RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 EMP3P54852 163 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 NEXNQ0ZGT2 675 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 FLIIQ13045 1269 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 CWF19L2Q2TBE0 894 aaKnown RBP9.48□□□□□ -0.89
CLDN1-202ENST00000490800 PROX2Q3B8N5 592 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 SAMD7Q7Z3H4 446 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 ITPRIPQ8IWB1 547 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 TNS4Q8IZW8 715 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 TRPM4Q8TD43 1214 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 CCDC136Q96JN2 1154 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 GLIS2Q9BZE0 524 aaPredicted RBP9.48□□□□□ -0.89
CLDN1-202ENST00000490800 PODXL2Q9NZ53 605 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 PGAP2Q9UHJ9 254 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 COL4A1P02462 1669 aa9.48□□□□□ -0.89
CLDN1-202ENST00000490800 WTIPA6NIX2 430 aaPredicted RBP9.47□□□□□ -0.89
CLDN1-202ENST00000490800 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 TRIM6-TRIM34B2RNG4 842 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 H7C1W4 665 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 FOXN1O15353 648 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 UFL1O94874 794 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 AAMPQ13685 434 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 INTS3Q68E01 1043 aaKnown RBP9.47□□□□□ -0.89
CLDN1-202ENST00000490800 ANKRD18AQ8IVF6 992 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 DPF2Q92785 391 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 MARVELD3Q96A59 401 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 TMUB1Q9BVT8 246 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 GGA1Q9UJY5 639 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 DDX19BQ9UMR2 479 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 CDHR2Q9BYE9 1310 aa9.47□□□□□ -0.89
CLDN1-202ENST00000490800 WDR33Q9C0J8 1336 aaKnown RBP9.47□□□□□ -0.89
CLDN1-202ENST00000490800 DDX60Q8IY21 1712 aaKnown RBP9.47□□□□□ -0.89
CLDN1-202ENST00000490800 F6X3S4 739 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 ST18O60284 1047 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 CELF2O95319 508 aaKnown RBP9.46□□□□□ -0.9
CLDN1-202ENST00000490800 EGFRP00533 1210 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 GRM1Q13255 1194 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 FKBP5Q13451 457 aaPredicted RBP9.46□□□□□ -0.9
CLDN1-202ENST00000490800 TBC1D10BQ4KMP7 808 aaPredicted RBP9.46□□□□□ -0.9
CLDN1-202ENST00000490800 CYP4F22Q6NT55 531 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 DLK2Q6UY11 383 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 USP48Q86UV5 1035 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 GREM2Q9H772 168 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 WBP1LQ9NX94 342 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 RTL9Q8NET4 1388 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 DUOX1Q9NRD9 1551 aa9.46□□□□□ -0.9
CLDN1-202ENST00000490800 ZBTB7BO15156 539 aaPredicted RBP9.45□□□□□ -0.9
CLDN1-202ENST00000490800 VIL1P09327 827 aaKnown RBP9.45□□□□□ -0.9
CLDN1-202ENST00000490800 SSTR3P32745 418 aaPredicted RBP9.45□□□□□ -0.9
CLDN1-202ENST00000490800 PSEN2P49810 448 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 CTSWP56202 376 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 GCKRQ14397 625 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 UBE3BQ7Z3V4 1068 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 AIDAQ96BJ3 306 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 FAM163AQ96GL9 167 aaPredicted RBP9.45□□□□□ -0.9
CLDN1-202ENST00000490800 CAPNS2Q96L46 248 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 CDC5LQ99459 802 aaKnown RBP9.45□□□□□ -0.9
CLDN1-202ENST00000490800 ZNF408Q9H9D4 720 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 ZBTB40Q9NUA8 1239 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 PNMA3Q9UL41 463 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 PCDHB15Q9Y5E8 787 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 TLL2Q9Y6L7 1015 aa9.45□□□□□ -0.9
CLDN1-202ENST00000490800 RCCD1A6NED2 376 aa9.44□□□□□ -0.9
CLDN1-202ENST00000490800 C3orf80F5H4A9 247 aa9.44□□□□□ -0.9
CLDN1-202ENST00000490800 ATP2B4P23634 1241 aa9.44□□□□□ -0.9
CLDN1-202ENST00000490800 RPS12P25398 132 aaKnown RBP9.44□□□□□ -0.9
CLDN1-202ENST00000490800 CTCFP49711 727 aaPredicted RBP9.44□□□□□ -0.9
CLDN1-202ENST00000490800 CCT4P50991 539 aaKnown RBP9.44□□□□□ -0.9
CLDN1-202ENST00000490800 SAPCD2Q86UD0 394 aa9.44□□□□□ -0.9
CLDN1-202ENST00000490800 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
CLDN1-202ENST00000490800 DNAAF4Q8WXU2 420 aa9.44□□□□□ -0.9
CLDN1-202ENST00000490800 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
CLDN1-202ENST00000490800 BSDC1Q9NW68 430 aaPredicted RBP9.44□□□□□ -0.9
CLDN1-202ENST00000490800 MINPP1Q9UNW1 487 aa9.44□□□□□ -0.9
CLDN1-202ENST00000490800 XDHP47989 1333 aa9.44□□□□□ -0.9
CLDN1-202ENST00000490800 SMAPO00193 183 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 AOC2O75106 756 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 ECE1P42892 770 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 LBX1P52954 281 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 CASP7P55210 303 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 MAP2K1Q02750 393 aaPredicted RBP9.43□□□□□ -0.9
CLDN1-202ENST00000490800 SLC4A10Q6U841 1118 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 PODNQ7Z5L7 613 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 LINS1Q8NG48 757 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 TATDN2Q93075 761 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 PLA2G12BQ9BX93 195 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 PRDM10Q9NQV6 1147 aa9.43□□□□□ -0.9
CLDN1-202ENST00000490800 LRRC37AA6NMS7 1700 aa9.42□□□□□ -0.9
CLDN1-202ENST00000490800 FAM205CA6NFA0 338 aa9.42□□□□□ -0.9
CLDN1-202ENST00000490800 IGHDP01880 384 aa9.42□□□□□ -0.9
CLDN1-202ENST00000490800 CSF1RP07333 972 aa9.42□□□□□ -0.9
CLDN1-202ENST00000490800 ITGA6P23229 1130 aa9.42□□□□□ -0.9
CLDN1-202ENST00000490800 IGHMBP2P38935 993 aaKnown RBP9.42□□□□□ -0.9
CLDN1-202ENST00000490800 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
CLDN1-202ENST00000490800 KRT26Q7Z3Y9 468 aa9.42□□□□□ -0.9
CLDN1-202ENST00000490800 AGBL3Q8NEM8 1001 aa9.42□□□□□ -0.9
CLDN1-202ENST00000490800 DCPSQ96C86 337 aaKnown RBP9.42□□□□□ -0.9
CLDN1-202ENST00000490800 BEGAINQ9BUH8 593 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms