RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 POLR2AP24928 1970 aaKnown RBP14.3□□□□□ -0.12
LRTM1-202ENST00000493075 CLRN2A0PK11 232 aa14.3□□□□□ -0.12
LRTM1-202ENST00000493075 PPP1R12BO60237 982 aaPredicted RBP14.3□□□□□ -0.12
LRTM1-202ENST00000493075 CHAF1AQ13111 956 aaPredicted RBP14.3□□□□□ -0.12
LRTM1-202ENST00000493075 TNFAIP1Q13829 316 aa14.3□□□□□ -0.12
LRTM1-202ENST00000493075 ZKSCAN2Q63HK3 967 aa14.3□□□□□ -0.12
LRTM1-202ENST00000493075 WDR66Q8TBY9 1149 aa14.3□□□□□ -0.12
LRTM1-202ENST00000493075 SIL1Q9H173 461 aa14.3□□□□□ -0.12
LRTM1-202ENST00000493075 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
LRTM1-202ENST00000493075 RNF186Q9NXI6 227 aa14.3□□□□□ -0.12
LRTM1-202ENST00000493075 ZNF70Q9UC06 446 aaPredicted RBP14.3□□□□□ -0.12
LRTM1-202ENST00000493075 PAPPA2Q9BXP8 1791 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 GNAI2P04899 355 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 RASA3Q14644 834 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 GRIK5Q16478 980 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 ATP2B3Q16720 1220 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 VEZTQ9HBM0 779 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 PA2G4Q9UQ80 394 aaKnown RBP14.29□□□□□ -0.12
LRTM1-202ENST00000493075 AOX1Q06278 1338 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 A0A1B0GUL6 1792 aa14.29□□□□□ -0.12
LRTM1-202ENST00000493075 SRGAP3O43295 1099 aa14.28□□□□□ -0.12
LRTM1-202ENST00000493075 TM4SF4P48230 202 aa14.28□□□□□ -0.12
LRTM1-202ENST00000493075 HHIPL2Q6UWX4 724 aa14.28□□□□□ -0.12
LRTM1-202ENST00000493075 TEKT1Q969V4 418 aa14.28□□□□□ -0.12
LRTM1-202ENST00000493075 ZDHHC15Q96MV8 337 aa14.28□□□□□ -0.12
LRTM1-202ENST00000493075 TDRD3Q9H7E2 651 aaKnown RBP14.28□□□□□ -0.12
LRTM1-202ENST00000493075 ANGEL1Q9UNK9 670 aaKnown RBP14.28□□□□□ -0.12
LRTM1-202ENST00000493075 MAST3O60307 1309 aa14.28□□□□□ -0.12
LRTM1-202ENST00000493075 ZBED9Q6R2W3 1325 aa14.28□□□□□ -0.12
LRTM1-202ENST00000493075 SEMA3EO15041 775 aa14.27□□□□□ -0.12
LRTM1-202ENST00000493075 TNNI2P48788 182 aa14.27□□□□□ -0.12
LRTM1-202ENST00000493075 PRKG1Q13976 671 aa14.27□□□□□ -0.12
LRTM1-202ENST00000493075 NBPF12Q5TAG4 269 aaPredicted RBP14.27□□□□□ -0.12
LRTM1-202ENST00000493075 CLUAP1Q96AJ1 413 aa14.27□□□□□ -0.12
LRTM1-202ENST00000493075 TNNQ9UQP3 1299 aa14.27□□□□□ -0.12
LRTM1-202ENST00000493075 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.12
LRTM1-202ENST00000493075 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
LRTM1-202ENST00000493075 TRPA1O75762 1119 aa14.26□□□□□ -0.13
LRTM1-202ENST00000493075 FKBP1CQ5VVH2 108 aa14.26□□□□□ -0.13
LRTM1-202ENST00000493075 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
LRTM1-202ENST00000493075 SLC10A4Q96EP9 437 aa14.26□□□□□ -0.13
LRTM1-202ENST00000493075 DENND2AQ9ULE3 1009 aa14.26□□□□□ -0.13
LRTM1-202ENST00000493075 IREB2P48200 963 aaKnown RBP14.25□□□□□ -0.13
LRTM1-202ENST00000493075 INHBEP58166 350 aa14.25□□□□□ -0.13
LRTM1-202ENST00000493075 SREBF2Q12772 1141 aa14.25□□□□□ -0.13
LRTM1-202ENST00000493075 SPRYD7Q5W111 196 aa14.25□□□□□ -0.13
LRTM1-202ENST00000493075 APOBEC3HQ6NTF7 200 aaKnown RBP14.25□□□□□ -0.13
LRTM1-202ENST00000493075 TEPSINQ96N21 525 aa14.25□□□□□ -0.13
LRTM1-202ENST00000493075 SALL1Q9NSC2 1324 aa14.25□□□□□ -0.13
LRTM1-202ENST00000493075 TCP10L2B9ZVM9 353 aa14.24□□□□□ -0.13
LRTM1-202ENST00000493075 CAPN15O75808 1086 aa14.24□□□□□ -0.13
LRTM1-202ENST00000493075 ZBTB48P10074 688 aaPredicted RBP14.24□□□□□ -0.13
LRTM1-202ENST00000493075 CCDC102BQ68D86 513 aa14.24□□□□□ -0.13
LRTM1-202ENST00000493075 FAM83AQ86UY5 434 aa14.24□□□□□ -0.13
LRTM1-202ENST00000493075 SSC5DA1L4H1 1573 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 PHKA1P46020 1223 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 TIMM10P62072 90 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 TFCP2Q12800 502 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 PDS5AQ29RF7 1337 aaKnown RBP14.23□□□□□ -0.13
LRTM1-202ENST00000493075 NOM1Q5C9Z4 860 aaKnown RBP14.23□□□□□ -0.13
LRTM1-202ENST00000493075 ANKRD13AQ8IZ07 590 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 ZGPATQ8N5A5 531 aaKnown RBP14.23□□□□□ -0.13
LRTM1-202ENST00000493075 ABHD8Q96I13 439 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 CFHR5Q9BXR6 569 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 TMOD2Q9NZR1 351 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 FZD1Q9UP38 647 aa14.23□□□□□ -0.13
LRTM1-202ENST00000493075 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
LRTM1-202ENST00000493075 A0A1B0GUL7 405 aa14.22□□□□□ -0.13
LRTM1-202ENST00000493075 MANSC4A6NHS7 340 aaPredicted RBP14.22□□□□□ -0.13
LRTM1-202ENST00000493075 ZBTB7BO15156 539 aaPredicted RBP14.22□□□□□ -0.13
LRTM1-202ENST00000493075 LDHBP07195 334 aaKnown RBP14.22□□□□□ -0.13
LRTM1-202ENST00000493075 ADORA1P30542 326 aa14.22□□□□□ -0.13
LRTM1-202ENST00000493075 ATP8B2P98198 1209 aa14.22□□□□□ -0.13
LRTM1-202ENST00000493075 G3BP1Q13283 466 aaKnown RBP eCLIP14.22□□□□□ -0.13
LRTM1-202ENST00000493075 MVPQ14764 893 aaKnown RBP14.22□□□□□ -0.13
LRTM1-202ENST00000493075 FTSJ3Q8IY81 847 aaKnown RBP14.22□□□□□ -0.13
LRTM1-202ENST00000493075 HOOK2Q96ED9 719 aa14.22□□□□□ -0.13
LRTM1-202ENST00000493075 XAGE2Q96GT9 111 aa14.22□□□□□ -0.13
LRTM1-202ENST00000493075 TMEM39BQ9GZU3 492 aa14.22□□□□□ -0.13
LRTM1-202ENST00000493075 ALDH1A1P00352 501 aa14.21□□□□□ -0.13
LRTM1-202ENST00000493075 PRDX5P30044 214 aa14.21□□□□□ -0.13
LRTM1-202ENST00000493075 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
LRTM1-202ENST00000493075 POLA2Q14181 598 aa14.21□□□□□ -0.13
LRTM1-202ENST00000493075 SSH3Q8TE77 659 aa14.21□□□□□ -0.13
LRTM1-202ENST00000493075 WNK4Q96J92 1243 aa14.21□□□□□ -0.13
LRTM1-202ENST00000493075 CLMNQ96JQ2 1002 aa14.21□□□□□ -0.13
LRTM1-202ENST00000493075 MAP3K9P80192 1104 aa14.2□□□□□ -0.14
LRTM1-202ENST00000493075 SPTY2D1Q68D10 685 aaPredicted RBP14.2□□□□□ -0.14
LRTM1-202ENST00000493075 MCOLN1Q9GZU1 580 aa14.2□□□□□ -0.14
LRTM1-202ENST00000493075 DAGLAQ9Y4D2 1042 aa14.2□□□□□ -0.14
LRTM1-202ENST00000493075 MS4A1P11836 297 aa14.19□□□□□ -0.14
LRTM1-202ENST00000493075 CACNB3P54284 484 aa14.19□□□□□ -0.14
LRTM1-202ENST00000493075 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
LRTM1-202ENST00000493075 DGKZQ13574 1117 aa14.19□□□□□ -0.14
LRTM1-202ENST00000493075 RASGRF1Q13972 1273 aa14.19□□□□□ -0.14
LRTM1-202ENST00000493075 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.19□□□□□ -0.14
LRTM1-202ENST00000493075 CDAN1Q8IWY9 1227 aa14.19□□□□□ -0.14
LRTM1-202ENST00000493075 SLF2Q8IX21 1173 aa14.19□□□□□ -0.14
LRTM1-202ENST00000493075 FAM151AQ8WW52 585 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms