RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 HIBADHP31937 336 aaKnown RBP21.9■■□□□ 1.1
TSPAN4-212ENST00000494815 IQSEC3Q9UPP2 1182 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-212ENST00000494815 HOXA10P31260 410 aaPredicted RBP21.89■■□□□ 1.1
TSPAN4-212ENST00000494815 POTEAQ6S8J7 498 aa21.89■■□□□ 1.1
TSPAN4-212ENST00000494815 CCDC83Q8IWF9 413 aa21.89■■□□□ 1.1
TSPAN4-212ENST00000494815 LMBRD1Q9NUN5 540 aa21.89■■□□□ 1.1
TSPAN4-212ENST00000494815 SMC3Q9UQE7 1217 aa21.89■■□□□ 1.1
TSPAN4-212ENST00000494815 XDHP47989 1333 aa21.89■■□□□ 1.1
TSPAN4-212ENST00000494815 A0A0G2JLW4 131 aa21.89■■□□□ 1.09
TSPAN4-212ENST00000494815 KLRK1P26718 216 aa21.89■■□□□ 1.09
TSPAN4-212ENST00000494815 EXOSC10Q01780 885 aaKnown RBP21.89■■□□□ 1.09
TSPAN4-212ENST00000494815 ALX1Q15699 326 aa21.89■■□□□ 1.09
TSPAN4-212ENST00000494815 PNPLA7Q6ZV29 1317 aa21.89■■□□□ 1.09
TSPAN4-212ENST00000494815 IRS2Q9Y4H2 1338 aa21.89■■□□□ 1.09
TSPAN4-212ENST00000494815 ZNF213O14771 459 aa21.88■■□□□ 1.09
TSPAN4-212ENST00000494815 Q6ZUG5 572 aa21.88■■□□□ 1.09
TSPAN4-212ENST00000494815 AGXT2Q9BYV1 514 aa21.88■■□□□ 1.09
TSPAN4-212ENST00000494815 ANKIB1Q9P2G1 1089 aa21.88■■□□□ 1.09
TSPAN4-212ENST00000494815 MBD4O95243 580 aa21.88■■□□□ 1.09
TSPAN4-212ENST00000494815 GNAT2P19087 354 aa21.88■■□□□ 1.09
TSPAN4-212ENST00000494815 ZSCAN23Q3MJ62 389 aa21.88■■□□□ 1.09
TSPAN4-212ENST00000494815 BBOX1O75936 387 aa21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 ST3GAL1Q11201 340 aa21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 FBXL16Q8N461 479 aa21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 CRAMP1Q96RY5 1269 aa21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 ABCF2Q9UG63 623 aa21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 WDR33Q9C0J8 1336 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 LAMA4Q16363 1823 aa21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 PATL2C9JE40 543 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 MSNP26038 577 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 HS1BP3Q53T59 392 aa21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 CAVIN1Q6NZI2 390 aaKnown RBP21.87■■□□□ 1.09
TSPAN4-212ENST00000494815 OFD1O75665 1012 aa21.86■■□□□ 1.09
TSPAN4-212ENST00000494815 APPP05067 770 aa21.86■■□□□ 1.09
TSPAN4-212ENST00000494815 HAND2P61296 217 aa21.86■■□□□ 1.09
TSPAN4-212ENST00000494815 FGD1P98174 961 aa21.86■■□□□ 1.09
TSPAN4-212ENST00000494815 TMED8Q6PL24 325 aaPredicted RBP21.86■■□□□ 1.09
TSPAN4-212ENST00000494815 C15orf52Q6ZUT6 534 aaKnown RBP21.86■■□□□ 1.09
TSPAN4-212ENST00000494815 RAI14Q9P0K7 980 aa21.86■■□□□ 1.09
TSPAN4-212ENST00000494815 NRXN2Q9P2S2 1712 aa21.85■■□□□ 1.09
TSPAN4-212ENST00000494815 TMC4Q7Z404 712 aa21.85■■□□□ 1.09
TSPAN4-212ENST00000494815 BRIP1Q9BX63 1249 aa21.85■■□□□ 1.09
TSPAN4-212ENST00000494815 CYP7A1P22680 504 aa21.85■■□□□ 1.09
TSPAN4-212ENST00000494815 NECAB1Q8N987 351 aa21.85■■□□□ 1.09
TSPAN4-212ENST00000494815 IGSF3O75054 1194 aa21.84■■□□□ 1.09
TSPAN4-212ENST00000494815 PDIA4P13667 645 aaKnown RBP21.84■■□□□ 1.09
TSPAN4-212ENST00000494815 NCOA7Q8NI08 942 aa21.84■■□□□ 1.09
TSPAN4-212ENST00000494815 BRF1Q92994 677 aa21.84■■□□□ 1.09
TSPAN4-212ENST00000494815 ARMT1Q9H993 441 aa21.84■■□□□ 1.09
TSPAN4-212ENST00000494815 WDR19Q8NEZ3 1342 aa21.84■■□□□ 1.09
TSPAN4-212ENST00000494815 NCLP19338 710 aaKnown RBP21.84■■□□□ 1.09
TSPAN4-212ENST00000494815 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.84■■□□□ 1.09
TSPAN4-212ENST00000494815 GJB2P29033 226 aa21.83■■□□□ 1.09
TSPAN4-212ENST00000494815 TXNRD3Q86VQ6 643 aa21.83■■□□□ 1.09
TSPAN4-212ENST00000494815 GTF3C6Q969F1 213 aa21.83■■□□□ 1.09
TSPAN4-212ENST00000494815 NACAP1Q9BZK3 213 aa21.83■■□□□ 1.09
TSPAN4-212ENST00000494815 MCM5P33992 734 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 CACNA1SQ13698 1873 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 RALYLQ86SE5 291 aaKnown RBP21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 MB21D2Q8IYB1 491 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 IFNL3Q8IZI9 196 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 LCORLQ8N3X6 602 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 NAPBQ9H115 298 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 EPB41L4AQ9HCS5 686 aaPredicted RBP21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 MYH13Q9UKX3 1938 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 GSG1L2A8MUP6 293 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 ATP2B4P23634 1241 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 PDLIM2Q96JY6 352 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 LRRC2Q9BYS8 371 aa21.82■■□□□ 1.08
TSPAN4-212ENST00000494815 STX6O43752 255 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 SYT1P21579 422 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 TERF1P54274 439 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 GPSM2P81274 684 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 TRDNQ13061 729 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 ZNF804AQ7Z570 1209 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 NBPF3Q9H094 633 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 NAA16Q6N069 864 aaPredicted RBP21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 RBSNQ9H1K0 784 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 PARP3Q9Y6F1 533 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 SLC4A4Q9Y6R1 1079 aa21.81■■□□□ 1.08
TSPAN4-212ENST00000494815 SALL1Q9NSC2 1324 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 MAGEB6P1A0A0J9YX57 407 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 PFKFB2O60825 505 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 MMP10P09238 476 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 EVCP57679 992 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 ADGRA1Q86SQ6 560 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 MIGA1Q8NAN2 632 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 GGA1Q9UJY5 639 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 NSFL1CQ9UNZ2 370 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 ANKRD31Q8N7Z5 1873 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 TBC1D10CQ8IV04 446 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 TDRD7Q8NHU6 1098 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 NSUN4Q96CB9 384 aaKnown RBP21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 CHMP4CQ96CF2 233 aa21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 ZNF274Q96GC6 653 aaPredicted RBP21.8■■□□□ 1.08
TSPAN4-212ENST00000494815 PDCP20941 246 aa21.79■■□□□ 1.08
TSPAN4-212ENST00000494815 STK3Q13188 491 aa21.79■■□□□ 1.08
TSPAN4-212ENST00000494815 SPTY2D1Q68D10 685 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-212ENST00000494815 GPT2Q8TD30 523 aa21.79■■□□□ 1.08
TSPAN4-212ENST00000494815 CAMKK2Q96RR4 588 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms