RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
TRA2B-216ENST00000493864 LTV1Q96GA3 475 aaPredicted RBP8.69□□□□□ -1.02
TRA2B-216ENST00000493864 HSH2DQ96JZ2 352 aa8.69□□□□□ -1.02
TRA2B-216ENST00000493864 YTHDC1Q96MU7 727 aaKnown RBP8.69□□□□□ -1.02
TRA2B-216ENST00000493864 CRISPLD1Q9H336 500 aa8.69□□□□□ -1.02
TRA2B-216ENST00000493864 ANO2Q9NQ90 1003 aa8.69□□□□□ -1.02
TRA2B-216ENST00000493864 DNMT3AQ9Y6K1 912 aaPredicted RBP8.69□□□□□ -1.02
TRA2B-216ENST00000493864 IVNS1ABPQ9Y6Y0 642 aa8.69□□□□□ -1.02
TRA2B-216ENST00000493864 SMG6Q86US8 1419 aaKnown RBP8.69□□□□□ -1.02
TRA2B-216ENST00000493864 COL3A1P02461 1466 aaPredicted RBP8.69□□□□□ -1.02
TRA2B-216ENST00000493864 PEAK1Q9H792 1746 aa8.68□□□□□ -1.02
TRA2B-216ENST00000493864 FAM83GA6ND36 823 aa8.68□□□□□ -1.02
TRA2B-216ENST00000493864 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
TRA2B-216ENST00000493864 U2AF1L5P0DN76 240 aaPredicted RBP8.68□□□□□ -1.02
TRA2B-216ENST00000493864 VEGFBP49765 207 aa8.68□□□□□ -1.02
TRA2B-216ENST00000493864 U2AF1Q01081 240 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRA2B-216ENST00000493864 C11orf91Q3C1V1 193 aa8.68□□□□□ -1.02
TRA2B-216ENST00000493864 EFHC2Q5JST6 749 aa8.68□□□□□ -1.02
TRA2B-216ENST00000493864 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
TRA2B-216ENST00000493864 NUDCQ9Y266 331 aa8.68□□□□□ -1.02
TRA2B-216ENST00000493864 GPC6Q9Y625 555 aaPredicted RBP8.68□□□□□ -1.02
TRA2B-216ENST00000493864 KIAA0232Q92628 1395 aa8.68□□□□□ -1.02
TRA2B-216ENST00000493864 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.68□□□□□ -1.02
TRA2B-216ENST00000493864 CDC14CA4D256 554 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 H7C1W4 665 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 FLT4P35916 1363 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 DBN1Q16643 649 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 KIF24Q5T7B8 1368 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 BRWD3Q6RI45 1802 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 TRIM22Q8IYM9 498 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 ZNF280CQ8ND82 737 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 HELQQ8TDG4 1101 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 SUSD3Q96L08 255 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 PRDM11Q9NQV5 511 aa8.67□□□□□ -1.02
TRA2B-216ENST00000493864 CDK12Q9NYV4 1490 aaPredicted RBP8.67□□□□□ -1.02
TRA2B-216ENST00000493864 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
TRA2B-216ENST00000493864 GNEQ9Y223 722 aaKnown RBP8.67□□□□□ -1.02
TRA2B-216ENST00000493864 CPDO75976 1380 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 HMOX1P09601 288 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 HIF1AQ16665 826 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 CCDC146Q8IYE0 955 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 ANKRD24Q8TF21 1146 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 IFT43Q96FT9 208 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 ANKIB1Q9P2G1 1089 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 LTN1O94822 1766 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 NRAPQ86VF7 1730 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 NWD2Q9ULI1 1742 aa8.66□□□□□ -1.02
TRA2B-216ENST00000493864 RTL1A6NKG5 1358 aa8.65□□□□□ -1.02
TRA2B-216ENST00000493864 TNFRSF10BO14763 440 aa8.65□□□□□ -1.02
TRA2B-216ENST00000493864 THBS1P07996 1170 aa8.65□□□□□ -1.02
TRA2B-216ENST00000493864 ZNF772Q68DY9 489 aaPredicted RBP8.65□□□□□ -1.02
TRA2B-216ENST00000493864 NLRP8Q86W28 1048 aa8.65□□□□□ -1.02
TRA2B-216ENST00000493864 ZNF837Q96EG3 531 aaPredicted RBP8.65□□□□□ -1.02
TRA2B-216ENST00000493864 STIM2Q9P246 746 aa8.65□□□□□ -1.02
TRA2B-216ENST00000493864 BCS1LQ9Y276 419 aa8.65□□□□□ -1.02
TRA2B-216ENST00000493864 EP400Q96L91 3159 aa8.65□□□□□ -1.02
TRA2B-216ENST00000493864 RGPD5Q99666 1765 aa8.65□□□□□ -1.02
TRA2B-216ENST00000493864 COL18A1P39060 1754 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 H3BRB1 525 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 BRD2P25440 801 aaKnown RBP8.64□□□□□ -1.03
TRA2B-216ENST00000493864 LBRQ14739 615 aaKnown RBP8.64□□□□□ -1.03
TRA2B-216ENST00000493864 NBPF6Q5VWK0 638 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 SULT6B1Q6IMI4 303 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 VWA5B2Q8N398 1253 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 USHBP1Q8N6Y0 703 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 GTPBP3Q969Y2 492 aaKnown RBP8.64□□□□□ -1.03
TRA2B-216ENST00000493864 NBPF4Q96M43 638 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 TUT1Q9H6E5 874 aaKnown RBP8.64□□□□□ -1.03
TRA2B-216ENST00000493864 EGFL7Q9UHF1 273 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 BCL9LQ86UU0 1499 aa8.64□□□□□ -1.03
TRA2B-216ENST00000493864 COL14A1Q05707 1796 aaKnown RBP8.63□□□□□ -1.03
TRA2B-216ENST00000493864 TGFBR3LH3BV60 316 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 HNRNPUQ00839 825 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRA2B-216ENST00000493864 FKBP4Q02790 459 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRA2B-216ENST00000493864 SF3B2Q13435 895 aaKnown RBP8.63□□□□□ -1.03
TRA2B-216ENST00000493864 FAM26DQ5JW98 314 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 GLYCTKQ8IVS8 523 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 RUNDC1Q96C34 613 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 PHACTR3Q96KR7 559 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 PLEKHF1Q96S99 279 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 ZCCHC2Q9C0B9 1178 aaKnown RBP8.63□□□□□ -1.03
TRA2B-216ENST00000493864 NLRP2Q9NX02 1062 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 BTG4Q9NY30 223 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 USP21Q9UK80 565 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 GLI3P10071 1580 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 RGS12O14924 1447 aa8.63□□□□□ -1.03
TRA2B-216ENST00000493864 BLMP54132 1417 aaPredicted RBP8.63□□□□□ -1.03
TRA2B-216ENST00000493864 CAMTA1Q9Y6Y1 1673 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 IGSF1Q8N6C5 1336 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 APAF1O14727 1248 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 ATXN7O15265 892 aaPredicted RBP8.62□□□□□ -1.03
TRA2B-216ENST00000493864 ICMTO60725 284 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 MPSTP25325 297 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 RXRBP28702 533 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 PRKAR2BP31323 418 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 EVA1CP58658 441 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 FIGNL1Q6PIW4 674 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 SV2AQ7L0J3 742 aa8.62□□□□□ -1.03
TRA2B-216ENST00000493864 TREML1Q86YW5 311 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms