RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 RBM5P52756 815 aaKnown RBP eCLIP21■□□□□ 0.95
SHROOM1-205ENST00000488072 OGFOD1Q8N543 542 aa21■□□□□ 0.95
SHROOM1-205ENST00000488072 TBC1D22AQ8WUA7 517 aa21■□□□□ 0.95
SHROOM1-205ENST00000488072 LNPKQ9C0E8 428 aa21■□□□□ 0.95
SHROOM1-205ENST00000488072 BOLA2Q9H3K6 86 aa21■□□□□ 0.95
SHROOM1-205ENST00000488072 CLRN2A0PK11 232 aa20.99■□□□□ 0.95
SHROOM1-205ENST00000488072 ADM5C9JUS6 153 aa20.99■□□□□ 0.95
SHROOM1-205ENST00000488072 ANGEL2Q5VTE6 544 aaKnown RBP20.99■□□□□ 0.95
SHROOM1-205ENST00000488072 USP48Q86UV5 1035 aa20.99■□□□□ 0.95
SHROOM1-205ENST00000488072 GGA3Q9NZ52 723 aa20.99■□□□□ 0.95
SHROOM1-205ENST00000488072 HDAC9Q9UKV0 1011 aa20.99■□□□□ 0.95
SHROOM1-205ENST00000488072 ITGBL1O95965 494 aaPredicted RBP20.98■□□□□ 0.95
SHROOM1-205ENST00000488072 C1QTNF8P60827 252 aa20.98■□□□□ 0.95
SHROOM1-205ENST00000488072 PRAMEF18Q5VWM3 479 aa20.98■□□□□ 0.95
SHROOM1-205ENST00000488072 CNTROBQ8N137 903 aa20.98■□□□□ 0.95
SHROOM1-205ENST00000488072 GCC1Q96CN9 775 aa20.98■□□□□ 0.95
SHROOM1-205ENST00000488072 ZNF512BQ96KM6 892 aaPredicted RBP20.98■□□□□ 0.95
SHROOM1-205ENST00000488072 PGAP2Q9UHJ9 254 aa20.98■□□□□ 0.95
SHROOM1-205ENST00000488072 SALL1Q9NSC2 1324 aa20.98■□□□□ 0.95
SHROOM1-205ENST00000488072 CHGBP05060 677 aa20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 LDHBP07195 334 aaKnown RBP20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 CACNB3P54284 484 aa20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 HTRA3P83110 453 aa20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 DLGAP5Q15398 846 aa20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 SLFNL1Q499Z3 407 aa20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 SKAP1Q86WV1 359 aa20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 SMC1BQ8NDV3 1235 aa20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 DNAJC2Q99543 621 aaKnown RBP20.97■□□□□ 0.95
SHROOM1-205ENST00000488072 AKAP11Q9UKA4 1901 aa20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 SPDYE2BA6NHP3 402 aa20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 ZBTB22O15209 634 aa20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 MAP4K4O95819 1239 aaPredicted RBP20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 SPDYE6P0CI01 402 aa20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 MECOMQ03112 1051 aa20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 APOBEC3HQ6NTF7 200 aaKnown RBP20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 TDRD3Q9H7E2 651 aaKnown RBP20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 RAI14Q9P0K7 980 aa20.96■□□□□ 0.95
SHROOM1-205ENST00000488072 DAGLAQ9Y4D2 1042 aa20.95■□□□□ 0.94
SHROOM1-205ENST00000488072 MYH13Q9UKX3 1938 aa20.95■□□□□ 0.94
SHROOM1-205ENST00000488072 PDS5AQ29RF7 1337 aaKnown RBP20.95■□□□□ 0.94
SHROOM1-205ENST00000488072 SALL3Q9BXA9 1300 aa20.95■□□□□ 0.94
SHROOM1-205ENST00000488072 GOLIM4O00461 696 aa20.94■□□□□ 0.94
SHROOM1-205ENST00000488072 ATP5JP18859 108 aa20.94■□□□□ 0.94
SHROOM1-205ENST00000488072 NUCB1Q02818 461 aa20.94■□□□□ 0.94
SHROOM1-205ENST00000488072 ERICH6Q7L0X2 663 aa20.94■□□□□ 0.94
SHROOM1-205ENST00000488072 ADGRA1Q86SQ6 560 aa20.94■□□□□ 0.94
SHROOM1-205ENST00000488072 MTMR14Q8NCE2 650 aa20.94■□□□□ 0.94
SHROOM1-205ENST00000488072 ECHDC1Q9NTX5 307 aa20.94■□□□□ 0.94
SHROOM1-205ENST00000488072 SERPINA10Q9UK55 444 aa20.94■□□□□ 0.94
SHROOM1-205ENST00000488072 PDE4AP27815 886 aa20.93■□□□□ 0.94
SHROOM1-205ENST00000488072 CDAN1Q8IWY9 1227 aa20.93■□□□□ 0.94
SHROOM1-205ENST00000488072 TEKT1Q969V4 418 aa20.93■□□□□ 0.94
SHROOM1-205ENST00000488072 NSUN4Q96CB9 384 aaKnown RBP20.93■□□□□ 0.94
SHROOM1-205ENST00000488072 LRP2BPQ9P2M1 347 aa20.93■□□□□ 0.94
SHROOM1-205ENST00000488072 ZNF70Q9UC06 446 aaPredicted RBP20.93■□□□□ 0.94
SHROOM1-205ENST00000488072 KRT26Q7Z3Y9 468 aa20.92■□□□□ 0.94
SHROOM1-205ENST00000488072 CHD1LQ86WJ1 897 aa20.92■□□□□ 0.94
SHROOM1-205ENST00000488072 DZIP1Q86YF9 867 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-205ENST00000488072 PI4K2BQ8TCG2 481 aa20.92■□□□□ 0.94
SHROOM1-205ENST00000488072 ZC3H15Q8WU90 426 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-205ENST00000488072 VEZTQ9HBM0 779 aa20.92■□□□□ 0.94
SHROOM1-205ENST00000488072 SUGT1Q9Y2Z0 365 aa20.92■□□□□ 0.94
SHROOM1-205ENST00000488072 IDH1O75874 414 aaKnown RBP20.91■□□□□ 0.94
SHROOM1-205ENST00000488072 FSTL1Q12841 308 aa20.91■□□□□ 0.94
SHROOM1-205ENST00000488072 DCPSQ96C86 337 aaKnown RBP20.91■□□□□ 0.94
SHROOM1-205ENST00000488072 ZDHHC15Q96MV8 337 aa20.91■□□□□ 0.94
SHROOM1-205ENST00000488072 PASKQ96RG2 1323 aa20.91■□□□□ 0.94
SHROOM1-205ENST00000488072 HAUS7Q99871 368 aa20.91■□□□□ 0.94
SHROOM1-205ENST00000488072 TCP10L2B9ZVM9 353 aa20.9■□□□□ 0.94
SHROOM1-205ENST00000488072 HDLBPQ00341 1268 aaKnown RBP20.9■□□□□ 0.94
SHROOM1-205ENST00000488072 CDC42EP5Q6NZY7 148 aa20.9■□□□□ 0.94
SHROOM1-205ENST00000488072 HHIPL2Q6UWX4 724 aa20.9■□□□□ 0.94
SHROOM1-205ENST00000488072 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.9■□□□□ 0.94
SHROOM1-205ENST00000488072 ZNF408Q9H9D4 720 aa20.9■□□□□ 0.94
SHROOM1-205ENST00000488072 FZD1Q9UP38 647 aa20.9■□□□□ 0.94
SHROOM1-205ENST00000488072 MYO5AQ9Y4I1 1855 aaKnown RBP20.9■□□□□ 0.94
SHROOM1-205ENST00000488072 NEFLP07196 543 aa20.89■□□□□ 0.93
SHROOM1-205ENST00000488072 MX1P20591 662 aa20.89■□□□□ 0.93
SHROOM1-205ENST00000488072 SPDYE2Q495Y8 402 aa20.89■□□□□ 0.93
SHROOM1-205ENST00000488072 SPTY2D1Q68D10 685 aaPredicted RBP20.89■□□□□ 0.93
SHROOM1-205ENST00000488072 ZGPATQ8N5A5 531 aaKnown RBP20.89■□□□□ 0.93
SHROOM1-205ENST00000488072 PAG1Q9NWQ8 432 aa20.89■□□□□ 0.93
SHROOM1-205ENST00000488072 MROH7-TTC4A0A0A0MT08 1334 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 GAKO14976 1311 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 BTDP43251 543 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 PDE1AP54750 535 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 DYNLL1P63167 89 aaKnown RBP20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 NFIAQ12857 509 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 CST9Q5W186 159 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 CDC37L1Q7L3B6 337 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 ZFPM1Q8IX07 1006 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 MAGEB6Q8N7X4 407 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 MRIQ9BWK5 157 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 USP40Q9NVE5 1235 aa20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 POLR2AP24928 1970 aaKnown RBP20.88■□□□□ 0.93
SHROOM1-205ENST00000488072 MAST3O60307 1309 aa20.87■□□□□ 0.93
SHROOM1-205ENST00000488072 PLEKHM2Q8IWE5 1019 aa20.87■□□□□ 0.93
SHROOM1-205ENST00000488072 SULF1Q8IWU6 871 aa20.87■□□□□ 0.93
SHROOM1-205ENST00000488072 CDCA5Q96FF9 252 aa20.87■□□□□ 0.93
SHROOM1-205ENST00000488072 ZBTB47Q9UFB7 747 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms