RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PLCD1P51178 756 aa18.39■□□□□ 0.54
BRAT1-206ENST00000493232 CHST3Q7LGC8 479 aa18.39■□□□□ 0.54
BRAT1-206ENST00000493232 GOLGA1Q92805 767 aa18.39■□□□□ 0.54
BRAT1-206ENST00000493232 PSMD1Q99460 953 aa18.39■□□□□ 0.54
BRAT1-206ENST00000493232 RIMBP2O15034 1052 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 CNBD1Q8NA66 436 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 FBF1Q8TES7 1133 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 GLT8D2Q9H1C3 349 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 RNF216Q9NWF9 866 aaPredicted RBP18.39■□□□□ 0.53
BRAT1-206ENST00000493232 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 ELP1O95163 1332 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 MAST3O60307 1309 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 RILPL1Q5EBL4 403 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 TEX11Q8IYF3 940 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 ARID5AQ03989 594 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 RAB3GAP1Q15042 981 aa18.39■□□□□ 0.53
BRAT1-206ENST00000493232 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
BRAT1-206ENST00000493232 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 SH3TC1Q8TE82 1336 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 PUM3Q15397 648 aaKnown RBP18.38■□□□□ 0.53
BRAT1-206ENST00000493232 SV2BQ7L1I2 683 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 LUC7L2Q9Y383 392 aaKnown RBP18.38■□□□□ 0.53
BRAT1-206ENST00000493232 GNPATO15228 680 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 SLU7O95391 586 aaKnown RBP18.38■□□□□ 0.53
BRAT1-206ENST00000493232 CA8P35219 290 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 KIAA1524Q8TCG1 905 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 BACH1O14867 736 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 TUBBP07437 444 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 CNGA4Q8IV77 575 aa18.38■□□□□ 0.53
BRAT1-206ENST00000493232 METTL22Q9BUU2 404 aaPredicted RBP18.38■□□□□ 0.53
BRAT1-206ENST00000493232 C8orf34Q49A92 452 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 PKNOX2Q96KN3 472 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 AOX1Q06278 1338 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 RBM26Q5T8P6 1007 aaKnown RBP18.37■□□□□ 0.53
BRAT1-206ENST00000493232 CCDC50Q8IVM0 306 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 DEXIO95424 95 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 HSPA4P34932 840 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 GJC1P36383 396 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 PLCB3Q01970 1234 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 TSGA10Q9BZW7 698 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 TRAPPC8Q9Y2L5 1435 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 PHACTR3Q96KR7 559 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 ATP6V0A2Q9Y487 856 aa18.37■□□□□ 0.53
BRAT1-206ENST00000493232 FAM212AQ96EL1 285 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 PRDM10Q9NQV6 1147 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 CCDC129Q6ZRS4 1044 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 SBNO1A3KN83 1393 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 HIBADHP31937 336 aaKnown RBP18.36■□□□□ 0.53
BRAT1-206ENST00000493232 STX17P56962 302 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 OTUD6BQ8N6M0 293 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 ZKSCAN5Q9Y2L8 839 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 MRPS9P82933 396 aaKnown RBP18.36■□□□□ 0.53
BRAT1-206ENST00000493232 FRMD4BQ9Y2L6 1034 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 STK24Q9Y6E0 443 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 A0A1B0GUL7 405 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 TMEM110-MUSTN1A8MSY1 372 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 ATP2A2P16615 1042 aaKnown RBP18.36■□□□□ 0.53
BRAT1-206ENST00000493232 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 USP26Q9BXU7 913 aa18.36■□□□□ 0.53
BRAT1-206ENST00000493232 PDE8AO60658 829 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 MYL5Q02045 173 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 ZNF830Q96NB3 372 aaPredicted RBP18.35■□□□□ 0.53
BRAT1-206ENST00000493232 TESK2Q96S53 571 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 MTRF1LQ9UGC7 380 aaKnown RBP18.35■□□□□ 0.53
BRAT1-206ENST00000493232 ARHGEF12Q9NZN5 1544 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 ITGA6P23229 1130 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 TNNC1P63316 161 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 KRT24Q2M2I5 525 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 LLPHQ9BRT6 129 aaKnown RBP18.35■□□□□ 0.53
BRAT1-206ENST00000493232 MTUS1Q9ULD2 1270 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 UFL1O94874 794 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 IVLP07476 585 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 RPS6KB1P23443 525 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 TNNI3KQ59H18 835 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 ARHGEF10LQ9HCE6 1279 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 FPGT-TNNI3KV9GXZ4 949 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 PTPRKQ15262 1439 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 EPB41P11171 864 aaKnown RBP18.35■□□□□ 0.53
BRAT1-206ENST00000493232 RLBP1P12271 317 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 FAM160A1Q05DH4 1040 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 VWA3BQ502W6 1294 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 HS1BP3Q53T59 392 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 JAKMIP2Q96AA8 810 aa18.35■□□□□ 0.53
BRAT1-206ENST00000493232 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 SHANK2Q9UPX8 1470 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 KCNA6P17658 529 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 RAB3IL1Q8TBN0 382 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 PAIP2Q9BPZ3 127 aaKnown RBP18.34■□□□□ 0.53
BRAT1-206ENST00000493232 IFNKQ9P0W0 207 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.34■□□□□ 0.53
BRAT1-206ENST00000493232 BTG4Q9NY30 223 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 ZBTB21Q9ULJ3 1066 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 GUCA1BQ9UMX6 200 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 LETM2Q2VYF4 491 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 APPBP2Q92624 585 aa18.34■□□□□ 0.53
BRAT1-206ENST00000493232 DKC1O60832 514 aaKnown RBP eCLIP18.33■□□□□ 0.53
BRAT1-206ENST00000493232 CCDC14Q49A88 953 aa18.33■□□□□ 0.53
BRAT1-206ENST00000493232 VWA3AA6NCI4 1184 aa18.33■□□□□ 0.53
BRAT1-206ENST00000493232 ARL1P40616 181 aaPredicted RBP18.33■□□□□ 0.53
BRAT1-206ENST00000493232 TRIM14Q14142 442 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms