RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ZNF574Q6ZN55 896 aaPredicted RBP6.84□□□□□ -1.31
SNRNP27-204ENST00000487029 AGBL5Q8NDL9 886 aa6.84□□□□□ -1.31
SNRNP27-204ENST00000487029 ACTL7BQ9Y614 415 aa6.84□□□□□ -1.31
SNRNP27-204ENST00000487029 METTL12A8MUP2 240 aa6.83□□□□□ -1.32
SNRNP27-204ENST00000487029 GSTM4Q03013 218 aa6.83□□□□□ -1.32
SNRNP27-204ENST00000487029 SPRED2Q7Z698 418 aa6.83□□□□□ -1.32
SNRNP27-204ENST00000487029 ASAP3Q8TDY4 903 aa6.83□□□□□ -1.32
SNRNP27-204ENST00000487029 CLP1Q92989 425 aaKnown RBP6.83□□□□□ -1.32
SNRNP27-204ENST00000487029 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
SNRNP27-204ENST00000487029 LATS2Q9NRM7 1088 aa6.83□□□□□ -1.32
SNRNP27-204ENST00000487029 ARID3CA6NKF2 412 aa6.82□□□□□ -1.32
SNRNP27-204ENST00000487029 ADH5P11766 374 aa6.82□□□□□ -1.32
SNRNP27-204ENST00000487029 PEAR1Q5VY43 1037 aaPredicted RBP6.82□□□□□ -1.32
SNRNP27-204ENST00000487029 BCL7CQ8WUZ0 217 aaPredicted RBP6.82□□□□□ -1.32
SNRNP27-204ENST00000487029 SEMA6CQ9H3T2 930 aa6.82□□□□□ -1.32
SNRNP27-204ENST00000487029 C1orf115Q9H7X2 142 aa6.82□□□□□ -1.32
SNRNP27-204ENST00000487029 DYNC1LI2O43237 492 aaPredicted RBP6.81□□□□□ -1.32
SNRNP27-204ENST00000487029 RPLP1P05386 114 aaKnown RBP6.81□□□□□ -1.32
SNRNP27-204ENST00000487029 RAB6AP20340 208 aa6.81□□□□□ -1.32
SNRNP27-204ENST00000487029 SPOCD1Q6ZMY3 1216 aa6.81□□□□□ -1.32
SNRNP27-204ENST00000487029 BHLHE41Q9C0J9 482 aaPredicted RBP6.81□□□□□ -1.32
SNRNP27-204ENST00000487029 ATG7O95352 703 aa6.8□□□□□ -1.32
SNRNP27-204ENST00000487029 ZNF792Q3KQV3 632 aa6.8□□□□□ -1.32
SNRNP27-204ENST00000487029 DUSP27Q5VZP5 1158 aa6.8□□□□□ -1.32
SNRNP27-204ENST00000487029 SEZ6L2Q6UXD5 910 aa6.8□□□□□ -1.32
SNRNP27-204ENST00000487029 PMEPA1Q969W9 287 aa6.8□□□□□ -1.32
SNRNP27-204ENST00000487029 C1GALT1Q9NS00 363 aa6.8□□□□□ -1.32
SNRNP27-204ENST00000487029 FAM105AQ9NUU6 356 aa6.8□□□□□ -1.32
SNRNP27-204ENST00000487029 FOXD3Q9UJU5 478 aaPredicted RBP6.8□□□□□ -1.32
SNRNP27-204ENST00000487029 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 TNFRSF21O75509 655 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 ECEL1O95672 775 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 MZF1P28698 734 aaPredicted RBP6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 BNIP3Q12983 259 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 PLCL1Q15111 1095 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 FBLN7Q53RD9 439 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 HOMEZQ8IX15 550 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 KRTAP4-11Q9BYQ6 195 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 ACSS3Q9H6R3 686 aa6.79□□□□□ -1.32
SNRNP27-204ENST00000487029 MAOBP27338 520 aa6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 EIF1AXP47813 144 aaKnown RBP6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 ZNF423Q2M1K9 1284 aa6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 NOM1Q5C9Z4 860 aaKnown RBP6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 DYMQ7RTS9 669 aa6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 HELQQ8TDG4 1101 aa6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 YIPF2Q9BWQ6 316 aa6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 POLIQ9UNA4 740 aa6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
SNRNP27-204ENST00000487029 DBX1A6NMT0 343 aa6.77□□□□□ -1.33
SNRNP27-204ENST00000487029 PHACTR2O75167 634 aa6.77□□□□□ -1.33
SNRNP27-204ENST00000487029 EDN3P14138 238 aa6.77□□□□□ -1.33
SNRNP27-204ENST00000487029 ATP2B4P23634 1241 aa6.77□□□□□ -1.33
SNRNP27-204ENST00000487029 MPSTP25325 297 aa6.77□□□□□ -1.33
SNRNP27-204ENST00000487029 AKAP4Q5JQC9 854 aa6.77□□□□□ -1.33
SNRNP27-204ENST00000487029 ARID3AQ99856 593 aa6.77□□□□□ -1.33
SNRNP27-204ENST00000487029 LGR6Q9HBX8 967 aa6.77□□□□□ -1.33
SNRNP27-204ENST00000487029 PCSK2P16519 638 aa6.76□□□□□ -1.33
SNRNP27-204ENST00000487029 MTMR3Q13615 1198 aa6.76□□□□□ -1.33
SNRNP27-204ENST00000487029 MAP7Q14244 749 aa6.76□□□□□ -1.33
SNRNP27-204ENST00000487029 CCDC82Q8N4S0 544 aa6.76□□□□□ -1.33
SNRNP27-204ENST00000487029 ADAMTS6Q9UKP5 1117 aa6.76□□□□□ -1.33
SNRNP27-204ENST00000487029 CYP27A1Q02318 531 aa6.75□□□□□ -1.33
SNRNP27-204ENST00000487029 SPRED3Q2MJR0 410 aa6.75□□□□□ -1.33
SNRNP27-204ENST00000487029 OGFOD3Q6PK18 319 aa6.75□□□□□ -1.33
SNRNP27-204ENST00000487029 GLIS3Q8NEA6 775 aa6.75□□□□□ -1.33
SNRNP27-204ENST00000487029 GSX1Q9H4S2 264 aaPredicted RBP6.75□□□□□ -1.33
SNRNP27-204ENST00000487029 U3KQE9 123 aa6.75□□□□□ -1.33
SNRNP27-204ENST00000487029 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 POLR3DP05423 398 aaPredicted RBP6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 CD8BP10966 210 aa6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 CD96P40200 585 aa6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 PCDH1Q08174 1060 aa6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 PLD6Q8N2A8 252 aaKnown RBP6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 TTC16Q8NEE8 873 aa6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 TRIM56Q9BRZ2 755 aaKnown RBP6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 MBNL3Q9NUK0 354 aaKnown RBP6.74□□□□□ -1.33
SNRNP27-204ENST00000487029 A0A096LPE4 126 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 FARP2O94887 1054 aaPredicted RBP6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 RNASE1P07998 156 aaKnown RBP6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 ASPAP45381 313 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 GRIA4P48058 902 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 POU4F3Q15319 338 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 FAM181AQ8N9Y4 354 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 SNX29Q8TEQ0 813 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 CCDC97Q96F63 343 aaPredicted RBP6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 SERPINA10Q9UK55 444 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 AP4E1Q9UPM8 1137 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 DAGLAQ9Y4D2 1042 aa6.73□□□□□ -1.33
SNRNP27-204ENST00000487029 BIN1O00499 593 aa6.72□□□□□ -1.33
SNRNP27-204ENST00000487029 FUT4P22083 530 aa6.72□□□□□ -1.33
SNRNP27-204ENST00000487029 ATG4DQ86TL0 474 aaPredicted RBP6.72□□□□□ -1.33
SNRNP27-204ENST00000487029 GTF3C2Q8WUA4 911 aaPredicted RBP6.72□□□□□ -1.33
SNRNP27-204ENST00000487029 FAM168AQ92567 244 aa6.72□□□□□ -1.33
SNRNP27-204ENST00000487029 CLEC4MQ9H2X3 399 aaPredicted RBP6.72□□□□□ -1.33
SNRNP27-204ENST00000487029 PPP1R9AQ9ULJ8 1098 aa6.72□□□□□ -1.33
SNRNP27-204ENST00000487029 AMOTL2Q9Y2J4 779 aa6.72□□□□□ -1.33
SNRNP27-204ENST00000487029 CYP11A1P05108 521 aa6.71□□□□□ -1.34
SNRNP27-204ENST00000487029 CCNJLQ8IV13 435 aa6.71□□□□□ -1.34
SNRNP27-204ENST00000487029 TCF12Q99081 682 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms