RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 LRP10Q7Z4F1 713 aa6.22□□□□□ -1.41
EPCAM-206ENST00000490733 PRM3Q9NNZ6 103 aa6.22□□□□□ -1.41
EPCAM-206ENST00000490733 POLMQ9NP87 494 aaPredicted RBP6.22□□□□□ -1.41
EPCAM-206ENST00000490733 NOB1Q9ULX3 412 aaKnown RBP6.22□□□□□ -1.41
EPCAM-206ENST00000490733 USP16Q9Y5T5 823 aa6.22□□□□□ -1.41
EPCAM-206ENST00000490733 TAF1LQ8IZX4 1826 aa6.22□□□□□ -1.41
EPCAM-206ENST00000490733 RREB1Q92766 1687 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 PTCD1O75127 700 aaKnown RBP6.21□□□□□ -1.42
EPCAM-206ENST00000490733 PPFIA3O75145 1194 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 ANXA1P04083 346 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 TRIM27P14373 513 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 EIF2S2P20042 333 aaKnown RBP6.21□□□□□ -1.42
EPCAM-206ENST00000490733 RXRBP28702 533 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 ABL2P42684 1182 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 SCTRP47872 440 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 ERVK-9P63128 1117 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 PTSQ03393 145 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 VAC14Q08AM6 782 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 HDGFL1Q5TGJ6 251 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 FOXD4L5Q5VV16 416 aaPredicted RBP6.21□□□□□ -1.42
EPCAM-206ENST00000490733 CC2D2BQ6DHV5 1058 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 KRT27Q7Z3Y8 459 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 TTC5Q8N0Z6 440 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 RNF217Q8TC41 542 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 ZNF592Q92610 1267 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 FRAT1Q92837 279 aaPredicted RBP6.21□□□□□ -1.42
EPCAM-206ENST00000490733 SYTL4Q96C24 671 aaPredicted RBP6.21□□□□□ -1.42
EPCAM-206ENST00000490733 FMNL2Q96PY5 1086 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 CHPF2Q9P2E5 772 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 CEP126Q9P2H0 1117 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 PCDHB11Q9Y5F2 797 aa6.21□□□□□ -1.42
EPCAM-206ENST00000490733 TNS1Q9HBL0 1735 aaKnown RBP6.21□□□□□ -1.42
EPCAM-206ENST00000490733 NUP188Q5SRE5 1749 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 ATP5J2-PTCD1G3V325 749 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 SNRPA1P09661 255 aaKnown RBP6.2□□□□□ -1.42
EPCAM-206ENST00000490733 PIP4K2AP48426 406 aaPredicted RBP6.2□□□□□ -1.42
EPCAM-206ENST00000490733 CCDC30Q5VVM6 783 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 ZKSCAN2Q63HK3 967 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 NBPF10Q6P3W6 841 aaKnown RBP6.2□□□□□ -1.42
EPCAM-206ENST00000490733 ATF7IPQ6VMQ6 1270 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 CCDC125Q86Z20 511 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 DNAJC10Q8IXB1 793 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 NBPF15Q8N660 670 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 PANK1Q8TE04 598 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 CCDC85AQ96PX6 553 aaPredicted RBP6.2□□□□□ -1.42
EPCAM-206ENST00000490733 CRBNQ96SW2 442 aa6.2□□□□□ -1.42
EPCAM-206ENST00000490733 PHAXQ9H814 394 aaKnown RBP6.2□□□□□ -1.42
EPCAM-206ENST00000490733 PALLDQ8WX93 1383 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 ARFGEF2Q9Y6D5 1785 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 A1BGP04217 495 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 FLIIQ13045 1269 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 ITPK1Q13572 414 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 PDE3AQ14432 1141 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 EXOC6Q8TAG9 804 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 ARHGAP45Q92619 1136 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 CLUAP1Q96AJ1 413 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 COG6Q9Y2V7 657 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 ABCC4O15439 1325 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 KIF16BQ96L93 1317 aa6.19□□□□□ -1.42
EPCAM-206ENST00000490733 ADCY9O60503 1353 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 LOC102724428A0A0B4J2F2 783 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 F6X3S4 739 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 VSIG8P0DPA2 414 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 CYP19A1P11511 503 aaPredicted RBP6.18□□□□□ -1.42
EPCAM-206ENST00000490733 KCNQ4P56696 695 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 SIK1P57059 783 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 TSGA10IPQ3SY00 556 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 FAM196AQ6ZSG2 479 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 TMEM57Q8N5G2 664 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.18□□□□□ -1.42
EPCAM-206ENST00000490733 STK31Q9BXU1 1019 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 OSBPL3Q9H4L5 887 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 DDX21Q9NR30 783 aaKnown RBP eCLIP6.18□□□□□ -1.42
EPCAM-206ENST00000490733 DBF4Q9UBU7 674 aaPredicted RBP6.18□□□□□ -1.42
EPCAM-206ENST00000490733 PTPRCP08575 1304 aa6.18□□□□□ -1.42
EPCAM-206ENST00000490733 A0A1W2PRU2 124 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 SLC35F4A4IF30 521 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 IPO8O15397 1037 aaKnown RBP6.17□□□□□ -1.42
EPCAM-206ENST00000490733 TRAK2O60296 914 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 TRIM37O94972 964 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 NEFLP07196 543 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 MYL6BP14649 208 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 CANXP27824 592 aaKnown RBP6.17□□□□□ -1.42
EPCAM-206ENST00000490733 MVPQ14764 893 aaKnown RBP6.17□□□□□ -1.42
EPCAM-206ENST00000490733 INTS5Q6P9B9 1019 aaKnown RBP6.17□□□□□ -1.42
EPCAM-206ENST00000490733 DZIP1LQ8IYY4 767 aaKnown RBP6.17□□□□□ -1.42
EPCAM-206ENST00000490733 PHTF2Q8N3S3 785 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 CCDC155Q8N6L0 562 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 POM121Q96HA1 1249 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 NUP98P52948 1817 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 AFDNP55196 1824 aaKnown RBP6.17□□□□□ -1.42
EPCAM-206ENST00000490733 UBR3Q6ZT12 1888 aa6.17□□□□□ -1.42
EPCAM-206ENST00000490733 PXDNLA1KZ92 1463 aa6.16□□□□□ -1.42
EPCAM-206ENST00000490733 RGPD3A6NKT7 1758 aaPredicted RBP6.16□□□□□ -1.42
EPCAM-206ENST00000490733 ANKRD36CQ5JPF3 1778 aa6.16□□□□□ -1.42
EPCAM-206ENST00000490733 RGPD4Q7Z3J3 1758 aa6.16□□□□□ -1.42
EPCAM-206ENST00000490733 TUBGCP6Q96RT7 1819 aa6.16□□□□□ -1.42
EPCAM-206ENST00000490733 PI4KAP2A4QPH2 592 aa6.16□□□□□ -1.42
EPCAM-206ENST00000490733 MEN1O00255 615 aa6.16□□□□□ -1.42
EPCAM-206ENST00000490733 RNF144AP50876 292 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms