP6 293 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 PRKAB2O43741 272 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 GNAT2P19087 354 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 PRDX5P30044 214 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 EXOSC10Q01780 885 aaKnown RBP19.44■□□□□ 0.7
HLA-A-208ENST00000496081 NAA16Q6N069 864 aaPredicted RBP19.44■□□□□ 0.7
HLA-A-208ENST00000496081 IFNL3Q8IZI9 196 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
HLA-A-208ENST00000496081 ZMYM6O95789 1325 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 NUCB2P80303 420 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 MECOMQ03112 1051 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 Q6ZUG5 572 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 C2CD5Q86YS7 1000 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 CD209Q9NNX6 404 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 SALL1Q9NSC2 1324 aa19.44■□□□□ 0.7
HLA-A-208ENST00000496081 MAGEB6P1A0A0J9YX57 407 aa19.43■□□□□ 0.7
HLA-A-208ENST00000496081 C6orf229H3BNL8 230 aa19.43■□□□□ 0.7
HLA-A-208ENST00000496081 PKP1Q13835 747 aa19.43■□□□□ 0.7
HLA-A-208ENST00000496081 OLFM4Q6UX06 510 aa19.43■□□□□ 0.7
HLA-A-208ENST00000496081 WDR66Q8TBY9 1149 aa19.43■□□□□ 0.7
HLA-A-208ENST00000496081 RIOK1Q9BRS2 568 aaKnown RBP19.43■□□□□ 0.7
HLA-A-208ENST00000496081 NBPF3Q9H094 633 aa19.43■□□□□ 0.7
HLA-A-208ENST00000496081 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
HLA-A-208ENST00000496081 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
HLA-A-208ENST00000496081 IL1R1P14778 569 aa19.42■□□□□ 0.7
HLA-A-208ENST00000496081 ST3GAL1Q11201 340 aa19.42■□□□□ 0.7
HLA-A-208ENST00000496081 ZNF622Q969S3 477 aaKnown RBP eCLIP19.42■□□□□ 0.7
HLA-A-208ENST00000496081 H0YIN7 160 aa19.42■□□□□ 0.7
HLA-A-208ENST00000496081 SPTY2D1Q68D10 685 aaPredicted RBP19.42■□□□□ 0.7
HLA-A-208ENST00000496081 STYK1Q6J9G0 422 aa19.42■□□□□ 0.7
HLA-A-208ENST00000496081 MAST2Q6P0Q8 1798 aa19.42■□□□□ 0.7
HLA-A-208ENST00000496081 CCDC83Q8IWF9 413 aa19.42■□□□□ 0.7
HLA-A-208ENST00000496081 LRRC2Q9BYS8 371 aa19.42■□□□□ 0.7
HLA-A-208ENST00000496081 NAPBQ9H115 298 aa19.42■□□□□ 0.7
HLA-A-208ENST00000496081 DUOX1Q9NRD9 1551 aa19.41■□□□□ 0.7
HLA-A-208ENST00000496081 TMED8Q6PL24 325 aaPredicted RBP19.41■□□□□ 0.7
HLA-A-208ENST00000496081 TBC1D10CQ8IV04 446 aa19.41■□□□□ 0.7
HLA-A-208ENST00000496081 MPNDQ8N594 471 aa19.41■□□□□ 0.7
HLA-A-208ENST00000496081 AGXT2Q9BYV1 514 aa19.41■□□□□ 0.7
HLA-A-208ENST00000496081 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.41■□□□□ 0.7
HLA-A-208ENST00000496081 DYNLL1P63167 89 aaKnown RBP19.4■□□□□ 0.7
HLA-A-208ENST00000496081 NECAB1Q8N987 351 aa19.4■□□□□ 0.7
HLA-A-208ENST00000496081 NCOA7Q8NI08 942 aa19.4■□□□□ 0.7
HLA-A-208ENST00000496081 BRF1Q92994 677 aa19.4■□□□□ 0.7
HLA-A-208ENST00000496081 NACAP1Q9BZK3 213 aa19.4■□□□□ 0.7
HLA-A-208ENST00000496081 ZDHHC9Q9Y397 364 aa19.4■□□□□ 0.7
HLA-A-208ENST00000496081 IGSF3O75054 1194 aa19.39■□□□□ 0.7
HLA-A-208ENST00000496081 CHRNA5P30532 468 aa19.39■□□□□ 0.7
HLA-A-208ENST00000496081 CHST3Q7LGC8 479 aa19.39■□□□□ 0.7
HLA-A-208ENST00000496081 MB21D2Q8IYB1 491 aaPredicted RBP19.39■□□□□ 0.7
HLA-A-208ENST00000496081 LDHBP07195 334 aaKnown RBP19.39■□□□□ 0.69
HLA-A-208ENST00000496081 MCM4P33991 863 aa19.39■□□□□ 0.69
HLA-A-208ENST00000496081 DPP8Q6V1X1 898 aaPredicted RBP19.39■□□□□ 0.69
HLA-A-208ENST00000496081 KIAA1551Q9HCM1 1747 aa19.38■□□□□ 0.69
HLA-A-208ENST00000496081 TDO2P48775 406 aa19.38■□□□□ 0.69
HLA-A-208ENST00000496081 FGD1P98174 961 aa19.38■□□□□ 0.69
HLA-A-208ENST00000496081 DZIP1Q86YF9 867 aaKnown RBP19.38■□□□□ 0.69
HLA-A-208ENST00000496081 FBXL16Q8N461 479 aa19.38■□□□□ 0.69
HLA-A-208ENST00000496081 SDR42E1Q8WUS8 393 aa19.38■□□□□ 0.69
HLA-A-208ENST00000496081 TMX4Q9H1E5 349 aaPredicted RBP19.38■□□□□ 0.69
HLA-A-208ENST00000496081 SMC3Q9UQE7 1217 aa19.38■□□□□ 0.69
HLA-A-208ENST00000496081 SLX4Q8IY92 1834 aa19.38■□□□□ 0.69
HLA-A-208ENST00000496081 RIMBP2O15034 1052 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 ZBTB7AO95365 584 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 MCM5P33992 734 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 GRIK5Q16478 980 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 RALYLQ86SE5 291 aaKnown RBP19.37■□□□□ 0.69
HLA-A-208ENST00000496081 SLC16A10Q8TF71 515 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 ANTXR2P58335 489 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 CTDSPL2Q05D32 466 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 TRDNQ13061 729 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 STK3Q13188 491 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 COA1Q9GZY4 146 aa19.37■□□□□ 0.69
HLA-A-208ENST00000496081 AATFQ9NY61 560 aaKnown RBP eCLIP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms