RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 SALL1Q9NSC2 1324 aa18.96■□□□□ 0.63
VPS26A-207ENST00000490696 RBM5P52756 815 aaKnown RBP eCLIP18.95■□□□□ 0.62
VPS26A-207ENST00000490696 CDCA5Q96FF9 252 aa18.95■□□□□ 0.62
VPS26A-207ENST00000490696 MRIQ9BWK5 157 aa18.95■□□□□ 0.62
VPS26A-207ENST00000490696 MKRN1Q9UHC7 482 aaKnown RBP18.95■□□□□ 0.62
VPS26A-207ENST00000490696 ABT1Q9ULW3 272 aaKnown RBP18.95■□□□□ 0.62
VPS26A-207ENST00000490696 TLL2Q9Y6L7 1015 aa18.95■□□□□ 0.62
VPS26A-207ENST00000490696 ARID4AP29374 1257 aaPredicted RBP18.94■□□□□ 0.62
VPS26A-207ENST00000490696 HSP90AB4PQ58FF6 505 aa18.94■□□□□ 0.62
VPS26A-207ENST00000490696 GORABQ5T7V8 394 aa18.94■□□□□ 0.62
VPS26A-207ENST00000490696 ERC1Q8IUD2 1116 aa18.94■□□□□ 0.62
VPS26A-207ENST00000490696 APOBEC3FQ8IUX4 373 aaKnown RBP18.94■□□□□ 0.62
VPS26A-207ENST00000490696 DBNDD2Q9BQY9 259 aa18.94■□□□□ 0.62
VPS26A-207ENST00000490696 MAST3O60307 1309 aa18.94■□□□□ 0.62
VPS26A-207ENST00000490696 ECM29Q5VYK3 1845 aa18.93■□□□□ 0.62
VPS26A-207ENST00000490696 CLRN2A0PK11 232 aa18.93■□□□□ 0.62
VPS26A-207ENST00000490696 MYO1BO43795 1136 aa18.93■□□□□ 0.62
VPS26A-207ENST00000490696 PRDX5P30044 214 aa18.93■□□□□ 0.62
VPS26A-207ENST00000490696 SAPCD2Q86UD0 394 aa18.93■□□□□ 0.62
VPS26A-207ENST00000490696 TEKT1Q969V4 418 aa18.93■□□□□ 0.62
VPS26A-207ENST00000490696 EAF2Q96CJ1 260 aaPredicted RBP18.93■□□□□ 0.62
VPS26A-207ENST00000490696 DEFB115Q30KQ5 88 aa18.92■□□□□ 0.62
VPS26A-207ENST00000490696 SPDYE2Q495Y8 402 aa18.92■□□□□ 0.62
VPS26A-207ENST00000490696 PRAMEF18Q5VWM3 479 aa18.92■□□□□ 0.62
VPS26A-207ENST00000490696 RHPN1Q8TCX5 695 aa18.92■□□□□ 0.62
VPS26A-207ENST00000490696 ZDHHC15Q96MV8 337 aa18.92■□□□□ 0.62
VPS26A-207ENST00000490696 GBA2Q9HCG7 927 aaPredicted RBP18.92■□□□□ 0.62
VPS26A-207ENST00000490696 HMG20BQ9P0W2 317 aa18.92■□□□□ 0.62
VPS26A-207ENST00000490696 DBNLQ9UJU6 430 aaKnown RBP18.92■□□□□ 0.62
VPS26A-207ENST00000490696 LDHBP07195 334 aaKnown RBP18.91■□□□□ 0.62
VPS26A-207ENST00000490696 UQCRFS1P1P0C7P4 283 aa18.91■□□□□ 0.62
VPS26A-207ENST00000490696 MCAMP43121 646 aa18.91■□□□□ 0.62
VPS26A-207ENST00000490696 VEGFBP49765 207 aa18.91■□□□□ 0.62
VPS26A-207ENST00000490696 HHIPL2Q6UWX4 724 aa18.91■□□□□ 0.62
VPS26A-207ENST00000490696 PI16Q6UXB8 463 aa18.91■□□□□ 0.62
VPS26A-207ENST00000490696 ZGPATQ8N5A5 531 aaKnown RBP18.91■□□□□ 0.62
VPS26A-207ENST00000490696 DEFB129Q9H1M3 183 aa18.91■□□□□ 0.62
VPS26A-207ENST00000490696 TDRD3Q9H7E2 651 aaKnown RBP18.91■□□□□ 0.62
VPS26A-207ENST00000490696 TLR7Q9NYK1 1049 aaKnown RBP18.91■□□□□ 0.62
VPS26A-207ENST00000490696 ZNF70Q9UC06 446 aaPredicted RBP18.91■□□□□ 0.62
VPS26A-207ENST00000490696 PCNTO95613 3336 aa18.9■□□□□ 0.62
VPS26A-207ENST00000490696 APOBEC3HQ6NTF7 200 aaKnown RBP18.9■□□□□ 0.62
VPS26A-207ENST00000490696 SPATA5Q8NB90 893 aa18.9■□□□□ 0.62
VPS26A-207ENST00000490696 KIF1BPQ96EK5 621 aa18.9■□□□□ 0.62
VPS26A-207ENST00000490696 HHIPL1Q96JK4 782 aa18.9■□□□□ 0.62
VPS26A-207ENST00000490696 CCDC8Q9H0W5 538 aaPredicted RBP18.9■□□□□ 0.62
VPS26A-207ENST00000490696 VEZTQ9HBM0 779 aa18.9■□□□□ 0.62
VPS26A-207ENST00000490696 RAB11FIP3O75154 756 aa18.89■□□□□ 0.61
VPS26A-207ENST00000490696 DIXDC1Q155Q3 683 aa18.89■□□□□ 0.61
VPS26A-207ENST00000490696 CCDC158Q5M9N0 1113 aa18.89■□□□□ 0.61
VPS26A-207ENST00000490696 C2orf69Q8N8R5 385 aa18.89■□□□□ 0.61
VPS26A-207ENST00000490696 ZNF512BQ96KM6 892 aaPredicted RBP18.89■□□□□ 0.61
VPS26A-207ENST00000490696 CRBNQ96SW2 442 aa18.89■□□□□ 0.61
VPS26A-207ENST00000490696 IL1RAPL2Q9NP60 686 aa18.89■□□□□ 0.61
VPS26A-207ENST00000490696 HSPA1AP0DMV8 641 aaKnown RBP18.88■□□□□ 0.61
VPS26A-207ENST00000490696 HSPA1BP0DMV9 641 aaKnown RBP18.88■□□□□ 0.61
VPS26A-207ENST00000490696 HUNKP57058 714 aa18.88■□□□□ 0.61
VPS26A-207ENST00000490696 TTC39AQ5SRH9 613 aa18.88■□□□□ 0.61
VPS26A-207ENST00000490696 AACSQ86V21 672 aa18.88■□□□□ 0.61
VPS26A-207ENST00000490696 ABCF2Q9UG63 623 aa18.88■□□□□ 0.61
VPS26A-207ENST00000490696 DAGLAQ9Y4D2 1042 aa18.88■□□□□ 0.61
VPS26A-207ENST00000490696 PPP2R3BQ9Y5P8 575 aa18.88■□□□□ 0.61
VPS26A-207ENST00000490696 APBB1O00213 710 aa18.87■□□□□ 0.61
VPS26A-207ENST00000490696 FKBP1BP68106 108 aa18.87■□□□□ 0.61
VPS26A-207ENST00000490696 SPTY2D1Q68D10 685 aaPredicted RBP18.87■□□□□ 0.61
VPS26A-207ENST00000490696 CYP4F22Q6NT55 531 aa18.87■□□□□ 0.61
VPS26A-207ENST00000490696 CAPNS2Q96L46 248 aa18.87■□□□□ 0.61
VPS26A-207ENST00000490696 WDR33Q9C0J8 1336 aaKnown RBP18.87■□□□□ 0.61
VPS26A-207ENST00000490696 AKAP11Q9UKA4 1901 aa18.87■□□□□ 0.61
VPS26A-207ENST00000490696 PCDHB15Q9Y5E8 787 aa18.87■□□□□ 0.61
VPS26A-207ENST00000490696 PAPPA2Q9BXP8 1791 aa18.86■□□□□ 0.61
VPS26A-207ENST00000490696 TNFAIP1Q13829 316 aa18.86■□□□□ 0.61
VPS26A-207ENST00000490696 RASA3Q14644 834 aa18.86■□□□□ 0.61
VPS26A-207ENST00000490696 TBC1D9Q6ZT07 1266 aa18.86■□□□□ 0.61
VPS26A-207ENST00000490696 ERICH6Q7L0X2 663 aa18.86■□□□□ 0.61
VPS26A-207ENST00000490696 CLASRPQ8N2M8 674 aaKnown RBP18.86■□□□□ 0.61
VPS26A-207ENST00000490696 GAKO14976 1311 aa18.85■□□□□ 0.61
VPS26A-207ENST00000490696 NF2P35240 595 aa18.85■□□□□ 0.61
VPS26A-207ENST00000490696 ECE1P42892 770 aa18.85■□□□□ 0.61
VPS26A-207ENST00000490696 PAXIP1Q6ZW49 1069 aaPredicted RBP18.85■□□□□ 0.61
VPS26A-207ENST00000490696 DZIP1Q86YF9 867 aaKnown RBP18.85■□□□□ 0.61
VPS26A-207ENST00000490696 ZNF384Q8TF68 577 aa18.85■□□□□ 0.61
VPS26A-207ENST00000490696 SNRKQ9NRH2 765 aa18.85■□□□□ 0.61
VPS26A-207ENST00000490696 SSC5DA1L4H1 1573 aa18.85■□□□□ 0.61
VPS26A-207ENST00000490696 TCP10L2B9ZVM9 353 aa18.84■□□□□ 0.61
VPS26A-207ENST00000490696 CACNB3P54284 484 aa18.84■□□□□ 0.61
VPS26A-207ENST00000490696 MECOMQ03112 1051 aa18.84■□□□□ 0.61
VPS26A-207ENST00000490696 FKBP1CQ5VVH2 108 aa18.84■□□□□ 0.61
VPS26A-207ENST00000490696 MOB2Q70IA6 237 aa18.84■□□□□ 0.61
VPS26A-207ENST00000490696 FAM163AQ96GL9 167 aaPredicted RBP18.84■□□□□ 0.61
VPS26A-207ENST00000490696 TEPSINQ96N21 525 aa18.84■□□□□ 0.61
VPS26A-207ENST00000490696 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
VPS26A-207ENST00000490696 MYH2Q9UKX2 1941 aa18.83■□□□□ 0.6
VPS26A-207ENST00000490696 CYP2E1P05181 493 aaPredicted RBP18.83■□□□□ 0.6
VPS26A-207ENST00000490696 NBPF12Q5TAG4 269 aaPredicted RBP18.83■□□□□ 0.6
VPS26A-207ENST00000490696 RGMBQ6NW40 437 aa18.83■□□□□ 0.6
VPS26A-207ENST00000490696 CDC42EP5Q6NZY7 148 aa18.83■□□□□ 0.6
VPS26A-207ENST00000490696 NSUN4Q96CB9 384 aaKnown RBP18.83■□□□□ 0.6
VPS26A-207ENST00000490696 TMOD2Q9NZR1 351 aa18.83■□□□□ 0.6
VPS26A-207ENST00000490696 THSD7BQ9C0I4 1608 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms