RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 KCNQ2O43526 872 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 GCP02774 474 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 HIRAP54198 1017 aaPredicted RBP7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 EVA1CP58658 441 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 FIGNL1Q6PIW4 674 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 SLCO4C1Q6ZQN7 724 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 NLRP13Q86W25 1043 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 ABTB2Q8N961 1025 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 GAS2L2Q8NHY3 880 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 FAM200AQ8TCP9 573 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 EDARADDQ8WWZ3 215 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 CCDC97Q96F63 343 aaPredicted RBP7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 C1orf115Q9H7X2 142 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 NOVA2Q9UNW9 492 aaKnown RBP7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 PCDHGC4Q9Y5F7 938 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 OVOS2A0A0G2JMS6 1433 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 OVOS2A0A0J9YW53 1432 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 CRB1P82279 1406 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 OVOS2Q6IE36 1432 aa7.4□□□□□ -1.22
R3HDM1-218ENST00000487294 SLIT3O75094 1523 aa7.39□□□□□ -1.23
R3HDM1-218ENST00000487294 ATXN7O15265 892 aaPredicted RBP7.39□□□□□ -1.23
R3HDM1-218ENST00000487294 YY1P25490 414 aa7.39□□□□□ -1.23
R3HDM1-218ENST00000487294 STAG2Q8N3U4 1231 aa7.39□□□□□ -1.23
R3HDM1-218ENST00000487294 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
R3HDM1-218ENST00000487294 USP35Q9P2H5 1018 aa7.39□□□□□ -1.23
R3HDM1-218ENST00000487294 ZMIZ1Q9ULJ6 1067 aa7.39□□□□□ -1.23
R3HDM1-218ENST00000487294 CHMP3Q9Y3E7 222 aa7.39□□□□□ -1.23
R3HDM1-218ENST00000487294 SBF2Q86WG5 1849 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 CASZ1Q86V15 1759 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 C2CD2LO14523 706 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 BMP4P12644 408 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 FGFR3P22607 806 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 COL8A1P27658 744 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 CTBSQ01459 385 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 ELOAQ14241 798 aaKnown RBP7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 C1orf53Q5VUE5 145 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 PHACTR1Q9C0D0 580 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 COL18A1P39060 1754 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 LRRC37A3O60309 1634 aa7.38□□□□□ -1.23
R3HDM1-218ENST00000487294 USP6P35125 1406 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 PPIP5K1Q6PFW1 1433 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 DCDC2BA2VCK2 349 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 IGFBP4P22692 258 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 TNP2Q05952 138 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 LRRC69Q6ZNQ3 347 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 ALDH16A1Q8IZ83 802 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 RHPN1Q8TCX5 695 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 GPC6Q9Y625 555 aaPredicted RBP7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 UTRNP46939 3433 aa7.37□□□□□ -1.23
R3HDM1-218ENST00000487294 WDR17Q8IZU2 1322 aa7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 GNB5O14775 395 aa7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 KHNYNO15037 678 aaKnown RBP7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 MAPTP10636 758 aaKnown RBP7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 AMPD1P23109 780 aa7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 WEE1P30291 646 aa7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 DDB1Q16531 1140 aa7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 SAMD5Q5TGI4 173 aa7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 CCDC82Q8N4S0 544 aa7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 ABCC6O95255 1503 aa7.36□□□□□ -1.23
R3HDM1-218ENST00000487294 CENPJQ9HC77 1338 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 ATG7O95352 703 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 FAM157BP0CG42 384 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 ARAFP10398 606 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 HOXB4P17483 251 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 GRIN2CQ14957 1233 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 LINC00114Q6XXX2 140 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 ARHGEF25Q86VW2 580 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 STK32AQ8WU08 396 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 PBXIP1Q96AQ6 731 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 CARD10Q9BWT7 1032 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 PPP1R1BQ9UD71 204 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 GGA1Q9UJY5 639 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 WNK3Q9BYP7 1800 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 CPSF1Q10570 1443 aaKnown RBP7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 PIK3C2AO00443 1686 aa7.35□□□□□ -1.23
R3HDM1-218ENST00000487294 EFSO43281 561 aa7.34□□□□□ -1.23
R3HDM1-218ENST00000487294 EPXP11678 715 aa7.34□□□□□ -1.23
R3HDM1-218ENST00000487294 MARCH10Q8NA82 808 aaPredicted RBP7.34□□□□□ -1.23
R3HDM1-218ENST00000487294 ZNF280CQ8ND82 737 aa7.34□□□□□ -1.23
R3HDM1-218ENST00000487294 HSH2DQ96JZ2 352 aa7.34□□□□□ -1.23
R3HDM1-218ENST00000487294 NEUROD4Q9HD90 331 aa7.34□□□□□ -1.23
R3HDM1-218ENST00000487294 NOP53Q9NZM5 478 aaKnown RBP7.34□□□□□ -1.23
R3HDM1-218ENST00000487294 TRPM1Q7Z4N2 1603 aa7.34□□□□□ -1.24
R3HDM1-218ENST00000487294 MAP3K5Q99683 1374 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 QRICH2Q9H0J4 1663 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 CD33P20138 364 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 SWI5Q1ZZU3 235 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 TOM1L2Q6ZVM7 507 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 PTF1AQ7RTS3 328 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 KCNH5Q8NCM2 988 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 SUSD3Q96L08 255 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 CCDC7Q96M83 1385 aa7.33□□□□□ -1.24
R3HDM1-218ENST00000487294 NFAT5O94916 1531 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 TTC21AQ8NDW8 1320 aa7.32□□□□□ -1.24
R3HDM1-218ENST00000487294 DGKGP49619 791 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms