RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TTF2Q9UNY4 1162 aaKnown RBP11.47□□□□□ -0.57
BRCA1-219ENST00000491747 MYO5AQ9Y4I1 1855 aaKnown RBP11.47□□□□□ -0.57
BRCA1-219ENST00000491747 RASGRF1Q13972 1273 aa11.46□□□□□ -0.57
BRCA1-219ENST00000491747 CFAP100Q494V2 611 aa11.46□□□□□ -0.57
BRCA1-219ENST00000491747 CDC37L1Q7L3B6 337 aa11.46□□□□□ -0.57
BRCA1-219ENST00000491747 EAF2Q96CJ1 260 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-219ENST00000491747 PRMT6Q96LA8 375 aaPredicted RBP11.46□□□□□ -0.57
BRCA1-219ENST00000491747 DBNDD2Q9BQY9 259 aa11.46□□□□□ -0.57
BRCA1-219ENST00000491747 TLR7Q9NYK1 1049 aaKnown RBP11.46□□□□□ -0.57
BRCA1-219ENST00000491747 KRT26Q7Z3Y9 468 aa11.46□□□□□ -0.58
BRCA1-219ENST00000491747 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.58
BRCA1-219ENST00000491747 DCPSQ96C86 337 aaKnown RBP11.46□□□□□ -0.58
BRCA1-219ENST00000491747 PCDHB15Q9Y5E8 787 aa11.46□□□□□ -0.58
BRCA1-219ENST00000491747 APBB1O00213 710 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 SEC24BO95487 1268 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 MMP14P50281 582 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 PI16Q6UXB8 463 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 TBC1D22AQ8WUA7 517 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 CCDC8Q9H0W5 538 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-219ENST00000491747 GNL3LQ9NVN8 582 aaKnown RBP11.45□□□□□ -0.58
BRCA1-219ENST00000491747 TMEM88BA6NKF7 163 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 ZBTB22O15209 634 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 DLGAP5Q15398 846 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 FAM43AQ8N2R8 423 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 WDR66Q8TBY9 1149 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 RHPN1Q8TCX5 695 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 IL1RAPL2Q9NP60 686 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 DBNLQ9UJU6 430 aaKnown RBP11.45□□□□□ -0.58
BRCA1-219ENST00000491747 DENND2AQ9ULE3 1009 aa11.45□□□□□ -0.58
BRCA1-219ENST00000491747 MYH2Q9UKX2 1941 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 SPDYE2BA6NHP3 402 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 SEMA3EO15041 775 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 HMMRO75330 724 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 SPDYE6P0CI01 402 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 ARID4AP29374 1257 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-219ENST00000491747 PRDX5P30044 214 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 CRKP46108 304 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 HMG20BQ9P0W2 317 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 PITPNM2Q9BZ72 1349 aa11.44□□□□□ -0.58
BRCA1-219ENST00000491747 MCAMP43121 646 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 RBM5P52756 815 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRCA1-219ENST00000491747 GORABQ5T7V8 394 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 PRAMEF18Q5VWM3 479 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 SLKQ9H2G2 1235 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-219ENST00000491747 RWDD1Q9H446 243 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-219ENST00000491747 ZNF408Q9H9D4 720 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 SERPINA10Q9UK55 444 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 SALL1Q9NSC2 1324 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 CLRN2A0PK11 232 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 CELF2O95319 508 aaKnown RBP11.43□□□□□ -0.58
BRCA1-219ENST00000491747 L1TD1Q5T7N2 865 aaKnown RBP11.43□□□□□ -0.58
BRCA1-219ENST00000491747 ERC1Q8IUD2 1116 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 TBC1D32Q96NH3 1257 aa11.43□□□□□ -0.58
BRCA1-219ENST00000491747 HSP90AB4PQ58FF6 505 aa11.42□□□□□ -0.58
BRCA1-219ENST00000491747 CDCA5Q96FF9 252 aa11.42□□□□□ -0.58
BRCA1-219ENST00000491747 TDRD3Q9H7E2 651 aaKnown RBP11.42□□□□□ -0.58
BRCA1-219ENST00000491747 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
BRCA1-219ENST00000491747 PDS5AQ29RF7 1337 aaKnown RBP11.42□□□□□ -0.58
BRCA1-219ENST00000491747 TBC1D9Q6ZT07 1266 aa11.42□□□□□ -0.58
BRCA1-219ENST00000491747 AACSQ86V21 672 aa11.42□□□□□ -0.58
BRCA1-219ENST00000491747 SPATA5Q8NB90 893 aa11.42□□□□□ -0.58
BRCA1-219ENST00000491747 SNRKQ9NRH2 765 aa11.42□□□□□ -0.58
BRCA1-219ENST00000491747 SUGT1Q9Y2Z0 365 aa11.42□□□□□ -0.58
BRCA1-219ENST00000491747 HDLBPQ00341 1268 aaKnown RBP11.41□□□□□ -0.58
BRCA1-219ENST00000491747 DIXDC1Q155Q3 683 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 TTC39AQ5SRH9 613 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 ZNF384Q8TF68 577 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 KIF1BPQ96EK5 621 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 MRIQ9BWK5 157 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 ANTXR1Q9H6X2 564 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 ZNF70Q9UC06 446 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-219ENST00000491747 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
BRCA1-219ENST00000491747 SMARCA5O60264 1052 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-219ENST00000491747 RAB11FIP3O75154 756 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 LDHBP07195 334 aaKnown RBP11.41□□□□□ -0.58
BRCA1-219ENST00000491747 UQCRFS1P1P0C7P4 283 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 APOBEC3HQ6NTF7 200 aaKnown RBP11.41□□□□□ -0.58
BRCA1-219ENST00000491747 TEKT1Q969V4 418 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 KLRG1Q96E93 195 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 DCTPP1Q9H773 170 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 ABCF2Q9UG63 623 aa11.41□□□□□ -0.58
BRCA1-219ENST00000491747 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 CCDC158Q5M9N0 1113 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 ZDHHC15Q96MV8 337 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 TLL2Q9Y6L7 1015 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 NDUFB9Q9Y6M9 179 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 DOCK2Q92608 1830 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 CACNB3P54284 484 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 HHIPL2Q6UWX4 724 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 ZNF512BQ96KM6 892 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-219ENST00000491747 VEZTQ9HBM0 779 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 ABT1Q9ULW3 272 aaKnown RBP11.4□□□□□ -0.58
BRCA1-219ENST00000491747 DAGLAQ9Y4D2 1042 aa11.4□□□□□ -0.58
BRCA1-219ENST00000491747 MAST3O60307 1309 aa11.4□□□□□ -0.59
BRCA1-219ENST00000491747 CNTNAP1P78357 1384 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 RASSF10A6NK89 507 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 MYO1BO43795 1136 aa11.39□□□□□ -0.59
BRCA1-219ENST00000491747 CYP2E1P05181 493 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms