RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 PODXL2Q9NZ53 605 aa11.94□□□□□ -0.5
NCKAP1-206ENST00000492058 ANGEL1Q9UNK9 670 aaKnown RBP11.94□□□□□ -0.5
NCKAP1-206ENST00000492058 ANKRD36CQ5JPF3 1778 aa11.94□□□□□ -0.5
NCKAP1-206ENST00000492058 PAPPA2Q9BXP8 1791 aa11.93□□□□□ -0.5
NCKAP1-206ENST00000492058 WTIPA6NIX2 430 aaPredicted RBP11.93□□□□□ -0.5
NCKAP1-206ENST00000492058 SASH1O94885 1247 aa11.93□□□□□ -0.5
NCKAP1-206ENST00000492058 CAMK2BQ13554 666 aa11.93□□□□□ -0.5
NCKAP1-206ENST00000492058 CD99L2Q8TCZ2 262 aa11.93□□□□□ -0.5
NCKAP1-206ENST00000492058 ISCA1Q9BUE6 129 aa11.93□□□□□ -0.5
NCKAP1-206ENST00000492058 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
NCKAP1-206ENST00000492058 PTPN22Q9Y2R2 807 aa11.93□□□□□ -0.5
NCKAP1-206ENST00000492058 COL4A1P02462 1669 aa11.92□□□□□ -0.5
NCKAP1-206ENST00000492058 WNT10BO00744 389 aa11.92□□□□□ -0.5
NCKAP1-206ENST00000492058 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
NCKAP1-206ENST00000492058 PODNQ7Z5L7 613 aa11.92□□□□□ -0.5
NCKAP1-206ENST00000492058 SCN9AQ15858 1988 aa11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 MANSC4A6NHS7 340 aaPredicted RBP11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 HDGFL1Q5TGJ6 251 aa11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 DDX12PQ92771 950 aa11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 CFHR5Q9BXR6 569 aa11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 EFCC1Q9HA90 598 aa11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 MKI67P46013 3256 aaKnown RBP11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 CEP290O15078 2479 aa11.91□□□□□ -0.5
NCKAP1-206ENST00000492058 XDHP47989 1333 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 IGF2BP3O00425 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 DLL1O00548 723 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 ATP2B4P23634 1241 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 INHBEP58166 350 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 PPP4CP60510 307 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 SLC4A8Q2Y0W8 1093 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 CCDC152Q4G0S7 254 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 LDLRAD1Q5T700 205 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 CLMNQ96JQ2 1002 aa11.9□□□□□ -0.5
NCKAP1-206ENST00000492058 KIAA0100Q14667 2235 aaKnown RBP11.9□□□□□ -0.51
NCKAP1-206ENST00000492058 H0YGN5 161 aa11.89□□□□□ -0.51
NCKAP1-206ENST00000492058 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
NCKAP1-206ENST00000492058 KIAA0825Q8IV33 1275 aa11.89□□□□□ -0.51
NCKAP1-206ENST00000492058 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
NCKAP1-206ENST00000492058 DLG5Q8TDM6 1919 aa11.89□□□□□ -0.51
NCKAP1-206ENST00000492058 TRIOBPQ9H2D6 2365 aa11.89□□□□□ -0.51
NCKAP1-206ENST00000492058 HSP90B1P14625 803 aaKnown RBP11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 CRHR2Q13324 411 aa11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 OTUD7BQ6GQQ9 843 aa11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 APOBEC3FQ8IUX4 373 aaKnown RBP11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 SLC17A8Q8NDX2 589 aa11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 WNK4Q96J92 1243 aa11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 MYD88Q99836 296 aa11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 BABAM1Q9NWV8 329 aa11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
NCKAP1-206ENST00000492058 MAP3K7O43318 606 aa11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 PPP1R12BO60237 982 aaPredicted RBP11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 PDE8AO60658 829 aa11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 SP3Q02447 781 aa11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 TRIM28Q13263 835 aaKnown RBP11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 TTLL5Q6EMB2 1281 aa11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 ARMC5Q96C12 935 aa11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 DEFB129Q9H1M3 183 aa11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 HYPKQ9NX55 129 aa11.87□□□□□ -0.51
NCKAP1-206ENST00000492058 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
NCKAP1-206ENST00000492058 TMPOP42166 694 aaKnown RBP11.86□□□□□ -0.51
NCKAP1-206ENST00000492058 LMOD3Q0VAK6 560 aa11.86□□□□□ -0.51
NCKAP1-206ENST00000492058 NBR1Q14596 966 aa11.86□□□□□ -0.51
NCKAP1-206ENST00000492058 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
NCKAP1-206ENST00000492058 STRIP1Q5VSL9 837 aa11.86□□□□□ -0.51
NCKAP1-206ENST00000492058 NBPF11Q86T75 865 aa11.86□□□□□ -0.51
NCKAP1-206ENST00000492058 HTTP42858 3142 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 CHL1O00533 1208 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 GFRA3O60609 400 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 ZBTB48P10074 688 aaPredicted RBP11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 GTF2IP78347 998 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 CAP1Q01518 475 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 DLGAP5Q15398 846 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 TXNRD3Q86VQ6 643 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 DPF3Q92784 378 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 MINPP1Q9UNW1 487 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 ZNF609O15014 1411 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 MYO3BQ8WXR4 1341 aa11.85□□□□□ -0.51
NCKAP1-206ENST00000492058 CENPFP49454 3210 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 CLRN2A0PK11 232 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 PCCAP05165 728 aaPredicted RBP11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 CCT4P50991 539 aaKnown RBP11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 DUSP27Q5VZP5 1158 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 CCDC146Q8IYE0 955 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 ZNF333Q96JL9 665 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 CDC5LQ99459 802 aaKnown RBP11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 PTPN18Q99952 460 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 COA1Q9GZY4 146 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 VEZTQ9HBM0 779 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 CWC25Q9NXE8 425 aaPredicted RBP11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 PTCH2Q9Y6C5 1203 aa11.84□□□□□ -0.51
NCKAP1-206ENST00000492058 ELL2O00472 640 aaPredicted RBP11.83□□□□□ -0.52
NCKAP1-206ENST00000492058 GJA5P36382 358 aa11.83□□□□□ -0.52
NCKAP1-206ENST00000492058 ARHGEF6Q15052 776 aa11.83□□□□□ -0.52
NCKAP1-206ENST00000492058 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms