RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 CELF1Q92879 486 aaKnown RBP18.57■□□□□ 0.56
SHISA5-216ENST00000494854 ARAP2Q8WZ64 1704 aa18.56■□□□□ 0.56
SHISA5-216ENST00000494854 RNF113AO15541 343 aaKnown RBP18.56■□□□□ 0.56
SHISA5-216ENST00000494854 RPS6KB1P23443 525 aa18.56■□□□□ 0.56
SHISA5-216ENST00000494854 RPS8P62241 208 aaKnown RBP18.56■□□□□ 0.56
SHISA5-216ENST00000494854 CCDC152Q4G0S7 254 aa18.56■□□□□ 0.56
SHISA5-216ENST00000494854 FOXD4L5Q5VV16 416 aaPredicted RBP18.56■□□□□ 0.56
SHISA5-216ENST00000494854 DPP8Q6V1X1 898 aaPredicted RBP18.56■□□□□ 0.56
SHISA5-216ENST00000494854 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
SHISA5-216ENST00000494854 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
SHISA5-216ENST00000494854 SCN4AP35499 1836 aa18.56■□□□□ 0.56
SHISA5-216ENST00000494854 SLFNL1Q499Z3 407 aa18.55■□□□□ 0.56
SHISA5-216ENST00000494854 L1TD1Q5T7N2 865 aaKnown RBP18.55■□□□□ 0.56
SHISA5-216ENST00000494854 LARGE2Q8N3Y3 721 aa18.55■□□□□ 0.56
SHISA5-216ENST00000494854 ALDH8A1Q9H2A2 487 aaPredicted RBP18.55■□□□□ 0.56
SHISA5-216ENST00000494854 LMBRD1Q9NUN5 540 aa18.55■□□□□ 0.56
SHISA5-216ENST00000494854 WDR33Q9C0J8 1336 aaKnown RBP18.55■□□□□ 0.56
SHISA5-216ENST00000494854 KLHL40Q2TBA0 621 aa18.55■□□□□ 0.56
SHISA5-216ENST00000494854 LRRFIP1Q32MZ4 808 aaKnown RBP18.55■□□□□ 0.56
SHISA5-216ENST00000494854 DDX49Q9Y6V7 483 aaKnown RBP18.55■□□□□ 0.56
SHISA5-216ENST00000494854 ZNF541Q9H0D2 1346 aa18.54■□□□□ 0.56
SHISA5-216ENST00000494854 COL9A3Q14050 684 aaPredicted RBP18.54■□□□□ 0.56
SHISA5-216ENST00000494854 SCARF1Q14162 830 aa18.54■□□□□ 0.56
SHISA5-216ENST00000494854 ANKRD1Q15327 319 aa18.54■□□□□ 0.56
SHISA5-216ENST00000494854 CCDC83Q8IWF9 413 aa18.54■□□□□ 0.56
SHISA5-216ENST00000494854 GPC2Q8N158 579 aa18.54■□□□□ 0.56
SHISA5-216ENST00000494854 DSCC1Q9BVC3 393 aa18.54■□□□□ 0.56
SHISA5-216ENST00000494854 SMC3Q9UQE7 1217 aa18.54■□□□□ 0.56
SHISA5-216ENST00000494854 COL4A5P29400 1685 aa18.54■□□□□ 0.56
SHISA5-216ENST00000494854 MAST3O60307 1309 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 FSD2A1L4K1 749 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 IQCA1LA6NCM1 817 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 GOLGA6L3A6NEY3 463 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 PDE8BO95263 885 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 CYP21A2P08686 494 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 ME3Q16798 604 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 SMC1BQ8NDV3 1235 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 TCHHQ07283 1943 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 PPIP5K2O43314 1243 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 ZAP70P43403 619 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 EIF6P56537 245 aaKnown RBP18.53■□□□□ 0.56
SHISA5-216ENST00000494854 TPCN1Q9ULQ1 816 aa18.53■□□□□ 0.56
SHISA5-216ENST00000494854 MROH5Q6ZUA9 1318 aa18.52■□□□□ 0.56
SHISA5-216ENST00000494854 MYO5AQ9Y4I1 1855 aaKnown RBP18.52■□□□□ 0.56
SHISA5-216ENST00000494854 ZFYP08048 801 aaPredicted RBP18.52■□□□□ 0.56
SHISA5-216ENST00000494854 KIAA2012Q0VF49 1180 aa18.52■□□□□ 0.56
SHISA5-216ENST00000494854 NIM1KQ8IY84 436 aa18.52■□□□□ 0.56
SHISA5-216ENST00000494854 ZNF512BQ96KM6 892 aaPredicted RBP18.52■□□□□ 0.56
SHISA5-216ENST00000494854 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.56
SHISA5-216ENST00000494854 NEK1Q96PY6 1258 aa18.52■□□□□ 0.56
SHISA5-216ENST00000494854 SEC31BQ9NQW1 1179 aa18.52■□□□□ 0.56
SHISA5-216ENST00000494854 COL4A1P02462 1669 aa18.51■□□□□ 0.55
SHISA5-216ENST00000494854 PRPF40AO75400 957 aaKnown RBP18.51■□□□□ 0.55
SHISA5-216ENST00000494854 ST3GAL1Q11201 340 aa18.51■□□□□ 0.55
SHISA5-216ENST00000494854 AOC3Q16853 763 aa18.51■□□□□ 0.55
SHISA5-216ENST00000494854 RTL9Q8NET4 1388 aa18.51■□□□□ 0.55
SHISA5-216ENST00000494854 M0R2C6 588 aa18.51■□□□□ 0.55
SHISA5-216ENST00000494854 HSPD1P10809 573 aaKnown RBP18.51■□□□□ 0.55
SHISA5-216ENST00000494854 MCAMP43121 646 aa18.51■□□□□ 0.55
SHISA5-216ENST00000494854 TOB2Q14106 344 aaPredicted RBP18.51■□□□□ 0.55
SHISA5-216ENST00000494854 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
SHISA5-216ENST00000494854 DUOX1Q9NRD9 1551 aa18.5■□□□□ 0.55
SHISA5-216ENST00000494854 GJB2P29033 226 aa18.5■□□□□ 0.55
SHISA5-216ENST00000494854 APLP1P51693 650 aa18.5■□□□□ 0.55
SHISA5-216ENST00000494854 OSBP2Q969R2 916 aa18.5■□□□□ 0.55
SHISA5-216ENST00000494854 PODXL2Q9NZ53 605 aa18.5■□□□□ 0.55
SHISA5-216ENST00000494854 ZNRF3Q9ULT6 936 aa18.5■□□□□ 0.55
SHISA5-216ENST00000494854 NSFL1CQ9UNZ2 370 aaKnown RBP18.5■□□□□ 0.55
SHISA5-216ENST00000494854 SYT1P21579 422 aa18.49■□□□□ 0.55
SHISA5-216ENST00000494854 PUM3Q15397 648 aaKnown RBP18.49■□□□□ 0.55
SHISA5-216ENST00000494854 PI16Q6UXB8 463 aa18.49■□□□□ 0.55
SHISA5-216ENST00000494854 NECAB1Q8N987 351 aa18.49■□□□□ 0.55
SHISA5-216ENST00000494854 LTBP1Q14766 1721 aa18.49■□□□□ 0.55
SHISA5-216ENST00000494854 STX6O43752 255 aa18.49■□□□□ 0.55
SHISA5-216ENST00000494854 LPIN2Q92539 896 aa18.49■□□□□ 0.55
SHISA5-216ENST00000494854 CDC5LQ99459 802 aaKnown RBP18.49■□□□□ 0.55
SHISA5-216ENST00000494854 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
SHISA5-216ENST00000494854 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
SHISA5-216ENST00000494854 HACL1Q9UJ83 578 aa18.49■□□□□ 0.55
SHISA5-216ENST00000494854 ISY1Q9ULR0 285 aaKnown RBP18.49■□□□□ 0.55
SHISA5-216ENST00000494854 ZSCAN22P10073 491 aaPredicted RBP18.48■□□□□ 0.55
SHISA5-216ENST00000494854 FGFR2P21802 821 aa18.48■□□□□ 0.55
SHISA5-216ENST00000494854 GPSM2P81274 684 aa18.48■□□□□ 0.55
SHISA5-216ENST00000494854 WASHC4Q2M389 1173 aa18.48■□□□□ 0.55
SHISA5-216ENST00000494854 ANKRD18AQ8IVF6 992 aa18.48■□□□□ 0.55
SHISA5-216ENST00000494854 CCDC102BQ68D86 513 aa18.47■□□□□ 0.55
SHISA5-216ENST00000494854 STOX1Q6ZVD7 989 aa18.47■□□□□ 0.55
SHISA5-216ENST00000494854 HELBQ8NG08 1087 aaPredicted RBP18.47■□□□□ 0.55
SHISA5-216ENST00000494854 APPBP2Q92624 585 aa18.47■□□□□ 0.55
SHISA5-216ENST00000494854 POLLQ9UGP5 575 aa18.47■□□□□ 0.55
SHISA5-216ENST00000494854 CEP350Q5VT06 3117 aa18.47■□□□□ 0.55
SHISA5-216ENST00000494854 HMGB1P09429 215 aaKnown RBP18.47■□□□□ 0.55
SHISA5-216ENST00000494854 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
SHISA5-216ENST00000494854 ARID4AP29374 1257 aaPredicted RBP18.47■□□□□ 0.55
SHISA5-216ENST00000494854 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
SHISA5-216ENST00000494854 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHISA5-216ENST00000494854 NCLP19338 710 aaKnown RBP18.46■□□□□ 0.55
SHISA5-216ENST00000494854 IGHMBP2P38935 993 aaKnown RBP18.46■□□□□ 0.55
SHISA5-216ENST00000494854 PHKA1P46020 1223 aa18.46■□□□□ 0.55
SHISA5-216ENST00000494854 Q6ZUG5 572 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms