RNA–Protein interactions for RNA: ENST00000489713.5

TMTC4-210, Transcript of transmembrane and tetratricopeptide repeat containing 4, human

TSL 2

Gene TMTC4, Length 2,733 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMTC4-210	ENST00000489713	PTPDC1	A2A3K4	754 aa		13.75	□□□□□ -0.21
TMTC4-210	ENST00000489713	TDO2	P48775	406 aa		13.75	□□□□□ -0.21
TMTC4-210	ENST00000489713	MAP3K12	Q12852	859 aa		13.75	□□□□□ -0.21
TMTC4-210	ENST00000489713	TPTE2	Q6XPS3	522 aa		13.75	□□□□□ -0.21
TMTC4-210	ENST00000489713	AIFM3	Q96NN9	605 aa		13.75	□□□□□ -0.21
TMTC4-210	ENST00000489713	NEDD4	P46934	1319 aa		13.75	□□□□□ -0.21
TMTC4-210	ENST00000489713	SPATA31A6	Q5VVP1	1343 aa		13.75	□□□□□ -0.21
TMTC4-210	ENST00000489713	GOLGA8B	A8MQT2	603 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	CAMK4	Q16566	473 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	TSGA10IP	Q3SY00	556 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	OLFM4	Q6UX06	510 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	CLEC4G	Q6UXB4	293 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	MICU3	Q86XE3	530 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	STRBP	Q96SI9	672 aa	Known RBP	13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	NAPB	Q9H115	298 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	RBSN	Q9H1K0	784 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	TCRBV5S4A2T	A0A5A2	114 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	ZFY	P08048	801 aa	Predicted RBP	13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	UQCRFS1P1	P0C7P4	283 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	PDIA3	P30101	505 aa	Known RBP	13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	EXOSC10	Q01780	885 aa	Known RBP	13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	MSL1	Q68DK7	614 aa		13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
TMTC4-210	ENST00000489713	ANKRD36C	Q5JPF3	1778 aa		13.73	□□□□□ -0.21
TMTC4-210	ENST00000489713	L1TD1	Q5T7N2	865 aa	Known RBP	13.73	□□□□□ -0.21
TMTC4-210	ENST00000489713	FAM84B	Q96KN1	310 aa	Predicted RBP	13.73	□□□□□ -0.21
TMTC4-210	ENST00000489713	AKAP11	Q9UKA4	1901 aa		13.73	□□□□□ -0.21
TMTC4-210	ENST00000489713	PRDX5	P30044	214 aa		13.73	□□□□□ -0.21
TMTC4-210	ENST00000489713	TTF1	Q15361	905 aa	Predicted RBP	13.73	□□□□□ -0.21
TMTC4-210	ENST00000489713	CNTNAP4	Q9C0A0	1308 aa		13.73	□□□□□ -0.21
TMTC4-210	ENST00000489713	ADD1	P35611	737 aa	Known RBP	13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	TTC6	Q86TZ1	520 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	IFNL3	Q8IZI9	196 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	NSUN7	Q8NE18	718 aa	Known RBP	13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	PHKB	Q93100	1093 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	TRDN	Q13061	729 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	GIMAP6	Q6P9H5	292 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	NFXL1	Q6ZNB6	911 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	CNBD1	Q8NA66	436 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	NCOA7	Q8NI08	942 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	BTAF1	O14981	1849 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	NWD2	Q9ULI1	1742 aa		13.72	□□□□□ -0.21
TMTC4-210	ENST00000489713	POLR3D	P05423	398 aa	Predicted RBP	13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	PLCB2	Q00722	1185 aa		13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	CAVIN4	Q5BKX8	364 aa		13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	KRT27	Q7Z3Y8	459 aa		13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	BSDC1	Q9NW68	430 aa	Predicted RBP	13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	CTNNA3	Q9UI47	895 aa		13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	MRE11	P49959	708 aa		13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	ZSCAN25	Q6NSZ9	544 aa		13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	MTMR7	Q9Y216	660 aa		13.71	□□□□□ -0.21
TMTC4-210	ENST00000489713	GSG1L2	A8MUP6	293 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	MCM5	P33992	734 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	NASP	P49321	788 aa	Predicted RBP	13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	SF3B3	Q15393	1217 aa	Known RBP	13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	RFX7	Q2KHR2	1363 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	hCG_1642624	A0A1W2PR95	340 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	UBE3C	Q15386	1083 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	GRIK5	Q16478	980 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	PROM2	Q8N271	834 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	ZNF384	Q8TF68	577 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	PIBF1	Q8WXW3	757 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	FBXW7	Q969H0	707 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	PKNOX2	Q96KN3	472 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	COL1A1	P02452	1464 aa	Predicted RBP	13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713		A0A087WWV3	80 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	CPLX1	O14810	134 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	ZSWIM5	Q9P217	1185 aa		13.7	□□□□□ -0.22
TMTC4-210	ENST00000489713	DDX60	Q8IY21	1712 aa	Known RBP	13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	PFKFB2	O60825	505 aa		13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	TM4SF1	P30408	202 aa		13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	ERCC4	Q92889	916 aa	Predicted RBP	13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	HMGB1	P09429	215 aa	Known RBP	13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	FDPS	P14324	419 aa	Known RBP	13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	LIG1	P18858	919 aa		13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	DIXDC1	Q155Q3	683 aa		13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	PRR5L	Q6MZQ0	368 aa		13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	CKAP2L	Q8IYA6	745 aa		13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	FBXO41	Q8TF61	875 aa		13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	NUP133	Q8WUM0	1156 aa		13.69	□□□□□ -0.22
TMTC4-210	ENST00000489713	GYS1	P13807	737 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	NYX	Q9GZU5	481 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	HPS5	Q9UPZ3	1129 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	CARMIL3	Q8ND23	1372 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	LAMA4	Q16363	1823 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	PATL2	C9JE40	543 aa	Known RBP	13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	IFIT3	O14879	490 aa	Known RBP	13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	RIMBP2	O15034	1052 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	CDC27	P30260	824 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	HIBADH	P31937	336 aa	Known RBP	13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	TMEM67	Q5HYA8	995 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	NAA16	Q6N069	864 aa	Predicted RBP	13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	SPATA32	Q96LK8	384 aa		13.68	□□□□□ -0.22
TMTC4-210	ENST00000489713	ZNF804B	A4D1E1	1349 aa		13.67	□□□□□ -0.22
TMTC4-210	ENST00000489713	MAGEB6P1	A0A0J9YX57	407 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms