RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 TLL2Q9Y6L7 1015 aa28.57■■■□□ 2.16
CPNE9-204ENST00000491802 SPDYE2BA6NHP3 402 aa28.56■■■□□ 2.16
CPNE9-204ENST00000491802 MAST3O60307 1309 aa28.56■■■□□ 2.16
CPNE9-204ENST00000491802 SPDYE6P0CI01 402 aa28.56■■■□□ 2.16
CPNE9-204ENST00000491802 ARID4AP29374 1257 aaPredicted RBP28.56■■■□□ 2.16
CPNE9-204ENST00000491802 HHIPL1Q96JK4 782 aa28.56■■■□□ 2.16
CPNE9-204ENST00000491802 CCDC8Q9H0W5 538 aaPredicted RBP28.56■■■□□ 2.16
CPNE9-204ENST00000491802 SALL1Q9NSC2 1324 aa28.56■■■□□ 2.16
CPNE9-204ENST00000491802 PCDHB15Q9Y5E8 787 aa28.56■■■□□ 2.16
CPNE9-204ENST00000491802 RAB11FIP3O75154 756 aa28.55■■■□□ 2.16
CPNE9-204ENST00000491802 CRKP46108 304 aa28.55■■■□□ 2.16
CPNE9-204ENST00000491802 TTC39AQ5SRH9 613 aa28.55■■■□□ 2.16
CPNE9-204ENST00000491802 AACSQ86V21 672 aa28.55■■■□□ 2.16
CPNE9-204ENST00000491802 APOBEC3FQ8IUX4 373 aaKnown RBP28.55■■■□□ 2.16
CPNE9-204ENST00000491802 UQCRFS1P1P0C7P4 283 aa28.54■■■□□ 2.16
CPNE9-204ENST00000491802 PRDX5P30044 214 aa28.54■■■□□ 2.16
CPNE9-204ENST00000491802 CCDC158Q5M9N0 1113 aa28.54■■■□□ 2.16
CPNE9-204ENST00000491802 PI16Q6UXB8 463 aa28.54■■■□□ 2.16
CPNE9-204ENST00000491802 DLK2Q6UY11 383 aa28.54■■■□□ 2.16
CPNE9-204ENST00000491802 HMG20BQ9P0W2 317 aa28.54■■■□□ 2.16
CPNE9-204ENST00000491802 SCAF8Q9UPN6 1271 aaKnown RBP28.54■■■□□ 2.16
CPNE9-204ENST00000491802 DEFB115Q30KQ5 88 aa28.53■■■□□ 2.16
CPNE9-204ENST00000491802 SAPCD2Q86UD0 394 aa28.53■■■□□ 2.16
CPNE9-204ENST00000491802 ZGPATQ8N5A5 531 aaKnown RBP28.53■■■□□ 2.16
CPNE9-204ENST00000491802 CDCA5Q96FF9 252 aa28.53■■■□□ 2.16
CPNE9-204ENST00000491802 PRMT6Q96LA8 375 aaPredicted RBP28.53■■■□□ 2.16
CPNE9-204ENST00000491802 ZNF408Q9H9D4 720 aa28.53■■■□□ 2.16
CPNE9-204ENST00000491802 ABT1Q9ULW3 272 aaKnown RBP28.53■■■□□ 2.16
CPNE9-204ENST00000491802 AOX1Q06278 1338 aa28.52■■■□□ 2.16
CPNE9-204ENST00000491802 MYO1BO43795 1136 aa28.52■■■□□ 2.16
CPNE9-204ENST00000491802 LDHBP07195 334 aaKnown RBP28.52■■■□□ 2.16
CPNE9-204ENST00000491802 MCAMP43121 646 aa28.52■■■□□ 2.16
CPNE9-204ENST00000491802 CLASRPQ8N2M8 674 aaKnown RBP28.52■■■□□ 2.16
CPNE9-204ENST00000491802 SPATA5Q8NB90 893 aa28.52■■■□□ 2.16
CPNE9-204ENST00000491802 TEKT1Q969V4 418 aa28.52■■■□□ 2.16
CPNE9-204ENST00000491802 MKRN1Q9UHC7 482 aaKnown RBP28.52■■■□□ 2.16
CPNE9-204ENST00000491802 THSD7BQ9C0I4 1608 aa28.51■■■□□ 2.15
CPNE9-204ENST00000491802 CLRN2A0PK11 232 aa28.51■■■□□ 2.15
CPNE9-204ENST00000491802 BCL11AQ9H165 835 aa28.51■■■□□ 2.15
CPNE9-204ENST00000491802 PAPPA2Q9BXP8 1791 aa28.5■■■□□ 2.15
CPNE9-204ENST00000491802 ABCF2Q9UG63 623 aa28.5■■■□□ 2.15
CPNE9-204ENST00000491802 FKBP1BP68106 108 aa28.49■■■□□ 2.15
CPNE9-204ENST00000491802 PPP2R3BQ9Y5P8 575 aa28.49■■■□□ 2.15
CPNE9-204ENST00000491802 HHIPL2Q6UWX4 724 aa28.48■■■□□ 2.15
CPNE9-204ENST00000491802 ZNF512BQ96KM6 892 aaPredicted RBP28.48■■■□□ 2.15
CPNE9-204ENST00000491802 LRRCC1Q9C099 1032 aa28.48■■■□□ 2.15
CPNE9-204ENST00000491802 VEZTQ9HBM0 779 aa28.48■■■□□ 2.15
CPNE9-204ENST00000491802 GBA2Q9HCG7 927 aaPredicted RBP28.48■■■□□ 2.15
CPNE9-204ENST00000491802 PCNTO95613 3336 aa28.48■■■□□ 2.15
CPNE9-204ENST00000491802 IFIT2P09913 472 aaKnown RBP28.47■■■□□ 2.15
CPNE9-204ENST00000491802 VEGFBP49765 207 aa28.47■■■□□ 2.15
CPNE9-204ENST00000491802 DIXDC1Q155Q3 683 aa28.47■■■□□ 2.15
CPNE9-204ENST00000491802 SPDYE2Q495Y8 402 aa28.47■■■□□ 2.15
CPNE9-204ENST00000491802 DZIP1Q86YF9 867 aaKnown RBP28.47■■■□□ 2.15
CPNE9-204ENST00000491802 EXOC6Q8TAG9 804 aa28.47■■■□□ 2.15
CPNE9-204ENST00000491802 ZDHHC15Q96MV8 337 aa28.47■■■□□ 2.15
CPNE9-204ENST00000491802 DCTPP1Q9H773 170 aa28.47■■■□□ 2.15
CPNE9-204ENST00000491802 TDRD3Q9H7E2 651 aaKnown RBP28.47■■■□□ 2.15
CPNE9-204ENST00000491802 SNRKQ9NRH2 765 aa28.47■■■□□ 2.15
CPNE9-204ENST00000491802 AAMPQ13685 434 aa28.46■■■□□ 2.15
CPNE9-204ENST00000491802 SPTY2D1Q68D10 685 aaPredicted RBP28.46■■■□□ 2.15
CPNE9-204ENST00000491802 C2orf69Q8N8R5 385 aa28.46■■■□□ 2.15
CPNE9-204ENST00000491802 AKAP11Q9UKA4 1901 aa28.45■■■□□ 2.15
CPNE9-204ENST00000491802 ECE1P42892 770 aa28.45■■■□□ 2.14
CPNE9-204ENST00000491802 TBC1D9Q6ZT07 1266 aa28.45■■■□□ 2.14
CPNE9-204ENST00000491802 ZNF70Q9UC06 446 aaPredicted RBP28.45■■■□□ 2.14
CPNE9-204ENST00000491802 DAGLAQ9Y4D2 1042 aa28.45■■■□□ 2.14
CPNE9-204ENST00000491802 SMARCA5O60264 1052 aaPredicted RBP28.44■■■□□ 2.14
CPNE9-204ENST00000491802 PRAMEF18Q5VWM3 479 aa28.44■■■□□ 2.14
CPNE9-204ENST00000491802 ERICH6Q7L0X2 663 aa28.44■■■□□ 2.14
CPNE9-204ENST00000491802 DEFB129Q9H1M3 183 aa28.44■■■□□ 2.14
CPNE9-204ENST00000491802 WDR33Q9C0J8 1336 aaKnown RBP28.43■■■□□ 2.14
CPNE9-204ENST00000491802 TNFAIP1Q13829 316 aa28.43■■■□□ 2.14
CPNE9-204ENST00000491802 APOBEC3HQ6NTF7 200 aaKnown RBP28.43■■■□□ 2.14
CPNE9-204ENST00000491802 MYH2Q9UKX2 1941 aa28.42■■■□□ 2.14
CPNE9-204ENST00000491802 ZAP70P43403 619 aa28.42■■■□□ 2.14
CPNE9-204ENST00000491802 HUNKP57058 714 aa28.42■■■□□ 2.14
CPNE9-204ENST00000491802 CAPNS2Q96L46 248 aa28.42■■■□□ 2.14
CPNE9-204ENST00000491802 NF2P35240 595 aa28.41■■■□□ 2.14
CPNE9-204ENST00000491802 IRX6P78412 446 aaPredicted RBP28.41■■■□□ 2.14
CPNE9-204ENST00000491802 FKBP1CQ5VVH2 108 aa28.41■■■□□ 2.14
CPNE9-204ENST00000491802 RAI14Q9P0K7 980 aa28.41■■■□□ 2.14
CPNE9-204ENST00000491802 MAST2Q6P0Q8 1798 aa28.41■■■□□ 2.14
CPNE9-204ENST00000491802 IGSF3O75054 1194 aa28.4■■■□□ 2.14
CPNE9-204ENST00000491802 CYP2E1P05181 493 aaPredicted RBP28.4■■■□□ 2.14
CPNE9-204ENST00000491802 MECOMQ03112 1051 aa28.4■■■□□ 2.14
CPNE9-204ENST00000491802 TMOD2Q9NZR1 351 aa28.4■■■□□ 2.14
CPNE9-204ENST00000491802 LRP2BPQ9P2M1 347 aa28.4■■■□□ 2.14
CPNE9-204ENST00000491802 GAKO14976 1311 aa28.4■■■□□ 2.14
CPNE9-204ENST00000491802 CACNB3P54284 484 aa28.39■■■□□ 2.14
CPNE9-204ENST00000491802 HDAC1Q13547 482 aaPredicted RBP28.39■■■□□ 2.14
CPNE9-204ENST00000491802 SLF2Q8IX21 1173 aa28.39■■■□□ 2.14
CPNE9-204ENST00000491802 TCP10L2B9ZVM9 353 aa28.38■■■□□ 2.13
CPNE9-204ENST00000491802 RASA3Q14644 834 aa28.38■■■□□ 2.13
CPNE9-204ENST00000491802 CYP4F22Q6NT55 531 aa28.38■■■□□ 2.13
CPNE9-204ENST00000491802 ZNF384Q8TF68 577 aa28.38■■■□□ 2.13
CPNE9-204ENST00000491802 FAM163AQ96GL9 167 aaPredicted RBP28.38■■■□□ 2.13
CPNE9-204ENST00000491802 NDUFB9Q9Y6M9 179 aa28.38■■■□□ 2.13
CPNE9-204ENST00000491802 MROH7-TTC4A0A0A0MT08 1334 aa28.38■■■□□ 2.13
CPNE9-204ENST00000491802 MAP2K2P36507 400 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms