RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 SEPT14Q6ZU15 432 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 MRPS27Q92552 414 aaKnown RBP17.26■□□□□ 0.35
PKD1-220ENST00000487932 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 DNAJC25Q9H1X3 360 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 TBC1D31Q96DN5 1066 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 TTC14Q96N46 770 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 SORBS3O60504 671 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 ABL1P00519 1130 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 KRT19P08727 400 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 UFL1O94874 794 aa17.26■□□□□ 0.35
PKD1-220ENST00000487932 RNASE9P60153 205 aaKnown RBP17.26■□□□□ 0.35
PKD1-220ENST00000487932 NMIQ13287 307 aaPredicted RBP17.26■□□□□ 0.35
PKD1-220ENST00000487932 LRRC59Q96AG4 307 aaKnown RBP17.26■□□□□ 0.35
PKD1-220ENST00000487932 NKTRP30414 1462 aaKnown RBP17.25■□□□□ 0.35
PKD1-220ENST00000487932 BICDL2A1A5D9 508 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 RTL1A6NKG5 1358 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 ZNF174Q15697 407 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 STK32BQ9NY57 414 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 SKILP12757 684 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 CCT6AP40227 531 aaKnown RBP17.25■□□□□ 0.35
PKD1-220ENST00000487932 OPA1O60313 960 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 RHOXF2BP0C7M4 288 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 RHOXF2Q9BQY4 288 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 TACC3Q9Y6A5 838 aa17.25■□□□□ 0.35
PKD1-220ENST00000487932 CALML3P27482 149 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 ALDH3A1P30838 453 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 EPB41P11171 864 aaKnown RBP17.24■□□□□ 0.35
PKD1-220ENST00000487932 GPIHBP1Q8IV16 184 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 TEX11Q8IYF3 940 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 RNF169Q8NCN4 708 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 ABCC11Q96J66 1382 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 KRT83P78385 493 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 FAM47CQ5HY64 1035 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 TMX3Q96JJ7 454 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 GRM8O00222 908 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 SPOPO43791 374 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 RRP9O43818 475 aaKnown RBP17.24■□□□□ 0.35
PKD1-220ENST00000487932 CCDC121Q6ZUS5 278 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 USTQ9Y2C2 406 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 M0QZ92 97 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 GNA11P29992 359 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 ZSCAN23Q3MJ62 389 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 CPLX4Q7Z7G2 160 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 CPXCR1Q8N123 301 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 KIFAP3Q92845 792 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 IFT74Q96LB3 600 aa17.24■□□□□ 0.35
PKD1-220ENST00000487932 ZNF569Q5MCW4 686 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 NFATC2IPQ8NCF5 419 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 KRT86O43790 486 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 USH1GQ495M9 461 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 FAM200AQ8TCP9 573 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 CD109Q6YHK3 1445 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 GIPC1O14908 333 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 SMTNP53814 917 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 CEP57Q86XR8 500 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 MEIS3Q99687 375 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 VWA3AA6NCI4 1184 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 CCNT1O60563 726 aaKnown RBP17.23■□□□□ 0.35
PKD1-220ENST00000487932 IL15P40933 162 aaPredicted RBP17.23■□□□□ 0.35
PKD1-220ENST00000487932 SPAG1Q07617 926 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 CCDC24Q8N4L8 307 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 MTRF1LQ9UGC7 380 aaKnown RBP17.23■□□□□ 0.35
PKD1-220ENST00000487932 CTNND2Q9UQB3 1225 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 ITIH3Q06033 890 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 USP48Q86UV5 1035 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 GTF3C6Q969F1 213 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 CACYBPQ9HB71 228 aaKnown RBP17.23■□□□□ 0.35
PKD1-220ENST00000487932 MTUS1Q9ULD2 1270 aa17.23■□□□□ 0.35
PKD1-220ENST00000487932 TRAF5O00463 557 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 TCP10Q12799 353 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 SPDYE16A6NNV3 312 aaPredicted RBP17.22■□□□□ 0.35
PKD1-220ENST00000487932 ERCC3P19447 782 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 CALCOCO2Q13137 446 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 SPDYE2Q495Y8 402 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 SH2D4AQ9H788 454 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 HGSO14964 777 aaPredicted RBP17.22■□□□□ 0.35
PKD1-220ENST00000487932 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
PKD1-220ENST00000487932 ADGRF5Q8IZF2 1346 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 CNGA1P29973 690 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 CCDC171Q6TFL3 1326 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 TNFAIP3P21580 790 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 DNM1Q05193 864 aaKnown RBP17.22■□□□□ 0.35
PKD1-220ENST00000487932 TFCP2Q12800 502 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 NCAPH2Q6IBW4 605 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 ARHGEF10LQ9HCE6 1279 aa17.22■□□□□ 0.35
PKD1-220ENST00000487932 SV2BQ7L1I2 683 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 ARFGAP3Q9NP61 516 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 SPTLC2O15270 562 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 IL2RBP14784 551 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 GNAT2P19087 354 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 SDSP20132 328 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 CLUL1Q15846 466 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 NSMCE1Q8WV22 266 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 IFRD2Q12894 506 aaPredicted RBP17.21■□□□□ 0.35
PKD1-220ENST00000487932 FMNL3Q8IVF7 1028 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 PAXBP1Q9Y5B6 917 aa17.21■□□□□ 0.35
PKD1-220ENST00000487932 DIXDC1Q155Q3 683 aa17.21■□□□□ 0.34
PKD1-220ENST00000487932 CASC4Q6P4E1 433 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms