RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 DZIP1LQ8IYY4 767 aaKnown RBP20.64■□□□□ 0.89
USP48-210ENST00000489108 LINS1Q8NG48 757 aa20.64■□□□□ 0.89
USP48-210ENST00000489108 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.64■□□□□ 0.89
USP48-210ENST00000489108 DNAAF4Q8WXU2 420 aa20.64■□□□□ 0.89
USP48-210ENST00000489108 SERPINA10Q9UK55 444 aa20.64■□□□□ 0.89
USP48-210ENST00000489108 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.89
USP48-210ENST00000489108 CSADQ9Y600 493 aa20.64■□□□□ 0.89
USP48-210ENST00000489108 TLR2O60603 784 aa20.63■□□□□ 0.89
USP48-210ENST00000489108 FLIIQ13045 1269 aa20.63■□□□□ 0.89
USP48-210ENST00000489108 KIF22Q14807 665 aa20.63■□□□□ 0.89
USP48-210ENST00000489108 MFSD14BQ5SR56 506 aa20.63■□□□□ 0.89
USP48-210ENST00000489108 ZNF594Q96JF6 807 aaPredicted RBP20.63■□□□□ 0.89
USP48-210ENST00000489108 ECM2O94769 699 aaPredicted RBP20.62■□□□□ 0.89
USP48-210ENST00000489108 LACTBP83111 547 aaPredicted RBP20.62■□□□□ 0.89
USP48-210ENST00000489108 FKBP5Q13451 457 aaPredicted RBP20.62■□□□□ 0.89
USP48-210ENST00000489108 TDRD7Q8NHU6 1098 aaKnown RBP20.62■□□□□ 0.89
USP48-210ENST00000489108 DPF3Q92784 378 aa20.62■□□□□ 0.89
USP48-210ENST00000489108 RBM27Q9P2N5 1060 aaKnown RBP20.62■□□□□ 0.89
USP48-210ENST00000489108 WDHD1O75717 1129 aaPredicted RBP20.61■□□□□ 0.89
USP48-210ENST00000489108 MTFR1Q15390 333 aa20.61■□□□□ 0.89
USP48-210ENST00000489108 LDHAL6AQ6ZMR3 332 aa20.61■□□□□ 0.89
USP48-210ENST00000489108 SPDYE5A6NIY4 337 aa20.6■□□□□ 0.89
USP48-210ENST00000489108 BTBD19C9JJ37 291 aa20.6■□□□□ 0.89
USP48-210ENST00000489108 CETPP11597 493 aa20.6■□□□□ 0.89
USP48-210ENST00000489108 CRKP46108 304 aa20.6■□□□□ 0.89
USP48-210ENST00000489108 GYG1P46976 350 aa20.6■□□□□ 0.89
USP48-210ENST00000489108 TNNI2P48788 182 aa20.6■□□□□ 0.89
USP48-210ENST00000489108 LMBR1LQ6UX01 489 aa20.6■□□□□ 0.89
USP48-210ENST00000489108 GNRH1P01148 92 aa20.59■□□□□ 0.89
USP48-210ENST00000489108 HIBADHP31937 336 aaKnown RBP20.59■□□□□ 0.89
USP48-210ENST00000489108 EPHA10Q5JZY3 1008 aa20.59■□□□□ 0.89
USP48-210ENST00000489108 SHISA4Q96DD7 197 aa20.59■□□□□ 0.89
USP48-210ENST00000489108 CNNM1Q9NRU3 951 aa20.59■□□□□ 0.89
USP48-210ENST00000489108 SNCAIPQ9Y6H5 919 aa20.59■□□□□ 0.89
USP48-210ENST00000489108 PRMT2P55345 433 aa20.58■□□□□ 0.89
USP48-210ENST00000489108 GRIK5Q16478 980 aa20.58■□□□□ 0.89
USP48-210ENST00000489108 CCDC57Q2TAC2 916 aa20.58■□□□□ 0.89
USP48-210ENST00000489108 TAF7LQ5H9L4 462 aa20.58■□□□□ 0.89
USP48-210ENST00000489108 ERO1BQ86YB8 467 aa20.58■□□□□ 0.89
USP48-210ENST00000489108 ZKSCAN4Q969J2 545 aaPredicted RBP20.58■□□□□ 0.89
USP48-210ENST00000489108 FAM84BQ96KN1 310 aaPredicted RBP20.58■□□□□ 0.89
USP48-210ENST00000489108 ZCCHC17Q9NP64 241 aaKnown RBP20.58■□□□□ 0.89
USP48-210ENST00000489108 ARAP2Q8WZ64 1704 aa20.58■□□□□ 0.88
USP48-210ENST00000489108 IRF6O14896 467 aa20.57■□□□□ 0.88
USP48-210ENST00000489108 CTGFP29279 349 aa20.57■□□□□ 0.88
USP48-210ENST00000489108 CACNB3P54284 484 aa20.56■□□□□ 0.88
USP48-210ENST00000489108 SNAPC2Q13487 334 aa20.56■□□□□ 0.88
USP48-210ENST00000489108 UBE4AQ14139 1066 aa20.56■□□□□ 0.88
USP48-210ENST00000489108 C17orf99Q6UX52 265 aa20.56■□□□□ 0.88
USP48-210ENST00000489108 WRNIP1Q96S55 665 aa20.56■□□□□ 0.88
USP48-210ENST00000489108 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
USP48-210ENST00000489108 F6X3S4 739 aa20.55■□□□□ 0.88
USP48-210ENST00000489108 PSMC4P43686 418 aa20.55■□□□□ 0.88
USP48-210ENST00000489108 SRRDQ9UH36 339 aa20.55■□□□□ 0.88
USP48-210ENST00000489108 CPA4Q9UI42 421 aa20.55■□□□□ 0.88
USP48-210ENST00000489108 RANBP2P49792 3224 aaKnown RBP20.54■□□□□ 0.88
USP48-210ENST00000489108 DLL1O00548 723 aa20.54■□□□□ 0.88
USP48-210ENST00000489108 PPIL2Q13356 520 aa20.54■□□□□ 0.88
USP48-210ENST00000489108 BEND3Q5T5X7 828 aa20.54■□□□□ 0.88
USP48-210ENST00000489108 TRIM47Q96LD4 638 aa20.54■□□□□ 0.88
USP48-210ENST00000489108 IQSEC3Q9UPP2 1182 aaPredicted RBP20.54■□□□□ 0.88
USP48-210ENST00000489108 CACNA1FO60840 1977 aa20.54■□□□□ 0.88
USP48-210ENST00000489108 GRK4P32298 578 aa20.53■□□□□ 0.88
USP48-210ENST00000489108 UBE2Q1Q7Z7E8 422 aa20.53■□□□□ 0.88
USP48-210ENST00000489108 WWC1Q8IX03 1113 aa20.53■□□□□ 0.88
USP48-210ENST00000489108 SLC17A8Q8NDX2 589 aa20.53■□□□□ 0.88
USP48-210ENST00000489108 NKX2-3Q8TAU0 364 aa20.53■□□□□ 0.88
USP48-210ENST00000489108 PUS3Q9BZE2 481 aaKnown RBP20.53■□□□□ 0.88
USP48-210ENST00000489108 CCL5P13501 91 aa20.52■□□□□ 0.88
USP48-210ENST00000489108 OSBPP22059 807 aa20.52■□□□□ 0.88
USP48-210ENST00000489108 HOXD10P28358 340 aa20.52■□□□□ 0.88
USP48-210ENST00000489108 GJA8P48165 433 aa20.52■□□□□ 0.88
USP48-210ENST00000489108 HDLBPQ00341 1268 aaKnown RBP20.52■□□□□ 0.88
USP48-210ENST00000489108 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
USP48-210ENST00000489108 RAET1EQ8TD07 263 aa20.52■□□□□ 0.88
USP48-210ENST00000489108 PRO3102Q9H379 93 aa20.52■□□□□ 0.88
USP48-210ENST00000489108 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.88
USP48-210ENST00000489108 FMNL1O95466 1100 aaPredicted RBP20.51■□□□□ 0.87
USP48-210ENST00000489108 GJB1P08034 283 aa20.51■□□□□ 0.87
USP48-210ENST00000489108 FBXO33Q7Z6M2 555 aa20.51■□□□□ 0.87
USP48-210ENST00000489108 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.51■□□□□ 0.87
USP48-210ENST00000489108 TEKT1Q969V4 418 aa20.51■□□□□ 0.87
USP48-210ENST00000489108 HTATIP2Q9BUP3 242 aa20.51■□□□□ 0.87
USP48-210ENST00000489108 GRM8O00222 908 aa20.5■□□□□ 0.87
USP48-210ENST00000489108 PDHXO00330 501 aa20.5■□□□□ 0.87
USP48-210ENST00000489108 VAMP4O75379 141 aa20.5■□□□□ 0.87
USP48-210ENST00000489108 PPATQ06203 517 aa20.5■□□□□ 0.87
USP48-210ENST00000489108 CCDC27Q2M243 656 aa20.5■□□□□ 0.87
USP48-210ENST00000489108 MIGA2Q7L4E1 593 aa20.5■□□□□ 0.87
USP48-210ENST00000489108 FAM83AQ86UY5 434 aa20.5■□□□□ 0.87
USP48-210ENST00000489108 RNF208Q9H0X6 261 aa20.5■□□□□ 0.87
USP48-210ENST00000489108 BIN2Q9UBW5 565 aaPredicted RBP20.5■□□□□ 0.87
USP48-210ENST00000489108 INPP5BP32019 993 aa20.49■□□□□ 0.87
USP48-210ENST00000489108 ANKRD23Q86SG2 305 aa20.49■□□□□ 0.87
USP48-210ENST00000489108 VPS37DQ86XT2 251 aa20.49■□□□□ 0.87
USP48-210ENST00000489108 HOOK2Q96ED9 719 aa20.49■□□□□ 0.87
USP48-210ENST00000489108 TMOD2Q9NZR1 351 aa20.49■□□□□ 0.87
USP48-210ENST00000489108 NR2E3Q9Y5X4 410 aa20.49■□□□□ 0.87
USP48-210ENST00000489108 MYPNQ86TC9 1320 aa20.49■□□□□ 0.87
USP48-210ENST00000489108 FRAT2O75474 233 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms