RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 PLIN1O60240 522 aa12.83□□□□□ -0.36
EPHB4-208ENST00000492403 RARSP54136 660 aaKnown RBP12.83□□□□□ -0.36
EPHB4-208ENST00000492403 MCCD1P59942 119 aaPredicted RBP12.83□□□□□ -0.36
EPHB4-208ENST00000492403 EML3Q32P44 896 aa12.83□□□□□ -0.36
EPHB4-208ENST00000492403 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
EPHB4-208ENST00000492403 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
EPHB4-208ENST00000492403 PCDHB9Q9Y5E1 797 aa12.83□□□□□ -0.36
EPHB4-208ENST00000492403 MAP3K15Q6ZN16 1313 aa12.83□□□□□ -0.36
EPHB4-208ENST00000492403 LTBP3Q9NS15 1303 aa12.83□□□□□ -0.36
EPHB4-208ENST00000492403 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 TCF3P15923 654 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 GPTP24298 496 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 KCNH2Q12809 1159 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 HLFQ16534 295 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 ZNF594Q96JF6 807 aaPredicted RBP12.82□□□□□ -0.36
EPHB4-208ENST00000492403 SLC4A5Q9BY07 1137 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
EPHB4-208ENST00000492403 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
EPHB4-208ENST00000492403 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 CTHP32929 405 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 SCNN1AP37088 669 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
EPHB4-208ENST00000492403 PTK2Q05397 1052 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 ALDH1L2Q3SY69 923 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 BLOC1S3Q6QNY0 202 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 TRIM50Q86XT4 487 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
EPHB4-208ENST00000492403 PHTF2Q8N3S3 785 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
EPHB4-208ENST00000492403 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 BABAM1Q9NWV8 329 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
EPHB4-208ENST00000492403 ARFGEF2Q9Y6D5 1785 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 MAP7D1Q3KQU3 841 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 HSP90AB3PQ58FF7 597 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 CC2D2BQ6DHV5 1058 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 NPAS4Q8IUM7 802 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 C1orf216Q8TAB5 229 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 GPSM3Q9Y4H4 160 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 SLX4Q8IY92 1834 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 FANCIQ9NVI1 1328 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
EPHB4-208ENST00000492403 DICER1Q9UPY3 1922 aaKnown RBP12.8□□□□□ -0.36
EPHB4-208ENST00000492403 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
EPHB4-208ENST00000492403 ATP1A2P50993 1020 aa12.79□□□□□ -0.36
EPHB4-208ENST00000492403 EIF6P56537 245 aaKnown RBP12.79□□□□□ -0.36
EPHB4-208ENST00000492403 AIMP1Q12904 312 aaKnown RBP12.79□□□□□ -0.36
EPHB4-208ENST00000492403 PTPRNQ16849 979 aa12.79□□□□□ -0.36
EPHB4-208ENST00000492403 TTLL7Q6ZT98 887 aa12.79□□□□□ -0.36
EPHB4-208ENST00000492403 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
EPHB4-208ENST00000492403 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
EPHB4-208ENST00000492403 KLRG1Q96E93 195 aa12.79□□□□□ -0.36
EPHB4-208ENST00000492403 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
EPHB4-208ENST00000492403 ZNF277Q9NRM2 450 aaPredicted RBP12.79□□□□□ -0.36
EPHB4-208ENST00000492403 DNAAF2Q9NVR5 837 aaKnown RBP12.79□□□□□ -0.36
EPHB4-208ENST00000492403 NUP98P52948 1817 aa12.78□□□□□ -0.36
EPHB4-208ENST00000492403 BCAR3O75815 825 aa12.78□□□□□ -0.36
EPHB4-208ENST00000492403 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
EPHB4-208ENST00000492403 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
EPHB4-208ENST00000492403 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
EPHB4-208ENST00000492403 SYNE4Q8N205 404 aa12.78□□□□□ -0.36
EPHB4-208ENST00000492403 UTP14AQ9BVJ6 771 aaKnown RBP12.78□□□□□ -0.36
EPHB4-208ENST00000492403 SMC4Q9NTJ3 1288 aa12.78□□□□□ -0.36
EPHB4-208ENST00000492403 ARHGAP33O14559 1287 aa12.77□□□□□ -0.37
EPHB4-208ENST00000492403 ABL1P00519 1130 aa12.77□□□□□ -0.37
EPHB4-208ENST00000492403 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.37
EPHB4-208ENST00000492403 JUNDP17535 347 aa12.77□□□□□ -0.37
EPHB4-208ENST00000492403 ANP32AP39687 249 aaKnown RBP12.77□□□□□ -0.37
EPHB4-208ENST00000492403 IARSP41252 1262 aaKnown RBP12.77□□□□□ -0.37
EPHB4-208ENST00000492403 PRELPP51888 382 aa12.77□□□□□ -0.37
EPHB4-208ENST00000492403 CLDN10P78369 228 aa12.77□□□□□ -0.37
EPHB4-208ENST00000492403 HTRA3P83110 453 aa12.77□□□□□ -0.37
EPHB4-208ENST00000492403 RWDD1Q9H446 243 aaPredicted RBP12.77□□□□□ -0.37
EPHB4-208ENST00000492403 NOD1Q9Y239 953 aa12.77□□□□□ -0.37
EPHB4-208ENST00000492403 KLRG2A4D1S0 409 aaPredicted RBP12.76□□□□□ -0.37
EPHB4-208ENST00000492403 PRMT3O60678 531 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 SUSD4Q5VX71 490 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 PDXDC2PQ6P474 469 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 BRICD5Q6PL45 260 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
EPHB4-208ENST00000492403 ARMC2Q8NEN0 867 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 PRR14Q9BWN1 585 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 SCUBE2Q9NQ36 999 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 EGFL7Q9UHF1 273 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 HACL1Q9UJ83 578 aa12.76□□□□□ -0.37
EPHB4-208ENST00000492403 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
EPHB4-208ENST00000492403 SNPHO15079 494 aa12.75□□□□□ -0.37
EPHB4-208ENST00000492403 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
EPHB4-208ENST00000492403 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
EPHB4-208ENST00000492403 PNMA8AQ86V59 439 aaPredicted RBP12.75□□□□□ -0.37
EPHB4-208ENST00000492403 LARGE2Q8N3Y3 721 aa12.75□□□□□ -0.37
EPHB4-208ENST00000492403 DNAJC5GQ8N7S2 189 aa12.75□□□□□ -0.37
EPHB4-208ENST00000492403 SUPT20HQ8NEM7 779 aa12.75□□□□□ -0.37
EPHB4-208ENST00000492403 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
EPHB4-208ENST00000492403 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms