RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 HPS5Q9UPZ3 1129 aa19.22■□□□□ 0.67
TRIM50-203ENST00000488217 SOX10P56693 466 aa19.21■□□□□ 0.67
TRIM50-203ENST00000488217 CHAF1AQ13111 956 aaPredicted RBP19.21■□□□□ 0.67
TRIM50-203ENST00000488217 GRIK5Q16478 980 aa19.21■□□□□ 0.67
TRIM50-203ENST00000488217 TCP10L2B9ZVM9 353 aa19.2■□□□□ 0.66
TRIM50-203ENST00000488217 TRMT2AQ8IZ69 625 aaKnown RBP19.2■□□□□ 0.66
TRIM50-203ENST00000488217 SPEF2Q9C093 1822 aa19.2■□□□□ 0.66
TRIM50-203ENST00000488217 IFIT1P09914 478 aaKnown RBP19.19■□□□□ 0.66
TRIM50-203ENST00000488217 TNNI2P48788 182 aa19.19■□□□□ 0.66
TRIM50-203ENST00000488217 OTUD7BQ6GQQ9 843 aa19.19■□□□□ 0.66
TRIM50-203ENST00000488217 TEPSINQ96N21 525 aa19.19■□□□□ 0.66
TRIM50-203ENST00000488217 EYA2O00167 538 aa19.18■□□□□ 0.66
TRIM50-203ENST00000488217 FGFR2P21802 821 aa19.18■□□□□ 0.66
TRIM50-203ENST00000488217 RFX5P48382 616 aaPredicted RBP19.18■□□□□ 0.66
TRIM50-203ENST00000488217 MAP3K9P80192 1104 aa19.18■□□□□ 0.66
TRIM50-203ENST00000488217 PUM3Q15397 648 aaKnown RBP19.18■□□□□ 0.66
TRIM50-203ENST00000488217 FBXO46Q6PJ61 603 aaPredicted RBP19.18■□□□□ 0.66
TRIM50-203ENST00000488217 TEKT1Q969V4 418 aa19.18■□□□□ 0.66
TRIM50-203ENST00000488217 SMC4Q9NTJ3 1288 aa19.18■□□□□ 0.66
TRIM50-203ENST00000488217 TESPA1A2RU30 521 aaPredicted RBP19.17■□□□□ 0.66
TRIM50-203ENST00000488217 IGF2BP3O00425 579 aaKnown RBP eCLIP19.17■□□□□ 0.66
TRIM50-203ENST00000488217 GJA5P36382 358 aa19.17■□□□□ 0.66
TRIM50-203ENST00000488217 TMEM39BQ9GZU3 492 aa19.17■□□□□ 0.66
TRIM50-203ENST00000488217 SUGT1Q9Y2Z0 365 aa19.17■□□□□ 0.66
TRIM50-203ENST00000488217 SSC5DA1L4H1 1573 aa19.16■□□□□ 0.66
TRIM50-203ENST00000488217 CT47B1P0C2W7 299 aaPredicted RBP19.16■□□□□ 0.66
TRIM50-203ENST00000488217 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.16■□□□□ 0.66
TRIM50-203ENST00000488217 CDAN1Q8IWY9 1227 aa19.16■□□□□ 0.66
TRIM50-203ENST00000488217 LPIN2Q92539 896 aa19.16■□□□□ 0.66
TRIM50-203ENST00000488217 ZDHHC15Q96MV8 337 aa19.16■□□□□ 0.66
TRIM50-203ENST00000488217 PTPN18Q99952 460 aa19.16■□□□□ 0.66
TRIM50-203ENST00000488217 ELP3Q9H9T3 547 aa19.16■□□□□ 0.66
TRIM50-203ENST00000488217 NOB1Q9ULX3 412 aaKnown RBP19.16■□□□□ 0.66
TRIM50-203ENST00000488217 ZNF646O15015 1829 aaPredicted RBP19.16■□□□□ 0.66
TRIM50-203ENST00000488217 APOBEC3HQ6NTF7 200 aaKnown RBP19.15■□□□□ 0.66
TRIM50-203ENST00000488217 ATG9AQ7Z3C6 839 aa19.15■□□□□ 0.66
TRIM50-203ENST00000488217 OPTNQ96CV9 577 aa19.15■□□□□ 0.66
TRIM50-203ENST00000488217 KIF16BQ96L93 1317 aa19.15■□□□□ 0.66
TRIM50-203ENST00000488217 AKAP11Q9UKA4 1901 aa19.14■□□□□ 0.65
TRIM50-203ENST00000488217 SLC5A1P13866 664 aa19.14■□□□□ 0.65
TRIM50-203ENST00000488217 HHIPL2Q6UWX4 724 aa19.14■□□□□ 0.65
TRIM50-203ENST00000488217 WDR66Q8TBY9 1149 aa19.14■□□□□ 0.65
TRIM50-203ENST00000488217 MS4A4AQ96JQ5 239 aa19.14■□□□□ 0.65
TRIM50-203ENST00000488217 FBXO3Q9UK99 471 aa19.14■□□□□ 0.65
TRIM50-203ENST00000488217 HDAC5Q9UQL6 1122 aa19.14■□□□□ 0.65
TRIM50-203ENST00000488217 UBTFL1P0CB47 393 aaPredicted RBP19.13■□□□□ 0.65
TRIM50-203ENST00000488217 CACNB3P54284 484 aa19.13■□□□□ 0.65
TRIM50-203ENST00000488217 FKBP1CQ5VVH2 108 aa19.13■□□□□ 0.65
TRIM50-203ENST00000488217 FAM83AQ86UY5 434 aa19.13■□□□□ 0.65
TRIM50-203ENST00000488217 CEP126Q9P2H0 1117 aa19.13■□□□□ 0.65
TRIM50-203ENST00000488217 CRHR2Q13324 411 aa19.12■□□□□ 0.65
TRIM50-203ENST00000488217 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRIM50-203ENST00000488217 API5Q9BZZ5 524 aaKnown RBP19.12■□□□□ 0.65
TRIM50-203ENST00000488217 TMOD2Q9NZR1 351 aa19.12■□□□□ 0.65
TRIM50-203ENST00000488217 TRIM17Q9Y577 477 aa19.12■□□□□ 0.65
TRIM50-203ENST00000488217 CSADQ9Y600 493 aa19.12■□□□□ 0.65
TRIM50-203ENST00000488217 MAST3O60307 1309 aa19.11■□□□□ 0.65
TRIM50-203ENST00000488217 CIAO1O76071 339 aa19.11■□□□□ 0.65
TRIM50-203ENST00000488217 GTF2A2P52657 109 aa19.11■□□□□ 0.65
TRIM50-203ENST00000488217 VGLL4Q14135 290 aa19.11■□□□□ 0.65
TRIM50-203ENST00000488217 CNKSR2Q8WXI2 1034 aa19.11■□□□□ 0.65
TRIM50-203ENST00000488217 HOOK2Q96ED9 719 aa19.11■□□□□ 0.65
TRIM50-203ENST00000488217 ERO1AQ96HE7 468 aa19.11■□□□□ 0.65
TRIM50-203ENST00000488217 GNL3LQ9NVN8 582 aaKnown RBP19.11■□□□□ 0.65
TRIM50-203ENST00000488217 SP3Q02447 781 aa19.1■□□□□ 0.65
TRIM50-203ENST00000488217 OTOP1Q7RTM1 612 aa19.1■□□□□ 0.65
TRIM50-203ENST00000488217 SIL1Q9H173 461 aa19.1■□□□□ 0.65
TRIM50-203ENST00000488217 IL15P40933 162 aaPredicted RBP19.09■□□□□ 0.65
TRIM50-203ENST00000488217 BRI3BPQ8WY22 251 aa19.09■□□□□ 0.65
TRIM50-203ENST00000488217 CCL15-CCL14A0A0B4J2E2 113 aa19.08■□□□□ 0.64
TRIM50-203ENST00000488217 CCER2I3L3R5 266 aa19.08■□□□□ 0.64
TRIM50-203ENST00000488217 CCL15Q16663 113 aa19.08■□□□□ 0.64
TRIM50-203ENST00000488217 ATP2B3Q16720 1220 aa19.08■□□□□ 0.64
TRIM50-203ENST00000488217 ZKSCAN4Q969J2 545 aaPredicted RBP19.08■□□□□ 0.64
TRIM50-203ENST00000488217 ZFYVE28Q9HCC9 887 aa19.08■□□□□ 0.64
TRIM50-203ENST00000488217 PTPN22Q9Y2R2 807 aa19.08■□□□□ 0.64
TRIM50-203ENST00000488217 LRRFIP2Q9Y608 721 aaKnown RBP19.08■□□□□ 0.64
TRIM50-203ENST00000488217 SPDYE5A6NIY4 337 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
TRIM50-203ENST00000488217 INTS3Q68E01 1043 aaKnown RBP19.07■□□□□ 0.64
TRIM50-203ENST00000488217 MIGA2Q7L4E1 593 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 ERO1BQ86YB8 467 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 CD99L2Q8TCZ2 262 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 FAM151AQ8WW52 585 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 ARHGAP45Q92619 1136 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 OTUD5Q96G74 571 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 EFCC1Q9HA90 598 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 COPRSQ9NQ92 184 aa19.07■□□□□ 0.64
TRIM50-203ENST00000488217 DCAF15Q66K64 600 aa19.06■□□□□ 0.64
TRIM50-203ENST00000488217 CDC42EP5Q6NZY7 148 aa19.06■□□□□ 0.64
TRIM50-203ENST00000488217 WRNIP1Q96S55 665 aa19.06■□□□□ 0.64
TRIM50-203ENST00000488217 DENND2AQ9ULE3 1009 aa19.06■□□□□ 0.64
TRIM50-203ENST00000488217 PA2G4Q9UQ80 394 aaKnown RBP19.06■□□□□ 0.64
TRIM50-203ENST00000488217 TNRC18O15417 2968 aaPredicted RBP19.05■□□□□ 0.64
TRIM50-203ENST00000488217 LDHBP07195 334 aaKnown RBP19.05■□□□□ 0.64
TRIM50-203ENST00000488217 CETPP11597 493 aa19.05■□□□□ 0.64
TRIM50-203ENST00000488217 ARHGEF6Q15052 776 aa19.05■□□□□ 0.64
TRIM50-203ENST00000488217 DIXDC1Q155Q3 683 aa19.05■□□□□ 0.64
TRIM50-203ENST00000488217 FAM43AQ8N2R8 423 aa19.05■□□□□ 0.64
TRIM50-203ENST00000488217 ZNF341Q9BYN7 854 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms