RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 C6orf229H3BNL8 230 aa16.22■□□□□ 0.19
COPS7B-221ENST00000488111 BRD1O95696 1058 aa16.22■□□□□ 0.19
COPS7B-221ENST00000488111 NMIQ13287 307 aaPredicted RBP16.22■□□□□ 0.19
COPS7B-221ENST00000488111 TSC1Q92574 1164 aa16.22■□□□□ 0.19
COPS7B-221ENST00000488111 SYAP1Q96A49 352 aaPredicted RBP16.22■□□□□ 0.19
COPS7B-221ENST00000488111 A0A1B0GUL6 1792 aa16.22■□□□□ 0.19
COPS7B-221ENST00000488111 HIBADHP31937 336 aaKnown RBP16.21■□□□□ 0.19
COPS7B-221ENST00000488111 CBX1P83916 185 aa16.21■□□□□ 0.19
COPS7B-221ENST00000488111 TMC4Q7Z404 712 aa16.21■□□□□ 0.19
COPS7B-221ENST00000488111 FBXO33Q7Z6M2 555 aa16.21■□□□□ 0.19
COPS7B-221ENST00000488111 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
COPS7B-221ENST00000488111 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
COPS7B-221ENST00000488111 ATP2B4P23634 1241 aa16.21■□□□□ 0.19
COPS7B-221ENST00000488111 FAM184AQ8NB25 1140 aa16.21■□□□□ 0.19
COPS7B-221ENST00000488111 PIH1D3Q9NQM4 214 aaKnown RBP16.21■□□□□ 0.19
COPS7B-221ENST00000488111 KIF3AQ9Y496 699 aa16.21■□□□□ 0.19
COPS7B-221ENST00000488111 A0A0D9SFI3 127 aa16.2■□□□□ 0.18
COPS7B-221ENST00000488111 PPP4R3BQ5MIZ7 849 aa16.2■□□□□ 0.18
COPS7B-221ENST00000488111 MPNDQ8N594 471 aa16.2■□□□□ 0.18
COPS7B-221ENST00000488111 GNL3LQ9NVN8 582 aaKnown RBP16.2■□□□□ 0.18
COPS7B-221ENST00000488111 JAG2Q9Y219 1238 aa16.2■□□□□ 0.18
COPS7B-221ENST00000488111 IRS2Q9Y4H2 1338 aa16.2■□□□□ 0.18
COPS7B-221ENST00000488111 KCNA3P22001 575 aa16.2■□□□□ 0.18
COPS7B-221ENST00000488111 SEC62Q99442 399 aaKnown RBP16.2■□□□□ 0.18
COPS7B-221ENST00000488111 SGIP1Q9BQI5 828 aa16.2■□□□□ 0.18
COPS7B-221ENST00000488111 TMX4Q9H1E5 349 aaPredicted RBP16.2■□□□□ 0.18
COPS7B-221ENST00000488111 ANO2Q9NQ90 1003 aa16.2■□□□□ 0.18
COPS7B-221ENST00000488111 RIMBP2O15034 1052 aa16.19■□□□□ 0.18
COPS7B-221ENST00000488111 SGSM2O43147 1006 aa16.19■□□□□ 0.18
COPS7B-221ENST00000488111 PTGER2P43116 358 aa16.19■□□□□ 0.18
COPS7B-221ENST00000488111 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
COPS7B-221ENST00000488111 ARAP2Q8WZ64 1704 aa16.19■□□□□ 0.18
COPS7B-221ENST00000488111 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
COPS7B-221ENST00000488111 HIP1O00291 1037 aa16.18■□□□□ 0.18
COPS7B-221ENST00000488111 C21orf2O43822 256 aa16.18■□□□□ 0.18
COPS7B-221ENST00000488111 REC8O95072 547 aa16.18■□□□□ 0.18
COPS7B-221ENST00000488111 CHAF1AQ13111 956 aaPredicted RBP16.18■□□□□ 0.18
COPS7B-221ENST00000488111 RUFY2Q8WXA3 655 aa16.18■□□□□ 0.18
COPS7B-221ENST00000488111 CUL4AQ13619 759 aa16.17■□□□□ 0.18
COPS7B-221ENST00000488111 CCDC129Q6ZRS4 1044 aa16.17■□□□□ 0.18
COPS7B-221ENST00000488111 TTLL6Q8N841 843 aa16.17■□□□□ 0.18
COPS7B-221ENST00000488111 ABCF2Q9UG63 623 aa16.17■□□□□ 0.18
COPS7B-221ENST00000488111 COL1A1P02452 1464 aaPredicted RBP16.17■□□□□ 0.18
COPS7B-221ENST00000488111 SLX4Q8IY92 1834 aa16.16■□□□□ 0.18
COPS7B-221ENST00000488111 RNF113AO15541 343 aaKnown RBP16.16■□□□□ 0.18
COPS7B-221ENST00000488111 TTF1Q15361 905 aaPredicted RBP16.16■□□□□ 0.18
COPS7B-221ENST00000488111 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
COPS7B-221ENST00000488111 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
COPS7B-221ENST00000488111 TMX3Q96JJ7 454 aa16.16■□□□□ 0.18
COPS7B-221ENST00000488111 ZNF830Q96NB3 372 aaPredicted RBP16.16■□□□□ 0.18
COPS7B-221ENST00000488111 AKAP11Q9UKA4 1901 aa16.16■□□□□ 0.18
COPS7B-221ENST00000488111 CACNA1SQ13698 1873 aa16.16■□□□□ 0.18
COPS7B-221ENST00000488111 WASHC4Q2M389 1173 aa16.16■□□□□ 0.18
COPS7B-221ENST00000488111 DENND2AQ9ULE3 1009 aa16.16■□□□□ 0.18
COPS7B-221ENST00000488111 MCM2P49736 904 aa16.15■□□□□ 0.18
COPS7B-221ENST00000488111 SLC9C2Q5TAH2 1124 aa16.15■□□□□ 0.18
COPS7B-221ENST00000488111 FOXD4L5Q5VV16 416 aaPredicted RBP16.15■□□□□ 0.18
COPS7B-221ENST00000488111 ZNF804AQ7Z570 1209 aa16.15■□□□□ 0.18
COPS7B-221ENST00000488111 FOXD4L4Q8WXT5 416 aaPredicted RBP16.15■□□□□ 0.18
COPS7B-221ENST00000488111 TGFB2P61812 414 aa16.15■□□□□ 0.18
COPS7B-221ENST00000488111 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
COPS7B-221ENST00000488111 PDCL2Q8N4E4 241 aa16.15■□□□□ 0.18
COPS7B-221ENST00000488111 ANKRD7Q92527 254 aa16.15■□□□□ 0.18
COPS7B-221ENST00000488111 TTC12Q9H892 705 aaPredicted RBP16.15■□□□□ 0.18
COPS7B-221ENST00000488111 CD209Q9NNX6 404 aa16.15■□□□□ 0.18
COPS7B-221ENST00000488111 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
COPS7B-221ENST00000488111 PTH1RQ03431 593 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 OSBP2Q969R2 916 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 ZC3H12CQ9C0D7 883 aaKnown RBP16.14■□□□□ 0.17
COPS7B-221ENST00000488111 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.17
COPS7B-221ENST00000488111 USP25Q9UHP3 1055 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 LRRC37AA6NMS7 1700 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 ADCY5O95622 1261 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 DOK7Q18PE1 504 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 MCMDC2Q4G0Z9 681 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 ZMYM1Q5SVZ6 1142 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 TDRD7Q8NHU6 1098 aaKnown RBP16.14■□□□□ 0.17
COPS7B-221ENST00000488111 INTS4Q96HW7 963 aaKnown RBP16.14■□□□□ 0.17
COPS7B-221ENST00000488111 LSG1Q9H089 658 aaKnown RBP16.14■□□□□ 0.17
COPS7B-221ENST00000488111 PIM2Q9P1W9 311 aa16.14■□□□□ 0.17
COPS7B-221ENST00000488111 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 C17orf53Q8N3J3 647 aaPredicted RBP16.13■□□□□ 0.17
COPS7B-221ENST00000488111 MAGEB6Q8N7X4 407 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 MED23Q9ULK4 1368 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 SRCAPQ6ZRS2 3230 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 ZNF532Q9HCE3 1301 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 M0R2C6 588 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 SEMA3EO15041 775 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 PDE6AP16499 860 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 ADD2P35612 726 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 MAP3K12Q12852 859 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 PUS7LQ9H0K6 701 aaKnown RBP16.13■□□□□ 0.17
COPS7B-221ENST00000488111 SPON1Q9HCB6 807 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 RAI14Q9P0K7 980 aa16.13■□□□□ 0.17
COPS7B-221ENST00000488111 DUOX1Q9NRD9 1551 aa16.12■□□□□ 0.17
COPS7B-221ENST00000488111 LRRFIP1Q32MZ4 808 aaKnown RBP16.12■□□□□ 0.17
COPS7B-221ENST00000488111 MAST3O60307 1309 aa16.12■□□□□ 0.17
COPS7B-221ENST00000488111 GADD45BO75293 160 aaPredicted RBP16.12■□□□□ 0.17
COPS7B-221ENST00000488111 ZFYP08048 801 aaPredicted RBP16.12■□□□□ 0.17
COPS7B-221ENST00000488111 TMEM87AQ8NBN3 555 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms