RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 KRT86O43790 486 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 GNAI3P08754 354 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 DUSP27Q5VZP5 1158 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 CCHCR1Q8TD31 782 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 TBC1D2BQ9UPU7 963 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 RAD50Q92878 1312 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 KCNA4P22459 653 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 PLEKHO1Q53GL0 409 aaPredicted RBP4.29□□□□□ -1.72
PHC3-215ENST00000495893 RNF17Q9BXT8 1623 aaKnown RBP4.29□□□□□ -1.72
PHC3-215ENST00000495893 LONP1P36776 959 aaKnown RBP4.29□□□□□ -1.72
PHC3-215ENST00000495893 NOP2P46087 812 aaKnown RBP4.29□□□□□ -1.72
PHC3-215ENST00000495893 BRD3Q15059 726 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 CCDC26Q8TAB7 109 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 TRIM6Q9C030 488 aaPredicted RBP4.29□□□□□ -1.72
PHC3-215ENST00000495893 BAIAP2L1Q9UHR4 511 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 HDAC9Q9UKV0 1011 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 SSX2IPQ9Y2D8 614 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 OAS2P29728 719 aaKnown RBP4.29□□□□□ -1.72
PHC3-215ENST00000495893 GNAI1P63096 354 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 SEPT2Q15019 361 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 CTNNA3Q9UI47 895 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 ADGRL3Q9HAR2 1447 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 SPAG1Q07617 926 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 TRIM68Q6AZZ1 485 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 IFT20Q8IY31 132 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 ARHGAP18Q8N392 663 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 FAM210AQ96ND0 272 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 MIS12Q9H081 205 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 ITGB1BP2Q9UKP3 347 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 TACC3Q9Y6A5 838 aa4.29□□□□□ -1.72
PHC3-215ENST00000495893 A0A087WUV0 522 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 GOLGA6BA6NDN3 693 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 MTMR3Q13615 1198 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 ZNF652Q9Y2D9 606 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 NSD2O96028 1365 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 GCC2Q8IWJ2 1684 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 TET3O43151 1660 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 CCDC69A6NI79 296 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 NEK2P51955 445 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 RAP1GDS1P52306 607 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 DDB1Q16531 1140 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 CAMK4Q16566 473 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 CCDC102BQ68D86 513 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 GPR161Q8N6U8 529 aaKnown RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 FAM200AQ8TCP9 573 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 TEX13AQ9BXU3 409 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 EVCP57679 992 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 PHEXP78562 749 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 BASP1P80723 227 aaKnown RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 FBXO31Q5XUX0 539 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 KRT28Q7Z3Y7 464 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 CHCHD3Q9NX63 227 aaKnown RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 RANBP1P43487 201 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 MIS18AQ9NYP9 233 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 ELP1O95163 1332 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 GOLGA8KD6RF30 607 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 GJC2Q5T442 439 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 HEATR3Q7Z4Q2 680 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 BAG1Q99933 345 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.28□□□□□ -1.723e-6■□□□□ 9.6
PHC3-215ENST00000495893 UTP6Q9NYH9 597 aaKnown RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 FLOT1O75955 427 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 UBASH3AP57075 661 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 IDI1Q13907 227 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 CCDC96Q2M329 555 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 VSIG1Q86XK7 387 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 PNISRQ8TF01 805 aaKnown RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 RPGRIP1Q96KN7 1286 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 UNC13BO14795 1591 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 SKOR1P84550 965 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 CWC27Q6UX04 472 aaKnown RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 LTV1Q96GA3 475 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 PRAM1Q96QH2 718 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 RMND1Q9NWS8 449 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 RRP15Q9Y3B9 282 aaKnown RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 PPIP5K1Q6PFW1 1433 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 CCDC159P0C7I6 412 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 MX1P20591 662 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 U2AF2P26368 475 aaKnown RBP eCLIP4.28□□□□□ -1.721e-9■■□□□ 12.7
PHC3-215ENST00000495893 WASHC4Q2M389 1173 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 USP37Q86T82 979 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 TBC1D5Q92609 795 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 BEGAINQ9BUH8 593 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 ZSWIM4Q9H7M6 989 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 KCNK9Q9NPC2 374 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 ATP7BP35670 1465 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 PALM3A6NDB9 673 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 SKIP12755 728 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 PRPF4BQ13523 1007 aaKnown RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 ST13P4Q8IZP2 240 aaPredicted RBP4.28□□□□□ -1.72
PHC3-215ENST00000495893 PIBF1Q8WXW3 757 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 RAB34Q9BZG1 259 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 COMMD10Q9Y6G5 202 aa4.28□□□□□ -1.72
PHC3-215ENST00000495893 UBTFL1P0CB47 393 aaPredicted RBP4.28□□□□□ -1.73
PHC3-215ENST00000495893 MTIF2P46199 727 aaKnown RBP4.28□□□□□ -1.73
PHC3-215ENST00000495893 MMS22LQ6ZRQ5 1243 aa4.28□□□□□ -1.73
PHC3-215ENST00000495893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.28□□□□□ -1.73
PHC3-215ENST00000495893 TRAK1Q9UPV9 953 aa4.28□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms