RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CKAP2LQ8IYA6 745 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 CNNM3Q8NE01 707 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 C6orf50Q9HD87 102 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 B4DLN1 442 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 PIK3C2BO00750 1634 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 CPA1P15085 419 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 MRPL12P52815 198 aaKnown RBP16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 CCDC70Q6NSX1 233 aa16.57■□□□□ 0.24
ARHGEF39-205ENST00000490638 CALML3P27482 149 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 SGSM2O43147 1006 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 PPP1R12BO60237 982 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 LIG1P18858 919 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 TTLL6Q8N841 843 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 ARHGEF1Q92888 912 aaKnown RBP16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 AOX1Q06278 1338 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 USP17L12C9JPN9 530 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 USP17L21D6R901 530 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 AK2P54819 239 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 GPCPD1Q9NPB8 672 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
ARHGEF39-205ENST00000490638 TRPM1Q7Z4N2 1603 aa16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 PARP1P09874 1014 aaKnown RBP16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 ADRA2BP18089 450 aa16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 PPFIBP1Q86W92 1011 aa16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 TRMT2AQ8IZ69 625 aaKnown RBP16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 DBNDD1Q9H9R9 158 aa16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 VTI1AQ96AJ9 217 aa16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 SPATA31A1Q5TZJ5 1347 aa16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 CYP19A1P11511 503 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 MARCH10Q8NA82 808 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF39-205ENST00000490638 PDE6AP16499 860 aa16.54■□□□□ 0.24
ARHGEF39-205ENST00000490638 CCDC93Q567U6 631 aa16.54■□□□□ 0.24
ARHGEF39-205ENST00000490638 DALRD3Q5D0E6 543 aaKnown RBP16.54■□□□□ 0.24
ARHGEF39-205ENST00000490638 PTPRUQ92729 1446 aa16.54■□□□□ 0.24
ARHGEF39-205ENST00000490638 GNA11P29992 359 aa16.54■□□□□ 0.24
ARHGEF39-205ENST00000490638 SULF1Q8IWU6 871 aa16.54■□□□□ 0.24
ARHGEF39-205ENST00000490638 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
ARHGEF39-205ENST00000490638 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 SLC1A4P43007 532 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 CC2D2BQ6DHV5 1058 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 NEXMIFQ5QGS0 1516 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 NPR1P16066 1061 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 ADORA1P30542 326 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 RUFY3Q7L099 469 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 PAF1Q8N7H5 531 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 SPC24Q8NBT2 197 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 RAD17O75943 681 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 TTLL11Q8NHH1 800 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 LRRIQ1Q96JM4 1722 aa16.53■□□□□ 0.24
ARHGEF39-205ENST00000490638 TFAP4Q01664 338 aa16.52■□□□□ 0.24
ARHGEF39-205ENST00000490638 ERMNQ8TAM6 284 aa16.52■□□□□ 0.24
ARHGEF39-205ENST00000490638 DEF6Q9H4E7 631 aa16.52■□□□□ 0.24
ARHGEF39-205ENST00000490638 ANGEL1Q9UNK9 670 aaKnown RBP16.52■□□□□ 0.24
ARHGEF39-205ENST00000490638 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
ARHGEF39-205ENST00000490638 CPXCR1Q8N123 301 aa16.52■□□□□ 0.24
ARHGEF39-205ENST00000490638 CSADQ9Y600 493 aa16.52■□□□□ 0.24
ARHGEF39-205ENST00000490638 PSDA5PKW4 1024 aaPredicted RBP16.52■□□□□ 0.23
ARHGEF39-205ENST00000490638 KIF20AO95235 890 aa16.52■□□□□ 0.23
ARHGEF39-205ENST00000490638 BMP15O95972 392 aa16.52■□□□□ 0.23
ARHGEF39-205ENST00000490638 EIF5P55010 431 aaKnown RBP16.52■□□□□ 0.23
ARHGEF39-205ENST00000490638 AMPD3Q01432 767 aa16.52■□□□□ 0.23
ARHGEF39-205ENST00000490638 C8orf34Q49A92 452 aa16.52■□□□□ 0.23
ARHGEF39-205ENST00000490638 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.23
ARHGEF39-205ENST00000490638 DBNLQ9UJU6 430 aaKnown RBP16.52■□□□□ 0.23
ARHGEF39-205ENST00000490638 TCP10L2B9ZVM9 353 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 SLC27A2O14975 620 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 C21orf2O43822 256 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 CTDSPL2Q05D32 466 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 NOM1Q5C9Z4 860 aaKnown RBP16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 TNPO1Q92973 898 aaKnown RBP16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 BEGAINQ9BUH8 593 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 TRIM75PA6NK02 468 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 PTPDC1A2A3K4 754 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 SMTNL1A8MU46 457 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 CIAO1O76071 339 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 GRAPQ13588 217 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 GRAPLQ8TC17 118 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 IVNS1ABPQ9Y6Y0 642 aa16.51■□□□□ 0.23
ARHGEF39-205ENST00000490638 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 SYCE3A1L190 88 aa16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 FILIP1Q7Z7B0 1213 aa16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 FCHSD1Q86WN1 690 aa16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 SDR42E1Q8WUS8 393 aa16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 COL15A1P39059 1388 aa16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 CFAP100Q494V2 611 aa16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 DCPSQ96C86 337 aaKnown RBP16.5■□□□□ 0.23
ARHGEF39-205ENST00000490638 PATL2C9JE40 543 aaKnown RBP16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 ANO10Q9NW15 660 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 H7C1W4 665 aa16.49■□□□□ 0.23
ARHGEF39-205ENST00000490638 SYNE4Q8N205 404 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms