RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ST5P78524 1137 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 ABCF2Q9UG63 623 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 GSG1L2A8MUP6 293 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 ZBTB22O15209 634 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 HIBADHP31937 336 aaKnown RBP19.56■□□□□ 0.72
ATG4B-225ENST00000494465 ANTXR2P58335 489 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 FGD1P98174 961 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 SCRN1Q12765 414 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 ZNF384Q8TF68 577 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 ANKRD31Q8N7Z5 1873 aa19.56■□□□□ 0.72
ATG4B-225ENST00000494465 NRXN2Q9P2S2 1712 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 EVCP57679 992 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 KLHL40Q2TBA0 621 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 IFNL3Q8IZI9 196 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 NCOA7Q8NI08 942 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 NKX2-3Q8TAU0 364 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 PRKAB2O43741 272 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 PRPF40AO75400 957 aaKnown RBP19.55■□□□□ 0.72
ATG4B-225ENST00000494465 F13A1P00488 732 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 GPHNQ9NQX3 736 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-225ENST00000494465 TIAM2Q8IVF5 1701 aa19.55■□□□□ 0.72
ATG4B-225ENST00000494465 CYP7A1P22680 504 aa19.54■□□□□ 0.72
ATG4B-225ENST00000494465 COL23A1Q86Y22 540 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-225ENST00000494465 MIGA1Q8NAN2 632 aa19.54■□□□□ 0.72
ATG4B-225ENST00000494465 RPGRQ92834 1020 aaKnown RBP19.54■□□□□ 0.72
ATG4B-225ENST00000494465 KLRG2A4D1S0 409 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-225ENST00000494465 MCM5P33992 734 aa19.54■□□□□ 0.72
ATG4B-225ENST00000494465 RAI14Q9P0K7 980 aa19.54■□□□□ 0.72
ATG4B-225ENST00000494465 RGS17Q9UGC6 210 aaPredicted RBP19.54■□□□□ 0.72
ATG4B-225ENST00000494465 DDX49Q9Y6V7 483 aaKnown RBP19.54■□□□□ 0.72
ATG4B-225ENST00000494465 WDR19Q8NEZ3 1342 aa19.53■□□□□ 0.72
ATG4B-225ENST00000494465 RGPD3A6NKT7 1758 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-225ENST00000494465 RGPD4Q7Z3J3 1758 aa19.53■□□□□ 0.72
ATG4B-225ENST00000494465 PRC1O43663 620 aa19.53■□□□□ 0.72
ATG4B-225ENST00000494465 JAK2O60674 1132 aa19.53■□□□□ 0.72
ATG4B-225ENST00000494465 GNAT2P19087 354 aa19.53■□□□□ 0.72
ATG4B-225ENST00000494465 ZNF274Q96GC6 653 aaPredicted RBP19.53■□□□□ 0.72
ATG4B-225ENST00000494465 LEMD3Q9Y2U8 911 aa19.53■□□□□ 0.72
ATG4B-225ENST00000494465 PDIA3P30101 505 aaKnown RBP19.52■□□□□ 0.72
ATG4B-225ENST00000494465 ANKIB1Q9P2G1 1089 aa19.52■□□□□ 0.72
ATG4B-225ENST00000494465 XDHP47989 1333 aa19.52■□□□□ 0.72
ATG4B-225ENST00000494465 MAST2Q6P0Q8 1798 aa19.52■□□□□ 0.72
ATG4B-225ENST00000494465 HOXA10P31260 410 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-225ENST00000494465 FOXD4L6Q3SYB3 417 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-225ENST00000494465 LARP1BQ659C4 914 aaKnown RBP19.52■□□□□ 0.72
ATG4B-225ENST00000494465 FOXD4L3Q6VB84 417 aaPredicted RBP19.52■□□□□ 0.72
ATG4B-225ENST00000494465 SMARCC2Q8TAQ2 1214 aa19.52■□□□□ 0.72
ATG4B-225ENST00000494465 RIOK1Q9BRS2 568 aaKnown RBP19.52■□□□□ 0.72
ATG4B-225ENST00000494465 NAPBQ9H115 298 aa19.52■□□□□ 0.72
ATG4B-225ENST00000494465 SLC4A4Q9Y6R1 1079 aa19.52■□□□□ 0.72
ATG4B-225ENST00000494465 CCDC88AQ3V6T2 1871 aa19.52■□□□□ 0.71
ATG4B-225ENST00000494465 CTDNEP1O95476 244 aa19.51■□□□□ 0.71
ATG4B-225ENST00000494465 RALYLQ86SE5 291 aaKnown RBP19.51■□□□□ 0.71
ATG4B-225ENST00000494465 GPT2Q8TD30 523 aa19.51■□□□□ 0.71
ATG4B-225ENST00000494465 TACC3Q9Y6A5 838 aa19.51■□□□□ 0.71
ATG4B-225ENST00000494465 NSUN7Q8NE18 718 aaKnown RBP19.51■□□□□ 0.71
ATG4B-225ENST00000494465 RBM17Q96I25 401 aaKnown RBP19.51■□□□□ 0.71
ATG4B-225ENST00000494465 LLPHQ9BRT6 129 aaKnown RBP19.51■□□□□ 0.71
ATG4B-225ENST00000494465 LRRC37AA6NMS7 1700 aa19.51■□□□□ 0.71
ATG4B-225ENST00000494465 PDIA4P13667 645 aaKnown RBP19.5■□□□□ 0.71
ATG4B-225ENST00000494465 PDCP20941 246 aa19.5■□□□□ 0.71
ATG4B-225ENST00000494465 GPSM2P81274 684 aa19.5■□□□□ 0.71
ATG4B-225ENST00000494465 CYB5R4Q7L1T6 521 aa19.5■□□□□ 0.71
ATG4B-225ENST00000494465 NSUN4Q96CB9 384 aaKnown RBP19.5■□□□□ 0.71
ATG4B-225ENST00000494465 NEDD4P46934 1319 aa19.5■□□□□ 0.71
ATG4B-225ENST00000494465 LTBP1Q14766 1721 aa19.5■□□□□ 0.71
ATG4B-225ENST00000494465 C15orf52Q6ZUT6 534 aaKnown RBP19.5■□□□□ 0.71
ATG4B-225ENST00000494465 CDC37L1Q7L3B6 337 aa19.5■□□□□ 0.71
ATG4B-225ENST00000494465 BRPF3Q9ULD4 1205 aa19.5■□□□□ 0.71
ATG4B-225ENST00000494465 KIAA1551Q9HCM1 1747 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 MAGEB6P1A0A0J9YX57 407 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 VPS37CA5D8V6 355 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-225ENST00000494465 CCT2P78371 535 aaKnown RBP19.49■□□□□ 0.71
ATG4B-225ENST00000494465 NAA16Q6N069 864 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-225ENST00000494465 NCOA5Q9HCD5 579 aaKnown RBP19.49■□□□□ 0.71
ATG4B-225ENST00000494465 INCENPQ9NQS7 918 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 FSD2A1L4K1 749 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 MECOMQ03112 1051 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 TRDNQ13061 729 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 NLGN1Q8N2Q7 840 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 GDPD2Q9HCC8 539 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 SALL1Q9NSC2 1324 aa19.49■□□□□ 0.71
ATG4B-225ENST00000494465 B4E1Z4 1266 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 BBOX1O75936 387 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 CTDSPL2Q05D32 466 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 TMEM87AQ8NBN3 555 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 CRAMP1Q96RY5 1269 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 NACAP1Q9BZK3 213 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 BAZ2AQ9UIF9 1905 aaKnown RBP19.48■□□□□ 0.71
ATG4B-225ENST00000494465 PRDX5P30044 214 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 DYNLL1P63167 89 aaKnown RBP19.48■□□□□ 0.71
ATG4B-225ENST00000494465 CHAF1AQ13111 956 aaPredicted RBP19.48■□□□□ 0.71
ATG4B-225ENST00000494465 POTEAQ6S8J7 498 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
ATG4B-225ENST00000494465 SDR42E1Q8WUS8 393 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 GPR101Q96P66 508 aaPredicted RBP19.48■□□□□ 0.71
ATG4B-225ENST00000494465 NSFL1CQ9UNZ2 370 aaKnown RBP19.48■□□□□ 0.71
ATG4B-225ENST00000494465 HPS5Q9UPZ3 1129 aa19.48■□□□□ 0.71
ATG4B-225ENST00000494465 TDO2P48775 406 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms