RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ANKRD13AQ8IZ07 590 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 ERO1AQ96HE7 468 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 TEPSINQ96N21 525 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 ARHGAP39Q9C0H5 1083 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 PPP2R3BQ9Y5P8 575 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 PTCH2Q9Y6C5 1203 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 FANCIQ9NVI1 1328 aa14.84□□□□□ -0.03
CSNK1E-212ENST00000494610 RBBP6Q7Z6E9 1792 aaKnown RBP14.83□□□□□ -0.03
CSNK1E-212ENST00000494610 TESPA1A2RU30 521 aaPredicted RBP14.83□□□□□ -0.04
CSNK1E-212ENST00000494610 VAMP4O75379 141 aa14.83□□□□□ -0.04
CSNK1E-212ENST00000494610 CT47B1P0C2W7 299 aaPredicted RBP14.83□□□□□ -0.04
CSNK1E-212ENST00000494610 EXOSC9Q06265 439 aaKnown RBP14.83□□□□□ -0.04
CSNK1E-212ENST00000494610 FAM43AQ8N2R8 423 aa14.83□□□□□ -0.04
CSNK1E-212ENST00000494610 ARMC5Q96C12 935 aa14.83□□□□□ -0.04
CSNK1E-212ENST00000494610 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
CSNK1E-212ENST00000494610 TTF2Q9UNY4 1162 aaKnown RBP14.83□□□□□ -0.04
CSNK1E-212ENST00000494610 TRIOBPQ9H2D6 2365 aa14.82□□□□□ -0.04
CSNK1E-212ENST00000494610 VGLL4Q14135 290 aa14.82□□□□□ -0.04
CSNK1E-212ENST00000494610 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
CSNK1E-212ENST00000494610 MFSD14BQ5SR56 506 aa14.82□□□□□ -0.04
CSNK1E-212ENST00000494610 INTS3Q68E01 1043 aaKnown RBP14.82□□□□□ -0.04
CSNK1E-212ENST00000494610 LDHAL6AQ6ZMR3 332 aa14.82□□□□□ -0.04
CSNK1E-212ENST00000494610 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
CSNK1E-212ENST00000494610 CNNM1Q9NRU3 951 aa14.82□□□□□ -0.04
CSNK1E-212ENST00000494610 CCL15-CCL14A0A0B4J2E2 113 aa14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 FXR1P51114 621 aaKnown RBP eCLIP14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 CCL15Q16663 113 aa14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 DZIP1LQ8IYY4 767 aaKnown RBP14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 TDRD7Q8NHU6 1098 aaKnown RBP14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 SH3TC2Q8TF17 1288 aa14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 OTUD5Q96G74 571 aa14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 ZNF333Q96JL9 665 aa14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 FAM84BQ96KN1 310 aaPredicted RBP14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 COLQQ9Y215 455 aaPredicted RBP14.81□□□□□ -0.04
CSNK1E-212ENST00000494610 CRKP46108 304 aa14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 FKBP1AP62942 108 aaKnown RBP14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 TAF1CQ15572 869 aaPredicted RBP14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 CCDC57Q2TAC2 916 aa14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 TAF7LQ5H9L4 462 aa14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 GCC1Q96CN9 775 aa14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 KAZALD1Q96I82 304 aa14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 FAM205AQ6ZU69 1335 aa14.8□□□□□ -0.04
CSNK1E-212ENST00000494610 CHAF1AQ13111 956 aaPredicted RBP14.79□□□□□ -0.04
CSNK1E-212ENST00000494610 OTUD7BQ6GQQ9 843 aa14.79□□□□□ -0.04
CSNK1E-212ENST00000494610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSNK1E-212ENST00000494610 ZKSCAN4Q969J2 545 aaPredicted RBP14.79□□□□□ -0.04
CSNK1E-212ENST00000494610 CDCA7LQ96GN5 454 aa14.79□□□□□ -0.04
CSNK1E-212ENST00000494610 SUCLG2Q96I99 432 aa14.79□□□□□ -0.04
CSNK1E-212ENST00000494610 ARAP2Q8WZ64 1704 aa14.78□□□□□ -0.04
CSNK1E-212ENST00000494610 GRM8O00222 908 aa14.78□□□□□ -0.04
CSNK1E-212ENST00000494610 CTGFP29279 349 aa14.78□□□□□ -0.04
CSNK1E-212ENST00000494610 HIBADHP31937 336 aaKnown RBP14.78□□□□□ -0.04
CSNK1E-212ENST00000494610 MAP3K9P80192 1104 aa14.78□□□□□ -0.04
CSNK1E-212ENST00000494610 SLC9C1Q4G0N8 1177 aa14.78□□□□□ -0.04
CSNK1E-212ENST00000494610 SERPINA10Q9UK55 444 aa14.78□□□□□ -0.04
CSNK1E-212ENST00000494610 UNCXA6NJT0 531 aa14.77□□□□□ -0.05
CSNK1E-212ENST00000494610 SLC4A8Q2Y0W8 1093 aa14.77□□□□□ -0.05
CSNK1E-212ENST00000494610 LRRC24Q50LG9 513 aa14.77□□□□□ -0.05
CSNK1E-212ENST00000494610 SLC4A10Q6U841 1118 aa14.77□□□□□ -0.05
CSNK1E-212ENST00000494610 TMEM106CQ9BVX2 250 aa14.77□□□□□ -0.05
CSNK1E-212ENST00000494610 SNCAIPQ9Y6H5 919 aa14.77□□□□□ -0.05
CSNK1E-212ENST00000494610 A0A0C4DFX4 3053 aa14.77□□□□□ -0.05
CSNK1E-212ENST00000494610 CACNA1FO60840 1977 aa14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 BTBD19C9JJ37 291 aa14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 H0YGN5 161 aa14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 NBPF7P0C2Y1 421 aaPredicted RBP14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 KLHDC4Q8TBB5 520 aa14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 ZFYVE28Q9HCC9 887 aa14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 C9orf78Q9NZ63 289 aaPredicted RBP14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 LAMA3Q16787 3333 aa14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 COL6A3P12111 3177 aa14.76□□□□□ -0.05
CSNK1E-212ENST00000494610 IRF6O14896 467 aa14.75□□□□□ -0.05
CSNK1E-212ENST00000494610 GTF2A2P52657 109 aa14.75□□□□□ -0.05
CSNK1E-212ENST00000494610 TNFAIP1Q13829 316 aa14.75□□□□□ -0.05
CSNK1E-212ENST00000494610 UBE4AQ14139 1066 aa14.75□□□□□ -0.05
CSNK1E-212ENST00000494610 MTFR1Q15390 333 aa14.75□□□□□ -0.05
CSNK1E-212ENST00000494610 MIGA2Q7L4E1 593 aa14.75□□□□□ -0.05
CSNK1E-212ENST00000494610 RIPOR2Q9Y4F9 1068 aa14.75□□□□□ -0.05
CSNK1E-212ENST00000494610 SPDYE5A6NIY4 337 aa14.74□□□□□ -0.05
CSNK1E-212ENST00000494610 BCAMP50895 628 aa14.74□□□□□ -0.05
CSNK1E-212ENST00000494610 FBXO33Q7Z6M2 555 aa14.74□□□□□ -0.05
CSNK1E-212ENST00000494610 WRNIP1Q96S55 665 aa14.74□□□□□ -0.05
CSNK1E-212ENST00000494610 CPA4Q9UI42 421 aa14.74□□□□□ -0.05
CSNK1E-212ENST00000494610 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
CSNK1E-212ENST00000494610 CSADQ9Y600 493 aa14.74□□□□□ -0.05
CSNK1E-212ENST00000494610 INPP5BP32019 993 aa14.73□□□□□ -0.05
CSNK1E-212ENST00000494610 LACTBP83111 547 aaPredicted RBP14.73□□□□□ -0.05
CSNK1E-212ENST00000494610 SHISA4Q96DD7 197 aa14.73□□□□□ -0.05
CSNK1E-212ENST00000494610 BICC1Q9H694 974 aaKnown RBP14.73□□□□□ -0.05
CSNK1E-212ENST00000494610 TLR2O60603 784 aa14.72□□□□□ -0.05
CSNK1E-212ENST00000494610 TNNI2P48788 182 aa14.72□□□□□ -0.05
CSNK1E-212ENST00000494610 APOBEC3HQ6NTF7 200 aaKnown RBP14.72□□□□□ -0.05
CSNK1E-212ENST00000494610 ANKRD44Q8N8A2 993 aa14.72□□□□□ -0.05
CSNK1E-212ENST00000494610 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.72□□□□□ -0.05
CSNK1E-212ENST00000494610 FRAT2O75474 233 aaPredicted RBP14.71□□□□□ -0.05
CSNK1E-212ENST00000494610 NEFLP07196 543 aa14.71□□□□□ -0.05
CSNK1E-212ENST00000494610 CHRDL2Q6WN34 429 aa14.71□□□□□ -0.05
CSNK1E-212ENST00000494610 NBPF11Q86T75 865 aa14.71□□□□□ -0.05
CSNK1E-212ENST00000494610 VPS37DQ86XT2 251 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms