RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 WDHD1O75717 1129 aaPredicted RBP9.6□□□□□ -0.87
COL9A1-209ENST00000489861 INHAP05111 366 aa9.6□□□□□ -0.87
COL9A1-209ENST00000489861 RASA3Q14644 834 aa9.6□□□□□ -0.87
COL9A1-209ENST00000489861 TTLL5Q6EMB2 1281 aa9.6□□□□□ -0.87
COL9A1-209ENST00000489861 USP38Q8NB14 1042 aa9.6□□□□□ -0.87
COL9A1-209ENST00000489861 MTMR14Q8NCE2 650 aa9.6□□□□□ -0.87
COL9A1-209ENST00000489861 HELBQ8NG08 1087 aaPredicted RBP9.6□□□□□ -0.87
COL9A1-209ENST00000489861 PRMT6Q96LA8 375 aaPredicted RBP9.6□□□□□ -0.87
COL9A1-209ENST00000489861 ISCA1Q9BUE6 129 aa9.6□□□□□ -0.87
COL9A1-209ENST00000489861 ZCCHC17Q9NP64 241 aaKnown RBP9.6□□□□□ -0.87
COL9A1-209ENST00000489861 ARAP2Q8WZ64 1704 aa9.59□□□□□ -0.87
COL9A1-209ENST00000489861 FAM205AQ6ZU69 1335 aa9.59□□□□□ -0.87
COL9A1-209ENST00000489861 ATP5J2-PTCD1G3V325 749 aa9.59□□□□□ -0.87
COL9A1-209ENST00000489861 CETPP11597 493 aa9.59□□□□□ -0.87
COL9A1-209ENST00000489861 MDM2Q00987 491 aaPredicted RBP9.59□□□□□ -0.87
COL9A1-209ENST00000489861 CC2D1BQ5T0F9 858 aaKnown RBP9.59□□□□□ -0.87
COL9A1-209ENST00000489861 CERS5Q8N5B7 392 aa9.59□□□□□ -0.87
COL9A1-209ENST00000489861 PNISRQ8TF01 805 aaKnown RBP9.59□□□□□ -0.87
COL9A1-209ENST00000489861 TTYH1Q9H313 450 aaPredicted RBP9.59□□□□□ -0.87
COL9A1-209ENST00000489861 VEZTQ9HBM0 779 aa9.59□□□□□ -0.87
COL9A1-209ENST00000489861 SPDYE2BA6NHP3 402 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 IRF6O14896 467 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 SPDYE6P0CI01 402 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 CAPN2P17655 700 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 KLRK1P26718 216 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 GTF2IP78347 998 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 MAP3K9P80192 1104 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.58□□□□□ -0.88
COL9A1-209ENST00000489861 TEPSINQ96N21 525 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
COL9A1-209ENST00000489861 COA1Q9GZY4 146 aa9.58□□□□□ -0.88
COL9A1-209ENST00000489861 FOSL2P15408 326 aa9.57□□□□□ -0.88
COL9A1-209ENST00000489861 FLT3LGP49771 235 aa9.57□□□□□ -0.88
COL9A1-209ENST00000489861 CFAP100Q494V2 611 aa9.57□□□□□ -0.88
COL9A1-209ENST00000489861 NBPF3Q9H094 633 aa9.57□□□□□ -0.88
COL9A1-209ENST00000489861 SNCAIPQ9Y6H5 919 aa9.57□□□□□ -0.88
COL9A1-209ENST00000489861 PFASO15067 1338 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 AK9Q5TCS8 1911 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 F8W031 263 aaPredicted RBP9.56□□□□□ -0.88
COL9A1-209ENST00000489861 PER1O15534 1290 aaPredicted RBP9.56□□□□□ -0.88
COL9A1-209ENST00000489861 BCRP11274 1271 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 FCGRTP55899 365 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 SNAPC2Q13487 334 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 ANKLE1Q8NAG6 615 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 PXYLP1Q8TE99 480 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.56□□□□□ -0.88
COL9A1-209ENST00000489861 C11orf49Q9H6J7 331 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 MINPP1Q9UNW1 487 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
COL9A1-209ENST00000489861 CSADQ9Y600 493 aa9.56□□□□□ -0.88
COL9A1-209ENST00000489861 MYH3P11055 1940 aa9.55□□□□□ -0.88
COL9A1-209ENST00000489861 LTBP2Q14767 1821 aa9.55□□□□□ -0.88
COL9A1-209ENST00000489861 PDHXO00330 501 aa9.55□□□□□ -0.88
COL9A1-209ENST00000489861 MYO1BO43795 1136 aa9.55□□□□□ -0.88
COL9A1-209ENST00000489861 U2AF1L5P0DN76 240 aaPredicted RBP9.55□□□□□ -0.88
COL9A1-209ENST00000489861 HSPA5P11021 654 aaKnown RBP9.55□□□□□ -0.88
COL9A1-209ENST00000489861 CCT4P50991 539 aaKnown RBP9.55□□□□□ -0.88
COL9A1-209ENST00000489861 U2AF1Q01081 240 aaKnown RBP eCLIP9.55□□□□□ -0.88
COL9A1-209ENST00000489861 ALYREFQ86V81 257 aaKnown RBP9.55□□□□□ -0.88
COL9A1-209ENST00000489861 ERO1BQ86YB8 467 aa9.55□□□□□ -0.88
COL9A1-209ENST00000489861 ANKRD18AQ8IVF6 992 aa9.55□□□□□ -0.88
COL9A1-209ENST00000489861 TMEM39BQ9GZU3 492 aa9.55□□□□□ -0.88
COL9A1-209ENST00000489861 MOGSQ13724 837 aa9.54□□□□□ -0.88
COL9A1-209ENST00000489861 CNGB1Q14028 1251 aaPredicted RBP9.54□□□□□ -0.88
COL9A1-209ENST00000489861 CCDC152Q4G0S7 254 aa9.54□□□□□ -0.88
COL9A1-209ENST00000489861 ANKRD23Q86SG2 305 aa9.54□□□□□ -0.88
COL9A1-209ENST00000489861 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.54□□□□□ -0.88
COL9A1-209ENST00000489861 PLBD2Q8NHP8 589 aa9.54□□□□□ -0.88
COL9A1-209ENST00000489861 ADAMTS19Q8TE59 1207 aa9.54□□□□□ -0.88
COL9A1-209ENST00000489861 JARID2Q92833 1246 aaPredicted RBP9.54□□□□□ -0.88
COL9A1-209ENST00000489861 ZKSCAN4Q969J2 545 aaPredicted RBP9.54□□□□□ -0.88
COL9A1-209ENST00000489861 TRIM28Q13263 835 aaKnown RBP9.53□□□□□ -0.88
COL9A1-209ENST00000489861 PPIL2Q13356 520 aa9.53□□□□□ -0.88
COL9A1-209ENST00000489861 IRF5Q13568 498 aa9.53□□□□□ -0.88
COL9A1-209ENST00000489861 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
COL9A1-209ENST00000489861 ZNF70Q9UC06 446 aaPredicted RBP9.53□□□□□ -0.88
COL9A1-209ENST00000489861 MAST2Q6P0Q8 1798 aa9.52□□□□□ -0.88
COL9A1-209ENST00000489861 CYP2C8P10632 490 aa9.52□□□□□ -0.89
COL9A1-209ENST00000489861 TRIM32Q13049 653 aa9.52□□□□□ -0.89
COL9A1-209ENST00000489861 LRRC26Q2I0M4 334 aa9.52□□□□□ -0.89
COL9A1-209ENST00000489861 SPDYE2Q495Y8 402 aa9.52□□□□□ -0.89
COL9A1-209ENST00000489861 TDRD3Q9H7E2 651 aaKnown RBP9.52□□□□□ -0.89
COL9A1-209ENST00000489861 BSDC1Q9NW68 430 aaPredicted RBP9.52□□□□□ -0.89
COL9A1-209ENST00000489861 TSPYL4Q9UJ04 414 aa9.52□□□□□ -0.89
COL9A1-209ENST00000489861 TAOK2Q9UL54 1235 aa9.52□□□□□ -0.89
COL9A1-209ENST00000489861 PTPRFP10586 1907 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 TCP10L2B9ZVM9 353 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 PDE8AO60658 829 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 COL6A1P12109 1028 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 RBM5P52756 815 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL9A1-209ENST00000489861 TNFAIP1Q13829 316 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 SHHQ15465 462 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 C9orf50Q5SZB4 431 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 ASB2Q96Q27 587 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 WRNIP1Q96S55 665 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 UHRF1Q96T88 793 aaPredicted RBP9.51□□□□□ -0.89
COL9A1-209ENST00000489861 LRFN3Q9BTN0 628 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 C1QTNF1Q9BXJ1 281 aa9.51□□□□□ -0.89
COL9A1-209ENST00000489861 CD209Q9NNX6 404 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms